Experiment: A22 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4307 and Psest_4308 are separated by 58 nucleotides Psest_4308 and Psest_4309 overlap by 4 nucleotides Psest_4309 and Psest_4310 are separated by 12 nucleotides
Psest_4307: Psest_4307 - ABC-type Zn2+ transport system, periplasmic component/surface adhesin, at 4,506,500 to 4,507,531
_4307
Psest_4308: Psest_4308 - Fe2+/Zn2+ uptake regulation proteins, at 4,507,590 to 4,508,075
_4308
Psest_4309: Psest_4309 - ABC-type Mn/Zn transport systems, ATPase component, at 4,508,072 to 4,508,842
_4309
Psest_4310: Psest_4310 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 4,508,855 to 4,509,640
_4310
Position (kb)
4507
4508
4509 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4506.805 kb on - strand, within Psest_4307 at 4506.805 kb on - strand, within Psest_4307 at 4507.237 kb on + strand, within Psest_4307 at 4507.238 kb on - strand, within Psest_4307 at 4507.238 kb on - strand, within Psest_4307 at 4507.297 kb on - strand, within Psest_4307 at 4507.325 kb on + strand, within Psest_4307 at 4507.326 kb on - strand, within Psest_4307 at 4507.348 kb on - strand, within Psest_4307 at 4507.512 kb on + strand at 4507.513 kb on - strand at 4507.554 kb on - strand at 4507.557 kb on + strand at 4507.557 kb on + strand at 4507.557 kb on + strand at 4507.557 kb on + strand at 4507.557 kb on + strand at 4507.557 kb on + strand at 4507.558 kb on - strand at 4507.558 kb on - strand at 4507.558 kb on - strand at 4508.082 kb on + strand at 4508.082 kb on + strand at 4508.082 kb on + strand at 4508.552 kb on + strand, within Psest_4309 at 4508.753 kb on + strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.840 kb on + strand at 4508.840 kb on + strand at 4508.841 kb on - strand at 4508.841 kb on - strand at 4508.951 kb on + strand, within Psest_4310 at 4508.952 kb on - strand, within Psest_4310
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.002 mg/ml remove 4,506,805 - Psest_4307 0.30 -3.7 4,506,805 - Psest_4307 0.30 -0.7 4,507,237 + Psest_4307 0.71 -1.7 4,507,238 - Psest_4307 0.72 +0.5 4,507,238 - Psest_4307 0.72 -0.5 4,507,297 - Psest_4307 0.77 +0.5 4,507,325 + Psest_4307 0.80 -0.5 4,507,326 - Psest_4307 0.80 -0.5 4,507,348 - Psest_4307 0.82 -0.9 4,507,512 + +1.1 4,507,513 - +0.3 4,507,554 - +0.7 4,507,557 + -0.9 4,507,557 + +0.5 4,507,557 + -0.4 4,507,557 + -0.2 4,507,557 + +0.4 4,507,557 + +0.8 4,507,558 - -0.5 4,507,558 - -1.1 4,507,558 - -3.0 4,508,082 + +0.7 4,508,082 + +0.5 4,508,082 + +0.7 4,508,552 + Psest_4309 0.62 +0.4 4,508,753 + Psest_4309 0.88 -0.4 4,508,754 - Psest_4309 0.88 -0.7 4,508,754 - Psest_4309 0.88 +0.7 4,508,754 - Psest_4309 0.88 +1.1 4,508,754 - Psest_4309 0.88 -1.9 4,508,754 - Psest_4309 0.88 +1.1 4,508,754 - Psest_4309 0.88 +0.1 4,508,754 - Psest_4309 0.88 -1.2 4,508,754 - Psest_4309 0.88 +0.3 4,508,840 + -0.9 4,508,840 + -0.3 4,508,841 - -0.5 4,508,841 - +1.3 4,508,951 + Psest_4310 0.12 -2.3 4,508,952 - Psest_4310 0.12 -1.5
Or see this region's nucleotide sequence