Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0734 and Psest_0735 are separated by 248 nucleotides Psest_0735 and Psest_0736 are separated by 49 nucleotides Psest_0736 and Psest_0737 are separated by 189 nucleotides Psest_0737 and Psest_0738 are separated by 13 nucleotides
Psest_0734: Psest_0734 - RND family efflux transporter, MFP subunit, at 806,298 to 807,377
_0734
Psest_0735: Psest_0735 - bacterioferritin, at 807,626 to 808,093
_0735
Psest_0736: Psest_0736 - Methyl-accepting chemotaxis protein, at 808,143 to 810,065
_0736
Psest_0737: Psest_0737 - Cu(I)-responsive transcriptional regulator, at 810,255 to 810,698
_0737
Psest_0738: Psest_0738 - copper-(or silver)-translocating P-type ATPase, at 810,712 to 813,090
_0738
Position (kb) 808
809
810
811 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 807.436 kb on + strand at 807.436 kb on + strand at 807.437 kb on - strand at 807.437 kb on - strand at 807.437 kb on - strand at 807.595 kb on + strand at 807.595 kb on + strand at 807.621 kb on - strand at 807.654 kb on - strand at 807.699 kb on - strand, within Psest_0735 at 807.699 kb on - strand, within Psest_0735 at 807.719 kb on + strand, within Psest_0735 at 807.720 kb on - strand, within Psest_0735 at 807.720 kb on - strand, within Psest_0735 at 807.720 kb on - strand, within Psest_0735 at 807.746 kb on + strand, within Psest_0735 at 807.746 kb on + strand, within Psest_0735 at 807.746 kb on + strand, within Psest_0735 at 807.746 kb on + strand, within Psest_0735 at 807.747 kb on - strand, within Psest_0735 at 807.798 kb on + strand, within Psest_0735 at 807.798 kb on + strand, within Psest_0735 at 807.798 kb on + strand, within Psest_0735 at 807.905 kb on + strand, within Psest_0735 at 807.905 kb on + strand, within Psest_0735 at 807.905 kb on + strand, within Psest_0735 at 807.906 kb on - strand, within Psest_0735 at 807.906 kb on - strand, within Psest_0735 at 807.906 kb on - strand, within Psest_0735 at 807.906 kb on - strand, within Psest_0735 at 808.020 kb on - strand, within Psest_0735 at 808.070 kb on + strand at 808.071 kb on - strand at 808.113 kb on + strand at 808.113 kb on + strand at 808.113 kb on + strand at 808.113 kb on + strand at 808.430 kb on + strand, within Psest_0736 at 808.430 kb on + strand, within Psest_0736 at 808.430 kb on + strand, within Psest_0736 at 808.431 kb on - strand, within Psest_0736 at 809.112 kb on - strand, within Psest_0736 at 809.356 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.498 kb on + strand, within Psest_0736 at 809.498 kb on + strand, within Psest_0736 at 809.499 kb on - strand, within Psest_0736 at 809.500 kb on + strand, within Psest_0736 at 809.500 kb on + strand, within Psest_0736 at 809.500 kb on + strand, within Psest_0736 at 809.501 kb on - strand, within Psest_0736 at 809.501 kb on - strand, within Psest_0736 at 809.501 kb on - strand, within Psest_0736 at 809.501 kb on - strand, within Psest_0736 at 809.501 kb on - strand at 809.501 kb on - strand, within Psest_0736 at 809.516 kb on - strand, within Psest_0736 at 809.516 kb on - strand, within Psest_0736 at 809.516 kb on - strand, within Psest_0736 at 809.584 kb on + strand, within Psest_0736 at 809.585 kb on - strand, within Psest_0736 at 809.585 kb on - strand, within Psest_0736 at 809.686 kb on + strand, within Psest_0736 at 809.686 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.810 kb on - strand, within Psest_0736 at 809.810 kb on - strand, within Psest_0736 at 809.810 kb on - strand, within Psest_0736 at 810.059 kb on + strand at 810.059 kb on + strand at 810.059 kb on + strand at 810.059 kb on + strand at 810.059 kb on + strand at 810.060 kb on - strand at 810.060 kb on - strand at 810.077 kb on + strand at 810.077 kb on + strand at 810.078 kb on - strand at 810.078 kb on - strand at 810.078 kb on - strand at 810.078 kb on - strand at 810.078 kb on - strand at 810.084 kb on + strand at 810.084 kb on + strand at 810.084 kb on + strand at 810.084 kb on + strand at 810.085 kb on - strand at 810.085 kb on - strand at 810.085 kb on - strand at 810.152 kb on - strand at 810.165 kb on + strand at 810.165 kb on + strand at 810.166 kb on - strand at 810.166 kb on - strand at 810.166 kb on - strand at 810.641 kb on - strand, within Psest_0737 at 810.757 kb on + strand at 810.845 kb on + strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.005 mg/ml remove 807,436 + -0.1 807,436 + +0.0 807,437 - -0.1 807,437 - +2.2 807,437 - +2.2 807,595 + -1.1 807,595 + -1.3 807,621 - +2.2 807,654 - -0.6 807,699 - Psest_0735 0.16 +1.2 807,699 - Psest_0735 0.16 -0.8 807,719 + Psest_0735 0.20 -1.2 807,720 - Psest_0735 0.20 +0.1 807,720 - Psest_0735 0.20 +0.6 807,720 - Psest_0735 0.20 -1.4 807,746 + Psest_0735 0.26 -1.1 807,746 + Psest_0735 0.26 +3.2 807,746 + Psest_0735 0.26 +0.5 807,746 + Psest_0735 0.26 +0.4 807,747 - Psest_0735 0.26 -0.3 807,798 + Psest_0735 0.37 -0.2 807,798 + Psest_0735 0.37 -0.8 807,798 + Psest_0735 0.37 -0.5 807,905 + Psest_0735 0.60 +0.6 807,905 + Psest_0735 0.60 +0.4 807,905 + Psest_0735 0.60 -0.8 807,906 - Psest_0735 0.60 +2.2 807,906 - Psest_0735 0.60 +0.7 807,906 - Psest_0735 0.60 -0.4 807,906 - Psest_0735 0.60 -2.3 808,020 - Psest_0735 0.84 +0.4 808,070 + +2.2 808,071 - +0.2 808,113 + -0.6 808,113 + -0.1 808,113 + +1.2 808,113 + -0.1 808,430 + Psest_0736 0.15 -0.8 808,430 + Psest_0736 0.15 +0.0 808,430 + Psest_0736 0.15 +0.1 808,431 - Psest_0736 0.15 -0.8 809,112 - Psest_0736 0.50 -0.9 809,356 + Psest_0736 0.63 -0.6 809,461 + Psest_0736 0.69 -0.4 809,461 + Psest_0736 0.69 +0.6 809,461 + Psest_0736 0.69 -1.5 809,461 + Psest_0736 0.69 +0.2 809,461 + Psest_0736 0.69 +0.6 809,461 + Psest_0736 0.69 -0.7 809,461 + Psest_0736 0.69 +0.5 809,461 + Psest_0736 0.69 +0.2 809,461 + Psest_0736 0.69 +0.6 809,462 - Psest_0736 0.69 +0.3 809,462 - Psest_0736 0.69 +0.2 809,462 - Psest_0736 0.69 -0.1 809,462 - Psest_0736 0.69 -0.8 809,462 - Psest_0736 0.69 +1.2 809,462 - Psest_0736 0.69 -0.1 809,498 + Psest_0736 0.70 +0.9 809,498 + Psest_0736 0.70 -2.4 809,499 - Psest_0736 0.71 +0.3 809,500 + Psest_0736 0.71 -0.4 809,500 + Psest_0736 0.71 +0.6 809,500 + Psest_0736 0.71 +2.2 809,501 - Psest_0736 0.71 -0.6 809,501 - Psest_0736 0.71 -0.1 809,501 - Psest_0736 0.71 -0.6 809,501 - Psest_0736 0.71 -0.0 809,501 - +0.6 809,501 - Psest_0736 0.71 -1.0 809,516 - Psest_0736 0.71 -0.6 809,516 - Psest_0736 0.71 +1.2 809,516 - Psest_0736 0.71 +0.8 809,584 + Psest_0736 0.75 +1.5 809,585 - Psest_0736 0.75 +0.9 809,585 - Psest_0736 0.75 +0.1 809,686 + Psest_0736 0.80 -0.8 809,686 + Psest_0736 0.80 -0.0 809,809 + Psest_0736 0.87 -1.4 809,809 + Psest_0736 0.87 -0.2 809,809 + Psest_0736 0.87 +0.2 809,809 + Psest_0736 0.87 -0.6 809,809 + Psest_0736 0.87 -0.8 809,810 - Psest_0736 0.87 -0.4 809,810 - Psest_0736 0.87 -1.1 809,810 - Psest_0736 0.87 -0.8 810,059 + +0.9 810,059 + +0.5 810,059 + +2.8 810,059 + +0.1 810,059 + +0.4 810,060 - -0.3 810,060 - -0.8 810,077 + -0.3 810,077 + +0.2 810,078 - +0.2 810,078 - -1.1 810,078 - -0.4 810,078 - +0.7 810,078 - +0.2 810,084 + -1.0 810,084 + +0.0 810,084 + +1.8 810,084 + -0.5 810,085 - -1.3 810,085 - +0.2 810,085 - +0.2 810,152 - -0.4 810,165 + +0.4 810,165 + +0.0 810,166 - -0.3 810,166 - -1.4 810,166 - +0.5 810,641 - Psest_0737 0.87 -0.1 810,757 + +0.2 810,845 + -1.1 810,846 - +0.6 810,846 - +0.9 810,846 - -1.4 810,846 - +1.2 810,846 - +0.3 810,846 - +0.6 810,846 - +0.6 810,846 - +1.9 810,846 - -0.5
Or see this region's nucleotide sequence