Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18240

Experiment: m.b. Chloride 600 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloride 600 mM
1,906,175	-		PGA1_c18210	0.61	-2.0
1,906,175	-		PGA1_c18210	0.61	+0.5
1,906,193	-		PGA1_c18210	0.63	+1.8
1,906,196	+		PGA1_c18210	0.63	+0.5
1,906,223	-		PGA1_c18210	0.66	-0.5
1,906,237	-		PGA1_c18210	0.67	+0.4
1,906,242	-		PGA1_c18210	0.68	+2.0
1,906,265	+		PGA1_c18210	0.70	+1.1
1,906,315	-		PGA1_c18210	0.75	-0.1
1,906,317	-		PGA1_c18210	0.75	-0.7
1,906,331	+		PGA1_c18210	0.76	+1.7
1,906,334	-		PGA1_c18210	0.77	-1.0
1,906,334	-		PGA1_c18210	0.77	+0.4
1,906,354	+		PGA1_c18210	0.79	-0.2
1,906,366	-		PGA1_c18210	0.80	-1.7
1,906,374	+		PGA1_c18210	0.81	+0.0
1,906,420	+		PGA1_c18210	0.85	+0.7
1,906,434	+		PGA1_c18210	0.87	+0.1
1,906,442	-		PGA1_c18210	0.87	-1.4
1,906,444	+		PGA1_c18210	0.88	-0.0
1,906,454	-		PGA1_c18210	0.89	+1.5
1,906,565	-				-0.6
1,906,657	+		PGA1_c18220	0.44	-0.9
1,906,657	+		PGA1_c18220	0.44	+0.5
1,906,657	+		PGA1_c18220	0.44	-1.3
1,906,696	-		PGA1_c18220	0.62	+2.0
1,906,707	+				+1.7
1,906,745	-		PGA1_c18220	0.84	-3.3
1,906,747	+		PGA1_c18220	0.85	+0.6
1,906,747	+		PGA1_c18220	0.85	+1.0
1,906,747	+		PGA1_c18220	0.85	+0.7
1,906,755	-				-2.4
1,906,755	-				+0.2
1,906,757	+				-0.4
1,906,757	+				-1.3
1,906,757	+				+0.3
1,906,757	+				-0.5
1,906,757	+				-1.2
1,906,757	+				-2.3
1,906,763	-				+0.6
1,906,765	-				+0.7
1,906,765	-				-1.9
1,906,884	+		PGA1_c18230	0.33	+0.0
1,906,892	-		PGA1_c18230	0.35	+0.6
1,906,898	-		PGA1_c18230	0.36	+1.1
1,906,956	+		PGA1_c18230	0.50	-0.0
1,906,956	+		PGA1_c18230	0.50	+0.0
1,906,963	-		PGA1_c18230	0.52	+0.9
1,906,963	-		PGA1_c18230	0.52	-0.2
1,907,052	-		PGA1_c18230	0.74	+1.3
1,907,055	+		PGA1_c18230	0.74	+0.3
1,907,063	-		PGA1_c18230	0.76	-3.0
1,907,063	-		PGA1_c18230	0.76	-2.3
1,907,094	+		PGA1_c18230	0.84	+0.1
1,907,129	-				+0.6
1,907,131	+				-1.2
1,907,218	-				+0.7
1,907,218	-				+0.6
1,907,234	+				+0.6
1,907,274	+				+0.3
1,907,293	-				-0.7
1,907,322	+				-2.9
1,907,335	-				+2.2
1,907,335	-				-0.8
1,907,337	+				+0.3
1,907,345	-				+1.1
1,907,368	-				+0.8
1,907,466	-		PGA1_c18240	0.12	+0.6
1,907,537	+		PGA1_c18240	0.15	+2.7
1,907,545	+		PGA1_c18240	0.15	+1.4
1,907,613	+		PGA1_c18240	0.18	+1.7
1,907,650	+		PGA1_c18240	0.20	-0.7
1,907,653	-		PGA1_c18240	0.20	-1.1
1,907,653	-		PGA1_c18240	0.20	-0.7
1,907,684	+		PGA1_c18240	0.21	+1.1
1,907,706	+		PGA1_c18240	0.22	+0.9
1,907,780	+		PGA1_c18240	0.25	-0.0
1,907,780	+		PGA1_c18240	0.25	-1.9
1,907,780	+		PGA1_c18240	0.25	+0.7
1,907,860	+		PGA1_c18240	0.28	+0.4
1,907,873	-		PGA1_c18240	0.29	+0.9
1,907,873	-		PGA1_c18240	0.29	+0.7
1,907,939	+		PGA1_c18240	0.31	+0.6
1,907,940	+		PGA1_c18240	0.31	+1.4
1,907,947	-		PGA1_c18240	0.32	+0.8
1,907,947	-		PGA1_c18240	0.32	+0.1
1,907,956	+		PGA1_c18240	0.32	+0.8
1,907,964	-		PGA1_c18240	0.32	+0.2
1,907,964	-		PGA1_c18240	0.32	+0.7
1,907,984	+		PGA1_c18240	0.33	+0.2
1,907,995	+		PGA1_c18240	0.33	-3.0
1,907,998	-		PGA1_c18240	0.34	-1.3
1,908,034	+		PGA1_c18240	0.35	-1.4
1,908,042	-		PGA1_c18240	0.35	+0.6
1,908,042	-		PGA1_c18240	0.35	+2.0
1,908,042	-		PGA1_c18240	0.35	-0.3
1,908,048	-		PGA1_c18240	0.36	+1.0
1,908,063	+		PGA1_c18240	0.36	+1.3
1,908,071	-		PGA1_c18240	0.37	-0.4
1,908,071	-		PGA1_c18240	0.37	+0.8
1,908,086	-		PGA1_c18240	0.37	-1.2
1,908,123	+		PGA1_c18240	0.39	+1.1
1,908,233	+		PGA1_c18240	0.43	+1.1
1,908,242	-		PGA1_c18240	0.43	+0.1
1,908,251	+		PGA1_c18240	0.44	-2.4
1,908,348	-		PGA1_c18240	0.48	-0.4
1,908,376	+		PGA1_c18240	0.49	-0.1
1,908,384	-		PGA1_c18240	0.49	+2.6
1,908,384	-		PGA1_c18240	0.49	+1.3
1,908,392	+		PGA1_c18240	0.49	-0.5
1,908,451	+		PGA1_c18240	0.52	+0.3
1,908,546	+		PGA1_c18240	0.56	+0.7
1,908,585	-		PGA1_c18240	0.57	-1.7
1,908,606	-		PGA1_c18240	0.58	-2.9
1,908,608	+		PGA1_c18240	0.58	+1.4
1,908,753	+		PGA1_c18240	0.64	+0.2
1,908,810	+		PGA1_c18240	0.66	+0.3
1,908,810	+		PGA1_c18240	0.66	-0.7
1,908,873	+		PGA1_c18240	0.69	+0.4
1,908,900	-		PGA1_c18240	0.70	+0.5
1,908,944	-		PGA1_c18240	0.72	-0.2
1,908,944	-		PGA1_c18240	0.72	+0.3
1,908,946	-		PGA1_c18240	0.72	+0.3
1,908,946	-		PGA1_c18240	0.72	-0.0
1,908,970	+		PGA1_c18240	0.73	-0.8
1,908,994	-		PGA1_c18240	0.74	-0.4
1,909,029	-		PGA1_c18240	0.75	-2.9
1,909,162	+		PGA1_c18240	0.80	+0.9
1,909,200	+		PGA1_c18240	0.82	-0.1
1,909,282	+		PGA1_c18240	0.85	-0.2
1,909,344	+		PGA1_c18240	0.88	+0.8
1,909,387	-		PGA1_c18240	0.89	+0.8
1,909,423	+				-2.7
1,909,423	+				+0.1
1,909,482	+				+0.4
1,909,539	-				+1.1
1,909,569	+				-0.4
1,909,582	-				-1.0
1,909,582	-				-0.3
1,909,632	+				-0.6
1,909,680	-				-1.0
1,909,696	+				+0.5
1,909,745	+				-0.4
1,909,745	+				-0.6
1,909,753	-				-2.2
1,909,804	+		PGA1_c18250	0.12	-1.0
1,909,813	-		PGA1_c18250	0.15	-1.7
1,909,813	-		PGA1_c18250	0.15	+0.1
1,909,879	+		PGA1_c18250	0.37	-0.7
1,909,941	-		PGA1_c18250	0.59	+2.4
1,909,941	-		PGA1_c18250	0.59	+0.1
1,909,941	-		PGA1_c18250	0.59	+0.4
1,909,948	+		PGA1_c18250	0.61	+1.1
1,909,956	+		PGA1_c18250	0.64	+0.1
1,909,957	-		PGA1_c18250	0.64	+0.8
1,910,029	+		PGA1_c18250	0.88	+0.1
1,910,030	+		PGA1_c18250	0.89	-2.2
1,910,030	+		PGA1_c18250	0.89	+0.3
1,910,035	+				-0.5
1,910,035	+				+1.4
1,910,035	+				+1.0
1,910,037	-				+2.0
1,910,043	-				+2.7
1,910,043	-				-1.8
1,910,083	-				+0.5
1,910,086	-				-1.6
1,910,086	-				-0.3
1,910,093	+				+1.0
1,910,101	-				-1.3
1,910,196	-		PGA1_c18260	0.24	-0.8
1,910,206	+		PGA1_c18260	0.26	-0.2
1,910,295	-		PGA1_c18260	0.44	-0.1
1,910,344	-		PGA1_c18260	0.54	-0.4
1,910,344	-		PGA1_c18260	0.54	+1.1
1,910,395	+		PGA1_c18260	0.64	-0.4
1,910,465	+		PGA1_c18260	0.78	-2.8
1,910,582	-				+0.2
1,910,589	-				+0.7
1,910,589	-				+1.5
1,910,608	+				-0.0
1,910,613	+				-0.4
1,910,621	-				-0.4
1,910,642	+				+1.5
1,910,642	+				-1.7
1,910,650	-				+0.8
1,910,650	-				-2.4
1,910,650	-				+0.9