Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2864

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,053,121	+				+2.3
3,053,435	+		Psest_2863	0.33	+4.0
3,053,435	+		Psest_2863	0.33	+4.5
3,053,435	+		Psest_2863	0.33	+3.9
3,053,435	+		Psest_2863	0.33	+4.2
3,053,436	-		Psest_2863	0.33	+0.7
3,053,622	+		Psest_2863	0.54	+2.2
3,053,795	-		Psest_2863	0.72	+0.7
3,053,795	-		Psest_2863	0.72	+1.5
3,053,930	+		Psest_2863	0.87	+3.4
3,053,930	+		Psest_2863	0.87	+3.5
3,053,930	+		Psest_2863	0.87	+3.5
3,053,931	-		Psest_2863	0.87	+1.2
3,053,931	-		Psest_2863	0.87	+1.6
3,053,931	-		Psest_2863	0.87	+1.9
3,053,931	-		Psest_2863	0.87	+1.4
3,053,955	-		Psest_2863	0.89	+1.6
3,054,107	+				+0.2
3,054,107	+				-1.0
3,054,107	+				-0.1
3,054,133	+				-0.5
3,054,134	-				+0.5
3,054,134	-				+0.1
3,054,499	-		Psest_2864	0.65	-0.7
3,054,635	+		Psest_2864	0.86	+0.1
3,054,635	+		Psest_2864	0.86	-2.0
3,054,636	-		Psest_2864	0.86	+0.6
3,054,636	-		Psest_2864	0.86	-0.5
3,054,636	-		Psest_2864	0.86	+1.0
3,054,636	-		Psest_2864	0.86	-0.3
3,054,636	-		Psest_2864	0.86	+0.6
3,054,710	+				-1.4
3,054,711	-				-1.0
3,054,711	-				-1.0
3,054,711	-				+0.1
3,054,711	-				+0.4
3,054,711	-				-0.5
3,054,711	-				-1.0
3,054,747	-				+0.2
3,054,837	-				-0.8
3,054,873	+				+1.0
3,054,873	+				+0.5
3,054,873	+				-0.5
3,054,873	+				-1.8
3,054,874	-				+0.6
3,054,913	-				-0.3
3,054,913	-				-0.6
3,054,913	-				-0.5
3,054,913	-				+0.5
3,054,913	-				-0.3
3,054,913	-				-0.5
3,054,913	-				+1.5
3,054,913	-				-1.0
3,054,913	-				+0.7
3,054,934	+				-0.0
3,054,934	+				-1.1
3,054,937	-				+0.3
3,055,138	+		Psest_2865	0.18	-1.1
3,055,138	+		Psest_2865	0.18	-2.1
3,055,138	+		Psest_2865	0.18	+0.3
3,055,139	-		Psest_2865	0.18	-0.7
3,055,297	+		Psest_2865	0.36	-0.4
3,055,310	+		Psest_2865	0.37	-0.2
3,055,512	+		Psest_2865	0.59	-1.1
3,055,512	+		Psest_2865	0.59	+0.1
3,055,627	+		Psest_2865	0.72	+0.9
3,055,627	+		Psest_2865	0.72	+0.8
3,055,627	+		Psest_2865	0.72	-0.3
3,055,627	+		Psest_2865	0.72	+0.6
3,055,627	+		Psest_2865	0.72	-0.4
3,055,628	-		Psest_2865	0.72	+1.0
3,055,658	-		Psest_2865	0.75	+0.5
3,055,659	+		Psest_2865	0.75	-0.3
3,055,659	+		Psest_2865	0.75	-0.6
3,055,659	+		Psest_2865	0.75	+0.5
3,055,660	-		Psest_2865	0.75	+0.3
3,055,660	-		Psest_2865	0.75	+0.5
3,055,660	-		Psest_2865	0.75	+0.1