Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1231

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,336,938	+		Psest_1229	0.69	-0.3
1,336,938	+		Psest_1229	0.69	-0.1
1,336,938	+		Psest_1229	0.69	+0.3
1,336,939	-		Psest_1229	0.69	-1.5
1,336,939	-		Psest_1229	0.69	-0.9
1,337,120	+		Psest_1229	0.78	-1.2
1,337,151	-		Psest_1229	0.80	-0.5
1,337,151	-		Psest_1229	0.80	-0.1
1,337,604	+		Psest_1230	0.29	-0.8
1,337,772	+		Psest_1230	0.85	-0.1
1,337,772	+		Psest_1230	0.85	+0.4
1,337,772	+		Psest_1230	0.85	-0.1
1,337,785	-		Psest_1230	0.90	-0.1
1,337,905	+				+2.2
1,337,905	+				-1.3
1,337,905	+				-0.4
1,337,905	+				+1.5
1,337,906	-				-0.1
1,337,906	-				-0.6
1,337,906	-				-0.5
1,337,906	-				-1.0
1,337,926	+				+0.5
1,337,962	+				+0.8
1,337,963	-				-0.5
1,338,052	-		Psest_1231	0.12	-1.7
1,338,154	+		Psest_1231	0.20	+1.2
1,338,154	+		Psest_1231	0.20	+0.4
1,338,155	-		Psest_1231	0.20	-0.8
1,338,221	-		Psest_1231	0.25	-1.6
1,338,221	-		Psest_1231	0.25	-0.0
1,338,221	-		Psest_1231	0.25	-1.1
1,338,221	-		Psest_1231	0.25	+2.2
1,338,233	-		Psest_1231	0.26	-1.0
1,338,366	+		Psest_1231	0.35	-1.2
1,338,463	+		Psest_1231	0.42	-0.5
1,338,463	+		Psest_1231	0.42	-1.6
1,338,464	-		Psest_1231	0.42	+0.5
1,338,464	-		Psest_1231	0.42	-0.8
1,338,464	-		Psest_1231	0.42	-0.9
1,338,649	-		Psest_1231	0.56	-0.8
1,338,649	-		Psest_1231	0.56	-2.3
1,338,957	+		Psest_1231	0.78	-0.3
1,338,957	+		Psest_1231	0.78	-1.1
1,338,957	+		Psest_1231	0.78	-0.6
1,338,958	-		Psest_1231	0.78	-1.1
1,338,995	+		Psest_1231	0.81	-1.8
1,338,995	+		Psest_1231	0.81	-0.7
1,339,191	+				-0.3
1,339,191	+				+0.6
1,339,191	+				-0.0
1,339,216	-				-0.8
1,339,221	+				-0.0
1,339,221	+				+1.9
1,339,221	+				-0.7
1,339,221	+				-0.4
1,339,221	+				+0.3
1,339,221	+				-0.4
1,339,221	+				+0.7
1,339,221	+				+0.4
1,339,221	+				-0.8
1,339,221	+				-0.7
1,339,221	+				+0.3
1,339,221	+				-0.9
1,339,221	+				-1.3
1,339,221	+				-0.7
1,339,221	+				-0.9
1,339,221	+				-0.1
1,339,221	+				-1.2
1,339,221	+				+1.0
1,339,221	+				+1.2
1,339,221	+				-0.3
1,339,221	+				-0.4
1,339,221	+				+0.9
1,339,221	+				-0.8
1,339,221	+				-0.4
1,339,221	+				-1.4
1,339,221	+				+0.3
1,339,221	+				+0.2
1,339,221	+				-1.5
1,339,221	+				-0.8
1,339,221	+				-0.5
1,339,221	+				+0.3
1,339,221	+				+0.2
1,339,222	-				-1.1
1,339,222	-				-1.0
1,339,222	-				-2.1
1,339,222	-				+0.4
1,339,222	-				-0.8
1,339,222	-				+0.4
1,339,222	-				+0.6
1,339,222	-				-1.5
1,339,222	-				-0.0
1,339,222	-				-2.6
1,339,222	-				+1.0
1,339,222	-				+0.0
1,339,222	-				+0.2
1,339,222	-				-0.8
1,339,222	-				-1.3
1,339,222	-				-2.8
1,339,222	-				+0.9
1,339,222	-				-0.1
1,339,222	-				-0.5
1,339,222	-				-2.1
1,339,222	-				+0.3
1,339,222	-				-1.6
1,339,222	-				+0.1
1,339,222	-				-0.2
1,339,222	-				-0.9
1,339,225	+				-0.1
1,339,225	+				-0.2
1,339,225	+				-0.3
1,339,225	+				+0.4
1,339,230	+				-0.8
1,339,230	+				+0.3
1,339,230	+				-0.6
1,339,230	+				-1.1
1,339,231	-				+0.9
1,339,258	+				-0.5
1,339,258	+				-1.3
1,339,258	+				-0.8
1,339,258	+				-0.4
1,339,258	+				-0.8
1,339,258	+				+0.3
1,339,259	-				+0.4
1,339,259	-				-0.6
1,339,259	-				-0.4
1,339,259	-				+0.1
1,339,341	+				+0.5
1,339,409	+				-0.3
1,339,409	+				+1.6
1,339,409	+				-0.5
1,339,410	-				+0.1
1,339,410	-				-0.1
1,339,410	-				-1.0
1,339,476	-				-1.5
1,339,493	+				-0.6
1,339,493	+				-0.4
1,339,493	+				+1.7
1,339,494	-				+0.1
1,339,517	+				-0.7
1,339,517	+				-1.5
1,339,517	+				+1.2
1,339,517	+				-1.1
1,339,518	-				+0.5
1,339,518	-				-1.5
1,339,522	+				+0.7
1,339,522	+				-0.1
1,339,522	+				+0.4
1,339,522	+				+1.4
1,339,522	+				+0.2
1,339,523	-				-0.2
1,339,523	-				-0.4
1,339,541	-				-0.4
1,339,570	-				+1.2
1,339,570	-				+0.3
1,339,570	-				-2.1