Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2949

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,144,309	+		Psest_2947	0.63	-1.0
3,144,310	-		Psest_2947	0.63	-0.2
3,144,420	-				-1.4
3,144,475	-				+0.8
3,144,655	-		Psest_2948	0.30	-0.5
3,144,655	-		Psest_2948	0.30	-1.5
3,144,731	-		Psest_2948	0.42	-1.0
3,144,731	-		Psest_2948	0.42	-0.7
3,144,731	-		Psest_2948	0.42	-0.8
3,144,836	+		Psest_2948	0.58	-0.5
3,144,836	+		Psest_2948	0.58	-0.6
3,144,836	+		Psest_2948	0.58	-0.8
3,144,836	+		Psest_2948	0.58	-0.7
3,144,836	+		Psest_2948	0.58	-1.5
3,144,836	+		Psest_2948	0.58	+0.6
3,144,837	-		Psest_2948	0.58	-1.2
3,144,837	-		Psest_2948	0.58	-0.8
3,144,837	-		Psest_2948	0.58	-0.2
3,144,837	-		Psest_2948	0.58	-1.0
3,144,837	-		Psest_2948	0.58	-1.5
3,144,837	-		Psest_2948	0.58	-1.3
3,144,982	+		Psest_2948	0.81	-1.2
3,144,983	-		Psest_2948	0.81	-0.5
3,144,983	-		Psest_2948	0.81	-0.8
3,145,099	+				+0.1
3,145,100	-				+0.6
3,145,100	-				-0.3
3,145,100	-				+1.7
3,145,100	-				-0.9
3,145,100	-				-1.2
3,145,100	-				-0.2
3,145,100	-				-0.4
3,145,100	-				-0.1
3,145,100	-				-1.6
3,145,102	+				-0.6
3,145,167	-				-0.6
3,145,167	-				-0.2
3,145,186	+				+1.8
3,145,187	-				+0.4
3,145,187	-				+0.3
3,145,187	-				-1.1
3,145,188	+				-0.5
3,145,188	+				+0.4
3,145,189	-				-0.6
3,145,189	-				+0.4
3,145,189	-				+0.9
3,145,189	-				-0.6
3,145,189	-				-0.4
3,145,377	+		Psest_2949	0.12	-0.5
3,145,377	+		Psest_2949	0.12	+0.2
3,145,378	-		Psest_2949	0.12	+1.7
3,145,378	-		Psest_2949	0.12	+0.6
3,145,378	-		Psest_2949	0.12	+0.2
3,145,378	-		Psest_2949	0.12	+0.7
3,145,378	-		Psest_2949	0.12	+1.4
3,145,378	-		Psest_2949	0.12	+0.7
3,145,466	+		Psest_2949	0.19	-0.2
3,145,545	+		Psest_2949	0.25	-2.5
3,145,545	+		Psest_2949	0.25	-0.5
3,145,546	-		Psest_2949	0.25	+0.0
3,145,546	-		Psest_2949	0.25	-0.7
3,145,609	-		Psest_2949	0.30	+1.5
3,145,609	-		Psest_2949	0.30	+0.2
3,145,609	-		Psest_2949	0.30	+0.0
3,145,739	-		Psest_2949	0.40	+0.8
3,145,863	+		Psest_2949	0.50	+1.4
3,146,166	+		Psest_2949	0.73	-0.9
3,146,167	-		Psest_2949	0.73	-0.6
3,146,271	+		Psest_2949	0.81	+0.2
3,146,272	-		Psest_2949	0.81	+0.2
3,146,272	-		Psest_2949	0.81	+0.1
3,146,487	+				+0.5
3,146,487	+				+1.1
3,146,487	+				+0.2
3,146,487	+				+0.7
3,146,487	+				+0.4
3,146,487	+				-2.1
3,146,487	+				+0.9
3,146,487	+				-0.4
3,146,487	+				-0.2
3,146,488	-				+0.5
3,146,488	-				-0.2
3,146,488	-				-0.1
3,146,488	-				+0.3
3,146,488	-				-0.0
3,146,488	-				+0.2
3,146,488	-				-1.5
3,146,488	-				+0.0
3,146,488	-				+0.6
3,146,488	-				-1.3
3,146,488	-				+0.9
3,146,488	-				-0.4
3,146,574	+				-0.9
3,146,575	-				+1.2
3,146,594	+				+0.1
3,146,658	+				+2.1
3,146,659	-				+1.7
3,146,659	-				+2.9
3,146,762	-		Psest_2950	0.19	+0.5
3,146,904	-		Psest_2950	0.34	+2.2
3,146,914	+		Psest_2950	0.35	+2.0
3,146,915	-		Psest_2950	0.35	-0.0
3,147,187	+		Psest_2950	0.63	+3.3
3,147,339	+		Psest_2950	0.79	+4.1
3,147,340	-		Psest_2950	0.79	+1.8
3,147,383	+		Psest_2950	0.83	+4.4