Experiment: m.b. Cholin acetate 153.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_750 and HP15_751 are separated by 232 nucleotides HP15_751 and HP15_752 are separated by 10 nucleotides HP15_752 and HP15_753 are separated by 5 nucleotides
HP15_750: HP15_750 - ornithine carbamoyltransferase, at 759,709 to 760,623
_750
HP15_751: HP15_751 - monothiol glutaredoxin, at 760,856 to 761,188
_751
HP15_752: HP15_752 - protein containing TonB, C-terminal domain, at 761,199 to 761,951
_752
HP15_753: HP15_753 - protein containing DUF1631, at 761,957 to 764,188
_753
Position (kb) 761
762 Strain fitness (log2 ratio) -1
0
1 at 760.508 kb on - strand, within HP15_750 at 760.746 kb on - strand at 760.760 kb on - strand at 761.176 kb on + strand at 761.205 kb on - strand at 761.231 kb on + strand at 761.363 kb on - strand, within HP15_752 at 761.418 kb on + strand, within HP15_752 at 761.480 kb on + strand, within HP15_752 at 761.488 kb on - strand, within HP15_752 at 761.586 kb on - strand, within HP15_752 at 761.722 kb on - strand, within HP15_752 at 761.748 kb on - strand, within HP15_752 at 761.748 kb on - strand, within HP15_752 at 761.748 kb on - strand, within HP15_752 at 761.789 kb on - strand, within HP15_752 at 761.836 kb on + strand, within HP15_752 at 761.869 kb on - strand, within HP15_752 at 761.900 kb on + strand at 761.964 kb on + strand at 762.264 kb on + strand, within HP15_753 at 762.264 kb on + strand at 762.355 kb on - strand, within HP15_753 at 762.444 kb on - strand, within HP15_753 at 762.701 kb on - strand, within HP15_753 at 762.878 kb on - strand, within HP15_753
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM remove 760,508 - HP15_750 0.87 -0.3 760,746 - -0.3 760,760 - +0.2 761,176 + +0.3 761,205 - +0.4 761,231 + -0.5 761,363 - HP15_752 0.22 +0.9 761,418 + HP15_752 0.29 +0.6 761,480 + HP15_752 0.37 +1.1 761,488 - HP15_752 0.38 -1.0 761,586 - HP15_752 0.51 +1.7 761,722 - HP15_752 0.69 -1.3 761,748 - HP15_752 0.73 +0.2 761,748 - HP15_752 0.73 -0.1 761,748 - HP15_752 0.73 +0.6 761,789 - HP15_752 0.78 -0.5 761,836 + HP15_752 0.85 +0.2 761,869 - HP15_752 0.89 -1.5 761,900 + -0.6 761,964 + +0.5 762,264 + HP15_753 0.14 -0.3 762,264 + +1.2 762,355 - HP15_753 0.18 +0.7 762,444 - HP15_753 0.22 -0.1 762,701 - HP15_753 0.33 +0.2 762,878 - HP15_753 0.41 -1.2
Or see this region's nucleotide sequence