Strain Fitness in Marinobacter adhaerens HP15 around HP15_1662

Experiment: m.b. Cholin acetate 153.15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1659 and HP15_1660 are separated by 16 nucleotidesHP15_1660 and HP15_1661 are separated by 195 nucleotidesHP15_1661 and HP15_1662 are separated by 58 nucleotidesHP15_1662 and HP15_1663 are separated by 321 nucleotides HP15_1659: HP15_1659 - hypothetical protein, at 1,753,751 to 1,753,873 _1659 HP15_1660: HP15_1660 - hypothetical protein, at 1,753,890 to 1,754,024 _1660 HP15_1661: HP15_1661 - hydrolase-like protein, at 1,754,220 to 1,754,540 _1661 HP15_1662: HP15_1662 - conserved hypothetical protein, secreted, at 1,754,599 to 1,754,850 _1662 HP15_1663: HP15_1663 - conserved hypothetical protein, at 1,755,172 to 1,756,167 _1663 Position (kb) 1754 1755Strain fitness (log2 ratio) -1 0 1at 1753.749 kb on + strandat 1753.858 kb on + strand, within HP15_1659at 1753.858 kb on + strand, within HP15_1659at 1753.984 kb on - strand, within HP15_1660at 1753.994 kb on - strand, within HP15_1660at 1754.289 kb on + strand, within HP15_1661at 1754.412 kb on + strand, within HP15_1661at 1754.417 kb on + strand, within HP15_1661at 1754.465 kb on - strand, within HP15_1661at 1754.465 kb on - strand, within HP15_1661at 1754.548 kb on - strandat 1754.585 kb on - strandat 1754.653 kb on - strand, within HP15_1662at 1754.668 kb on - strand, within HP15_1662at 1754.668 kb on - strand, within HP15_1662at 1754.730 kb on - strand, within HP15_1662at 1754.743 kb on - strand, within HP15_1662at 1754.929 kb on + strandat 1754.929 kb on + strandat 1754.934 kb on + strandat 1755.004 kb on - strandat 1755.249 kb on + strandat 1755.347 kb on - strand, within HP15_1663at 1755.350 kb on + strand, within HP15_1663at 1755.363 kb on - strand, within HP15_1663at 1755.365 kb on + strand, within HP15_1663at 1755.365 kb on + strand, within HP15_1663at 1755.481 kb on + strand, within HP15_1663at 1755.512 kb on + strand, within HP15_1663at 1755.520 kb on - strand, within HP15_1663at 1755.585 kb on - strand, within HP15_1663at 1755.599 kb on + strand, within HP15_1663at 1755.631 kb on + strand, within HP15_1663at 1755.631 kb on + strand, within HP15_1663at 1755.633 kb on - strand, within HP15_1663at 1755.633 kb on - strand, within HP15_1663at 1755.642 kb on + strand, within HP15_1663at 1755.650 kb on + strand, within HP15_1663

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM
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1,753,749 + -0.4
1,753,858 + HP15_1659 0.87 -0.8
1,753,858 + HP15_1659 0.87 -0.7
1,753,984 - HP15_1660 0.70 +0.1
1,753,994 - HP15_1660 0.77 -0.4
1,754,289 + HP15_1661 0.21 +0.6
1,754,412 + HP15_1661 0.60 -0.4
1,754,417 + HP15_1661 0.61 +0.4
1,754,465 - HP15_1661 0.76 +0.5
1,754,465 - HP15_1661 0.76 -0.1
1,754,548 - -0.3
1,754,585 - -0.3
1,754,653 - HP15_1662 0.21 -0.4
1,754,668 - HP15_1662 0.27 -0.3
1,754,668 - HP15_1662 0.27 -0.3
1,754,730 - HP15_1662 0.52 -0.1
1,754,743 - HP15_1662 0.57 -1.2
1,754,929 + +0.2
1,754,929 + -0.2
1,754,934 + -0.9
1,755,004 - -1.6
1,755,249 + -1.2
1,755,347 - HP15_1663 0.18 -0.9
1,755,350 + HP15_1663 0.18 -0.1
1,755,363 - HP15_1663 0.19 -1.1
1,755,365 + HP15_1663 0.19 +0.1
1,755,365 + HP15_1663 0.19 -0.1
1,755,481 + HP15_1663 0.31 -0.2
1,755,512 + HP15_1663 0.34 -0.4
1,755,520 - HP15_1663 0.35 +0.1
1,755,585 - HP15_1663 0.41 +0.2
1,755,599 + HP15_1663 0.43 -0.2
1,755,631 + HP15_1663 0.46 +0.3
1,755,631 + HP15_1663 0.46 -1.1
1,755,633 - HP15_1663 0.46 +0.1
1,755,633 - HP15_1663 0.46 -0.4
1,755,642 + HP15_1663 0.47 +0.6
1,755,650 + HP15_1663 0.48 +0.8

Or see this region's nucleotide sequence