Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0728 and Psest_0729 are separated by 50 nucleotides Psest_0729 and Psest_0730 are separated by 52 nucleotides Psest_0730 and Psest_0731 are separated by 157 nucleotides
Psest_0728: Psest_0728 - hydrolase, TatD family, at 798,406 to 799,191
_0728
Psest_0729: Psest_0729 - hypothetical protein, at 799,242 to 799,484
_0729
Psest_0730: Psest_0730 - O-6-methylguanine DNA methyltransferase, at 799,537 to 800,577
_0730
Psest_0731: Psest_0731 - Serine/threonine protein kinase involved in cell cycle control, at 800,735 to 801,625
_0731
Position (kb) 799
800
801 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 798.545 kb on + strand, within Psest_0728 at 798.645 kb on + strand, within Psest_0728 at 798.686 kb on + strand, within Psest_0728 at 798.686 kb on + strand, within Psest_0728 at 798.687 kb on - strand, within Psest_0728 at 798.790 kb on + strand, within Psest_0728 at 798.790 kb on + strand, within Psest_0728 at 798.790 kb on + strand, within Psest_0728 at 798.790 kb on + strand, within Psest_0728 at 798.791 kb on - strand, within Psest_0728 at 798.791 kb on - strand, within Psest_0728 at 798.791 kb on - strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.884 kb on + strand, within Psest_0728 at 798.885 kb on - strand, within Psest_0728 at 798.885 kb on - strand, within Psest_0728 at 798.885 kb on - strand, within Psest_0728 at 798.887 kb on + strand, within Psest_0728 at 798.887 kb on + strand, within Psest_0728 at 798.888 kb on - strand, within Psest_0728 at 798.888 kb on - strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.019 kb on + strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.020 kb on - strand, within Psest_0728 at 799.023 kb on + strand, within Psest_0728 at 799.023 kb on + strand, within Psest_0728 at 799.023 kb on + strand, within Psest_0728 at 799.023 kb on + strand, within Psest_0728 at 799.024 kb on - strand, within Psest_0728 at 799.024 kb on - strand, within Psest_0728 at 799.024 kb on - strand, within Psest_0728 at 799.024 kb on - strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.075 kb on + strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.076 kb on - strand, within Psest_0728 at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.232 kb on + strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.233 kb on - strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.514 kb on + strand at 799.515 kb on - strand at 799.515 kb on - strand at 799.515 kb on - strand at 799.515 kb on - strand at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.972 kb on - strand, within Psest_0730 at 799.972 kb on - strand, within Psest_0730 at 800.429 kb on + strand, within Psest_0730 at 800.429 kb on + strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.654 kb on + strand at 800.654 kb on + strand at 800.654 kb on + strand at 800.655 kb on - strand at 800.655 kb on - strand at 800.655 kb on - strand at 800.655 kb on - strand at 800.747 kb on - strand at 800.826 kb on + strand, within Psest_0731 at 800.826 kb on + strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.870 kb on + strand, within Psest_0731 at 800.871 kb on - strand, within Psest_0731 at 800.871 kb on - strand, within Psest_0731 at 800.871 kb on - strand, within Psest_0731 at 800.871 kb on - strand, within Psest_0731 at 800.912 kb on + strand, within Psest_0731 at 800.938 kb on + strand, within Psest_0731 at 800.939 kb on - strand, within Psest_0731 at 800.939 kb on - strand, within Psest_0731 at 801.240 kb on + strand, within Psest_0731 at 801.240 kb on + strand, within Psest_0731 at 801.368 kb on + strand, within Psest_0731 at 801.369 kb on - strand, within Psest_0731
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.005 mg/ml remove 798,545 + Psest_0728 0.18 -2.0 798,645 + Psest_0728 0.30 -0.8 798,686 + Psest_0728 0.36 -1.0 798,686 + Psest_0728 0.36 +0.2 798,687 - Psest_0728 0.36 +0.8 798,790 + Psest_0728 0.49 +0.8 798,790 + Psest_0728 0.49 -1.0 798,790 + Psest_0728 0.49 +0.0 798,790 + Psest_0728 0.49 +2.2 798,791 - Psest_0728 0.49 -1.1 798,791 - Psest_0728 0.49 -0.4 798,791 - Psest_0728 0.49 -0.6 798,884 + Psest_0728 0.61 -1.2 798,884 + Psest_0728 0.61 -1.0 798,884 + Psest_0728 0.61 -0.6 798,884 + Psest_0728 0.61 -0.4 798,884 + Psest_0728 0.61 +0.3 798,884 + Psest_0728 0.61 +0.5 798,884 + Psest_0728 0.61 +0.2 798,885 - Psest_0728 0.61 -0.7 798,885 - Psest_0728 0.61 +0.4 798,885 - Psest_0728 0.61 +0.1 798,887 + Psest_0728 0.61 -2.3 798,887 + Psest_0728 0.61 -1.6 798,888 - Psest_0728 0.61 -1.1 798,888 - Psest_0728 0.61 -0.8 799,019 + Psest_0728 0.78 +0.6 799,019 + Psest_0728 0.78 -1.2 799,019 + Psest_0728 0.78 -0.6 799,019 + Psest_0728 0.78 -0.5 799,019 + Psest_0728 0.78 +0.4 799,020 - Psest_0728 0.78 -1.2 799,020 - Psest_0728 0.78 +0.8 799,020 - Psest_0728 0.78 -0.7 799,020 - Psest_0728 0.78 +0.0 799,020 - Psest_0728 0.78 -1.3 799,020 - Psest_0728 0.78 -0.7 799,020 - Psest_0728 0.78 +0.1 799,023 + Psest_0728 0.78 +0.2 799,023 + Psest_0728 0.78 -0.1 799,023 + Psest_0728 0.78 -1.0 799,023 + Psest_0728 0.78 -1.4 799,024 - Psest_0728 0.79 +0.7 799,024 - Psest_0728 0.79 -0.2 799,024 - Psest_0728 0.79 -0.3 799,024 - Psest_0728 0.79 -1.0 799,075 + Psest_0728 0.85 +0.8 799,075 + Psest_0728 0.85 -2.2 799,075 + Psest_0728 0.85 -0.4 799,075 + Psest_0728 0.85 -0.6 799,075 + Psest_0728 0.85 +1.5 799,075 + Psest_0728 0.85 -0.7 799,076 - Psest_0728 0.85 +0.2 799,076 - Psest_0728 0.85 +1.4 799,076 - Psest_0728 0.85 +0.2 799,076 - Psest_0728 0.85 -0.8 799,076 - Psest_0728 0.85 +0.2 799,076 - Psest_0728 0.85 -2.0 799,076 - Psest_0728 0.85 +0.3 799,232 + +1.8 799,232 + +0.0 799,232 + +1.0 799,232 + +0.1 799,232 + -1.9 799,232 + +0.6 799,232 + -0.9 799,232 + +0.2 799,232 + -0.8 799,232 + +1.7 799,232 + +0.5 799,232 + -3.0 799,232 + -1.4 799,232 + +0.6 799,233 - -0.3 799,233 - -2.2 799,233 - +0.2 799,233 - -0.0 799,233 - +0.8 799,233 - +0.4 799,233 - +0.3 799,233 - -0.2 799,233 - -2.2 799,233 - -1.0 799,233 - -0.4 799,233 - -0.7 799,233 - -1.1 799,233 - -0.1 799,233 - -0.6 799,233 - +0.9 799,233 - -1.7 799,233 - +1.6 799,233 - -1.3 799,233 - +0.9 799,233 - +1.1 799,233 - +1.0 799,233 - -0.8 799,233 - -0.0 799,514 + +0.2 799,514 + -1.1 799,514 + +0.0 799,514 + -1.5 799,514 + +0.2 799,514 + +2.2 799,514 + -1.7 799,514 + -0.6 799,515 - -0.1 799,515 - -0.5 799,515 - -1.7 799,515 - -1.4 799,971 + Psest_0730 0.42 -1.0 799,971 + Psest_0730 0.42 +0.2 799,971 + Psest_0730 0.42 -1.1 799,971 + Psest_0730 0.42 -1.4 799,971 + Psest_0730 0.42 +0.2 799,972 - Psest_0730 0.42 -0.3 799,972 - Psest_0730 0.42 -1.3 800,429 + Psest_0730 0.86 -0.1 800,429 + Psest_0730 0.86 +1.0 800,430 - Psest_0730 0.86 +0.4 800,430 - Psest_0730 0.86 +0.6 800,430 - Psest_0730 0.86 -1.0 800,430 - Psest_0730 0.86 -0.9 800,430 - Psest_0730 0.86 -1.1 800,654 + -0.4 800,654 + +0.6 800,654 + +1.9 800,655 - +0.2 800,655 - +0.2 800,655 - -0.1 800,655 - -0.4 800,747 - +0.2 800,826 + Psest_0731 0.10 +0.4 800,826 + Psest_0731 0.10 -1.5 800,827 - Psest_0731 0.10 -0.3 800,827 - Psest_0731 0.10 -0.2 800,827 - Psest_0731 0.10 +2.2 800,827 - Psest_0731 0.10 -0.4 800,827 - Psest_0731 0.10 -0.6 800,827 - Psest_0731 0.10 +0.6 800,827 - Psest_0731 0.10 -0.7 800,827 - Psest_0731 0.10 -1.6 800,827 - Psest_0731 0.10 -1.0 800,828 + Psest_0731 0.10 +2.5 800,828 + Psest_0731 0.10 +1.5 800,828 + Psest_0731 0.10 +0.9 800,828 + Psest_0731 0.10 +0.1 800,828 + Psest_0731 0.10 +0.6 800,828 + Psest_0731 0.10 +1.4 800,828 + Psest_0731 0.10 +1.3 800,828 + Psest_0731 0.10 +0.6 800,828 + Psest_0731 0.10 +1.6 800,828 + Psest_0731 0.10 +2.2 800,828 + Psest_0731 0.10 -1.8 800,828 + Psest_0731 0.10 +0.3 800,828 + Psest_0731 0.10 -0.9 800,828 + Psest_0731 0.10 +0.5 800,828 + Psest_0731 0.10 -0.0 800,828 + Psest_0731 0.10 -0.4 800,828 + Psest_0731 0.10 +1.6 800,828 + Psest_0731 0.10 +1.0 800,828 + Psest_0731 0.10 +0.2 800,828 + Psest_0731 0.10 +0.4 800,828 + Psest_0731 0.10 +0.6 800,829 - Psest_0731 0.11 +0.0 800,829 - Psest_0731 0.11 +0.8 800,829 - Psest_0731 0.11 -0.3 800,829 - Psest_0731 0.11 -0.1 800,829 - Psest_0731 0.11 -0.1 800,829 - Psest_0731 0.11 -1.3 800,829 - Psest_0731 0.11 -0.1 800,829 - Psest_0731 0.11 +2.2 800,829 - Psest_0731 0.11 -1.9 800,829 - Psest_0731 0.11 +0.2 800,829 - Psest_0731 0.11 -1.5 800,829 - Psest_0731 0.11 +0.2 800,829 - Psest_0731 0.11 -0.4 800,829 - Psest_0731 0.11 +0.8 800,829 - Psest_0731 0.11 +1.0 800,829 - Psest_0731 0.11 +1.2 800,829 - Psest_0731 0.11 -1.6 800,829 - Psest_0731 0.11 -2.3 800,829 - Psest_0731 0.11 +0.6 800,829 - Psest_0731 0.11 -0.4 800,829 - Psest_0731 0.11 -0.5 800,829 - Psest_0731 0.11 -0.1 800,870 + Psest_0731 0.15 -0.8 800,871 - Psest_0731 0.15 -0.6 800,871 - Psest_0731 0.15 -0.4 800,871 - Psest_0731 0.15 -0.8 800,871 - Psest_0731 0.15 +1.0 800,912 + Psest_0731 0.20 +1.6 800,938 + Psest_0731 0.23 -0.1 800,939 - Psest_0731 0.23 -1.4 800,939 - Psest_0731 0.23 -0.6 801,240 + Psest_0731 0.57 +0.6 801,240 + Psest_0731 0.57 +1.2 801,368 + Psest_0731 0.71 +0.6 801,369 - Psest_0731 0.71 -0.1
Or see this region's nucleotide sequence