Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1596

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,698,076	-		Psest_1594	0.68	-0.5
1,698,100	+		Psest_1594	0.73	+0.8
1,698,100	+		Psest_1594	0.73	-0.7
1,698,100	+		Psest_1594	0.73	-0.2
1,698,100	+		Psest_1594	0.73	+0.4
1,698,100	+		Psest_1594	0.73	+1.4
1,698,101	-		Psest_1594	0.74	-0.4
1,698,208	+				-1.7
1,698,208	+				+0.1
1,698,209	-				+0.9
1,698,209	-				-0.0
1,698,244	+				-0.2
1,698,272	+		Psest_1595	0.13	-0.4
1,698,558	+				-0.2
1,698,559	-				+0.3
1,698,627	+				-1.7
1,698,627	+				-1.0
1,698,692	+				+0.8
1,698,693	-				-0.2
1,698,696	+				+0.8
1,698,697	-				+2.1
1,698,714	-				+0.2
1,698,836	+				-1.2
1,698,837	-				+0.5
1,698,837	-				-0.6
1,698,837	-				-1.4
1,698,837	-				-0.9
1,698,837	-				+0.6
1,698,964	+				-1.0
1,698,964	+				+0.5
1,698,965	-				-0.1
1,698,976	+				-0.3
1,698,977	-				-1.0
1,698,977	-				-0.4
1,698,977	-				-0.5
1,698,977	-				-0.9
1,699,199	+				-0.2
1,699,237	+		Psest_1596	0.10	-2.0
1,699,238	-		Psest_1596	0.10	+1.0
1,699,489	-		Psest_1596	0.20	-1.1
1,699,514	-		Psest_1596	0.21	+0.9
1,699,591	-		Psest_1596	0.24	-0.1
1,699,732	-		Psest_1596	0.30	-1.4
1,699,756	+		Psest_1596	0.31	-1.1
1,699,756	+		Psest_1596	0.31	-0.6
1,699,757	-		Psest_1596	0.31	-1.4
1,699,757	-		Psest_1596	0.31	+0.1
1,699,757	-		Psest_1596	0.31	+0.4
1,700,005	+		Psest_1596	0.41	-0.5
1,700,005	+		Psest_1596	0.41	+0.3
1,700,005	+		Psest_1596	0.41	-0.7
1,700,006	-		Psest_1596	0.41	-1.1
1,700,061	+		Psest_1596	0.43	-1.7
1,700,083	+		Psest_1596	0.44	-1.9
1,700,593	+		Psest_1596	0.64	-1.5
1,700,783	+		Psest_1596	0.72	-0.5
1,700,783	+		Psest_1596	0.72	+0.1
1,700,784	-		Psest_1596	0.72	-0.3
1,700,784	-		Psest_1596	0.72	-1.2
1,701,282	+				+0.2
1,701,282	+				+0.1
1,701,282	+				+0.6
1,701,282	+				-1.6
1,701,282	+				-0.9
1,701,282	+				+0.1
1,701,282	+				-0.6
1,701,282	+				-0.8
1,701,283	-				-1.6
1,701,283	-				-2.8
1,701,283	-				-0.9
1,701,283	-				+0.5
1,701,283	-				+0.5
1,701,283	-				+0.7
1,701,283	-				+0.1
1,701,283	-				+0.1
1,701,283	-				-0.7
1,701,283	-				-0.3
1,701,283	-				-1.6
1,701,283	-				-1.8
1,701,283	-				+0.1
1,701,283	-				-0.4
1,701,340	-				-0.4
1,701,663	+		Psest_1597	0.58	-0.3
1,701,663	+		Psest_1597	0.58	-0.6
1,701,663	+		Psest_1597	0.58	-0.6
1,701,663	+		Psest_1597	0.58	+0.6
1,701,664	-		Psest_1597	0.58	-1.8
1,701,664	-		Psest_1597	0.58	-0.5
1,701,796	+				-0.3
1,701,797	-				-2.2
1,701,806	-				+0.8
1,701,842	+				-0.9
1,701,843	-				-0.3
1,701,843	-				-0.7
1,701,870	+				-0.4
1,701,958	+				-0.5
1,701,959	-				-0.7
1,701,959	-				-2.0
1,701,959	-				-1.4
1,702,048	+		Psest_1598	0.19	-0.6
1,702,207	+		Psest_1598	0.43	-0.5
1,702,207	+		Psest_1598	0.43	-0.9
1,702,208	-		Psest_1598	0.43	-0.7
1,702,255	-		Psest_1598	0.50	+0.0
1,702,359	+		Psest_1598	0.65	+0.1
1,702,360	-		Psest_1598	0.65	-1.2