Strain Fitness in Shewanella amazonensis SB2B around Sama_1397

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
1,690,566	+		Sama_1396	0.67	-0.0
1,690,566	+		Sama_1396	0.67	+0.4
1,690,566	+		Sama_1396	0.67	-0.1
1,690,566	+		Sama_1396	0.67	-0.1
1,690,567	-		Sama_1396	0.67	-0.2
1,690,567	-		Sama_1396	0.67	+0.3
1,690,567	-		Sama_1396	0.67	+0.7
1,690,568	+		Sama_1396	0.67	+0.3
1,690,568	+		Sama_1396	0.67	-1.0
1,690,568	+		Sama_1396	0.67	-0.7
1,690,569	-		Sama_1396	0.67	-0.7
1,690,569	-		Sama_1396	0.67	-0.6
1,690,623	+		Sama_1396	0.69	-0.2
1,690,624	-		Sama_1396	0.69	-0.4
1,690,624	-		Sama_1396	0.69	-0.2
1,690,637	-		Sama_1396	0.70	+0.4
1,690,652	+		Sama_1396	0.70	+0.3
1,690,652	+		Sama_1396	0.70	+0.1
1,690,652	+		Sama_1396	0.70	-0.0
1,690,652	+		Sama_1396	0.70	-0.5
1,690,652	+		Sama_1396	0.70	-0.0
1,690,652	+		Sama_1396	0.70	-0.6
1,690,673	+		Sama_1396	0.71	-0.0
1,690,831	+		Sama_1396	0.77	-0.2
1,690,855	+		Sama_1396	0.78	-0.0
1,690,855	+		Sama_1396	0.78	-1.2
1,690,855	+		Sama_1396	0.78	-1.5
1,690,856	-		Sama_1396	0.78	-0.6
1,690,856	-		Sama_1396	0.78	+1.3
1,691,058	+		Sama_1396	0.86	-0.6
1,691,058	+		Sama_1396	0.86	+0.3
1,691,059	-		Sama_1396	0.86	+0.5
1,691,112	+		Sama_1396	0.88	+0.4
1,691,113	-		Sama_1396	0.88	-0.1
1,691,113	-		Sama_1396	0.88	-0.1
1,691,115	+		Sama_1396	0.88	-0.4
1,691,115	+		Sama_1396	0.88	+0.2
1,691,115	+		Sama_1396	0.88	+0.1
1,691,115	+		Sama_1396	0.88	-0.2
1,691,115	+		Sama_1396	0.88	-0.1
1,691,116	-		Sama_1396	0.88	+0.3
1,691,134	+		Sama_1396	0.89	+1.1
1,691,247	-				-0.8
1,691,284	+				-0.6
1,691,285	-				-0.1
1,691,285	-				-1.0
1,691,301	+				+0.2
1,691,301	+				+0.5
1,691,302	-				+0.2
1,691,303	+				+0.1
1,691,303	+				+0.7
1,691,303	+				+0.1
1,691,303	+				-0.6
1,691,304	-				-0.4
1,691,304	-				-0.8
1,691,304	-				+0.5
1,691,304	-				-2.0
1,691,304	-				-0.5
1,691,304	-				+1.1
1,691,315	+				+0.5
1,691,368	+				+0.6
1,691,368	+				-0.1
1,691,425	+				+0.0
1,691,439	+				+0.6
1,691,445	+				-0.5
1,691,445	+				-0.3
1,691,445	+				-0.1
1,691,445	+				+0.6
1,691,516	+				-2.2
1,691,517	-				+1.0
1,691,517	-				-2.0
1,691,528	-				-2.2
1,691,528	-				+1.6
1,691,528	-				-0.2
1,691,528	-				-0.6
1,691,532	+				-0.0
1,691,532	+				-2.0
1,691,533	-				+0.1
1,691,533	-				-0.4
1,691,536	+				-0.0
1,691,537	-				-1.3
1,691,537	-				-0.9
1,691,537	-				+0.1
1,691,545	+				+0.1
1,691,545	+				-0.4
1,691,545	+				-0.9
1,691,545	+				-0.8
1,691,546	-				-1.1
1,691,579	-				+0.7
1,691,583	+				+0.0
1,691,583	+				+0.5
1,691,584	-				-0.2
1,691,715	+				-0.9
1,691,715	+				-0.8
1,691,715	+				+0.1
1,691,715	+				+0.1
1,691,715	+				+0.3
1,691,715	+				-0.6
1,691,716	-				+0.3
1,691,716	-				-1.0
1,691,717	+				-0.0
1,691,899	+		Sama_1397	0.12	-0.1
1,691,905	+		Sama_1397	0.12	+0.1
1,691,905	+		Sama_1397	0.12	+0.7
1,691,906	-		Sama_1397	0.12	-0.4
1,691,942	+		Sama_1397	0.14	-0.3
1,691,943	-		Sama_1397	0.14	+0.1
1,691,944	+		Sama_1397	0.14	-1.2
1,691,954	+		Sama_1397	0.14	+0.8
1,691,955	-		Sama_1397	0.14	+0.1
1,691,994	+		Sama_1397	0.15	+0.8
1,692,004	+		Sama_1397	0.16	+0.2
1,692,053	-		Sama_1397	0.17	+0.1
1,692,057	+		Sama_1397	0.17	-0.5
1,692,057	+		Sama_1397	0.17	+0.1
1,692,058	-		Sama_1397	0.18	+0.8
1,692,058	-		Sama_1397	0.18	+0.6
1,692,058	-		Sama_1397	0.18	-0.4
1,692,058	-		Sama_1397	0.18	-1.2
1,692,058	-		Sama_1397	0.18	-0.6
1,692,058	-		Sama_1397	0.18	+0.3
1,692,061	+		Sama_1397	0.18	-0.6
1,692,062	-		Sama_1397	0.18	+0.8
1,692,097	+		Sama_1397	0.19	-1.2
1,692,097	+		Sama_1397	0.19	-0.5
1,692,097	+		Sama_1397	0.19	-0.0
1,692,097	+		Sama_1397	0.19	+0.8
1,692,097	+		Sama_1397	0.19	+0.2
1,692,098	-		Sama_1397	0.19	-1.9
1,692,116	-		Sama_1397	0.19	-0.7
1,692,116	-		Sama_1397	0.19	-1.8
1,692,119	+		Sama_1397	0.20	-0.2
1,692,119	+		Sama_1397	0.20	-0.0
1,692,120	-		Sama_1397	0.20	-0.2
1,692,120	-		Sama_1397	0.20	-0.3
1,692,120	-		Sama_1397	0.20	-0.5
1,692,120	-		Sama_1397	0.20	+1.1
1,692,173	+		Sama_1397	0.21	+0.5
1,692,173	+		Sama_1397	0.21	-0.4
1,692,173	+		Sama_1397	0.21	+0.3
1,692,173	+		Sama_1397	0.21	-0.6
1,692,173	+		Sama_1397	0.21	-0.4
1,692,174	-		Sama_1397	0.21	+0.9
1,692,174	-		Sama_1397	0.21	-1.3
1,692,178	+		Sama_1397	0.21	-0.9
1,692,179	-		Sama_1397	0.22	+0.8
1,692,207	+		Sama_1397	0.22	+1.1
1,692,208	-		Sama_1397	0.22	-0.1
1,692,208	-		Sama_1397	0.22	+0.3
1,692,213	+		Sama_1397	0.23	-0.8
1,692,213	+		Sama_1397	0.23	+0.1
1,692,213	+		Sama_1397	0.23	+0.3
1,692,214	-		Sama_1397	0.23	-0.1
1,692,214	-		Sama_1397	0.23	-0.0
1,692,325	-		Sama_1397	0.26	+0.1
1,692,325	-		Sama_1397	0.26	+0.4
1,692,325	-		Sama_1397	0.26	+0.5
1,692,515	+		Sama_1397	0.33	-0.4
1,692,515	+		Sama_1397	0.33	+0.5
1,692,602	+		Sama_1397	0.35	-0.5
1,692,632	+		Sama_1397	0.36	-0.6
1,692,633	-		Sama_1397	0.37	-0.2
1,692,664	+		Sama_1397	0.38	-0.1
1,692,680	-		Sama_1397	0.38	+0.1
1,692,680	-		Sama_1397	0.38	+0.1
1,692,680	-		Sama_1397	0.38	-0.3
1,692,682	+		Sama_1397	0.38	-0.3
1,692,682	+		Sama_1397	0.38	-0.3
1,692,682	+		Sama_1397	0.38	-0.1
1,692,682	+		Sama_1397	0.38	-0.2
1,692,683	-		Sama_1397	0.38	-2.5
1,692,683	-		Sama_1397	0.38	-0.7
1,692,758	+		Sama_1397	0.41	+0.0
1,692,759	-		Sama_1397	0.41	+1.4
1,692,838	+		Sama_1397	0.43	-0.9
1,692,839	-		Sama_1397	0.43	+0.8
1,692,839	-		Sama_1397	0.43	-0.4
1,692,857	+		Sama_1397	0.44	-0.2
1,692,857	+		Sama_1397	0.44	-0.0
1,692,857	+		Sama_1397	0.44	-1.2
1,692,857	+		Sama_1397	0.44	-2.0
1,692,858	-		Sama_1397	0.44	-2.1
1,692,858	-		Sama_1397	0.44	-0.7
1,692,858	-		Sama_1397	0.44	-0.5
1,692,858	-		Sama_1397	0.44	+0.8
1,692,858	-		Sama_1397	0.44	+0.5
1,692,858	-		Sama_1397	0.44	-0.6
1,692,863	+		Sama_1397	0.44	-0.0
1,692,868	+		Sama_1397	0.44	+0.9
1,692,993	+		Sama_1397	0.48	-0.2
1,692,993	+		Sama_1397	0.48	+0.5
1,692,993	+		Sama_1397	0.48	+0.4
1,692,994	-		Sama_1397	0.48	+0.3
1,692,994	-		Sama_1397	0.48	+0.3
1,692,994	-		Sama_1397	0.48	+2.4
1,693,061	+		Sama_1397	0.51	+1.1
1,693,061	+		Sama_1397	0.51	+0.5
1,693,061	+		Sama_1397	0.51	-1.5
1,693,062	-		Sama_1397	0.51	+0.4
1,693,063	+		Sama_1397	0.51	-0.5
1,693,063	+		Sama_1397	0.51	-0.8
1,693,064	-		Sama_1397	0.51	+0.5
1,693,064	-		Sama_1397	0.51	-0.4
1,693,064	-		Sama_1397	0.51	+0.1
1,693,064	-		Sama_1397	0.51	-0.7
1,693,123	+		Sama_1397	0.53	-1.1
1,693,133	+		Sama_1397	0.53	-0.5
1,693,230	-		Sama_1397	0.56	-1.1
1,693,230	-		Sama_1397	0.56	+0.1
1,693,232	+		Sama_1397	0.56	+0.2
1,693,233	-		Sama_1397	0.56	-0.7
1,693,233	-		Sama_1397	0.56	+0.5
1,693,233	-		Sama_1397	0.56	+0.4
1,693,233	-		Sama_1397	0.56	-0.2
1,693,235	+		Sama_1397	0.56	-0.3
1,693,235	+		Sama_1397	0.56	-0.3
1,693,235	+		Sama_1397	0.56	-0.2
1,693,236	-		Sama_1397	0.56	-0.7
1,693,236	-		Sama_1397	0.56	-1.7
1,693,236	-		Sama_1397	0.56	+0.1
1,693,236	-		Sama_1397	0.56	-0.6
1,693,236	-		Sama_1397	0.56	+0.1
1,693,236	-		Sama_1397	0.56	+0.4
1,693,279	+		Sama_1397	0.58	-0.1
1,693,307	+		Sama_1397	0.59	-0.9
1,693,307	+		Sama_1397	0.59	+0.5
1,693,307	+		Sama_1397	0.59	-0.2
1,693,307	+		Sama_1397	0.59	+0.3
1,693,307	+		Sama_1397	0.59	-0.0
1,693,307	+		Sama_1397	0.59	-1.0
1,693,307	+		Sama_1397	0.59	+0.5
1,693,307	+		Sama_1397	0.59	+0.2
1,693,307	+		Sama_1397	0.59	-0.0
1,693,307	+		Sama_1397	0.59	-0.1
1,693,307	+		Sama_1397	0.59	+0.6
1,693,308	-		Sama_1397	0.59	-1.0
1,693,308	-		Sama_1397	0.59	-1.0
1,693,308	-		Sama_1397	0.59	-0.9
1,693,308	-		Sama_1397	0.59	+0.3
1,693,308	-		Sama_1397	0.59	+0.7
1,693,308	-		Sama_1397	0.59	-0.1
1,693,308	-		Sama_1397	0.59	-0.2
1,693,308	-		Sama_1397	0.59	+1.4
1,693,310	+		Sama_1397	0.59	+0.4
1,693,310	+		Sama_1397	0.59	-0.9
1,693,311	-		Sama_1397	0.59	-0.3
1,693,325	+		Sama_1397	0.59	-0.1
1,693,379	+		Sama_1397	0.61	-0.5
1,693,445	+		Sama_1397	0.63	-0.7
1,693,446	-		Sama_1397	0.63	+0.3
1,693,532	+		Sama_1397	0.66	-0.3
1,693,532	+		Sama_1397	0.66	-2.7
1,693,532	+		Sama_1397	0.66	-1.9
1,693,532	+		Sama_1397	0.66	+1.1
1,693,532	+		Sama_1397	0.66	-2.3
1,693,532	+		Sama_1397	0.66	+0.4
1,693,532	+		Sama_1397	0.66	-1.3
1,693,533	-		Sama_1397	0.66	-0.2
1,693,533	-		Sama_1397	0.66	+1.1
1,693,533	-		Sama_1397	0.66	+0.7
1,693,533	-		Sama_1397	0.66	-0.2
1,693,552	+		Sama_1397	0.67	-0.5
1,693,552	+		Sama_1397	0.67	-0.7
1,693,553	-		Sama_1397	0.67	-0.1
1,693,556	+		Sama_1397	0.67	-0.8
1,693,556	+		Sama_1397	0.67	+2.1
1,693,556	+		Sama_1397	0.67	+1.4
1,693,556	+		Sama_1397	0.67	+0.4
1,693,557	-		Sama_1397	0.67	-0.9
1,693,557	-		Sama_1397	0.67	-0.7
1,693,557	-		Sama_1397	0.67	-0.3
1,693,577	+		Sama_1397	0.68	-0.3
1,693,577	+		Sama_1397	0.68	+0.5
1,693,577	+		Sama_1397	0.68	+0.4
1,693,604	-		Sama_1397	0.69	+0.2
1,693,652	-		Sama_1397	0.70	-0.1
1,693,796	+		Sama_1397	0.75	-1.1
1,693,797	-		Sama_1397	0.75	+0.1
1,693,799	+		Sama_1397	0.75	+0.7
1,693,799	+		Sama_1397	0.75	+1.7
1,693,799	+		Sama_1397	0.75	-0.3
1,693,799	+		Sama_1397	0.75	-0.0
1,693,800	-		Sama_1397	0.75	-0.4
1,693,800	-		Sama_1397	0.75	+0.5
1,693,800	-		Sama_1397	0.75	+0.9
1,693,803	-		Sama_1397	0.75	-0.5
1,693,803	-		Sama_1397	0.75	+0.3
1,693,817	+		Sama_1397	0.76	-1.1
1,693,856	+		Sama_1397	0.77	+0.3
1,693,856	+		Sama_1397	0.77	-0.8
1,693,856	+		Sama_1397	0.77	-1.5
1,693,856	+		Sama_1397	0.77	+0.3
1,693,856	+		Sama_1397	0.77	-2.5
1,693,856	+		Sama_1397	0.77	-0.2
1,693,856	+		Sama_1397	0.77	-1.5
1,693,856	+		Sama_1397	0.77	-0.8
1,693,856	+		Sama_1397	0.77	+0.8
1,693,856	+		Sama_1397	0.77	+0.4
1,693,856	+		Sama_1397	0.77	+1.0
1,693,856	+		Sama_1397	0.77	+0.3
1,693,856	+		Sama_1397	0.77	-3.0
1,693,856	+		Sama_1397	0.77	+0.6
1,693,856	+		Sama_1397	0.77	+0.4
1,693,856	+		Sama_1397	0.77	+0.1
1,693,856	+		Sama_1397	0.77	+0.1
1,693,856	+		Sama_1397	0.77	-0.7
1,693,856	+		Sama_1397	0.77	+0.8
1,693,856	+		Sama_1397	0.77	+1.0
1,693,856	+		Sama_1397	0.77	-0.7
1,693,856	+		Sama_1397	0.77	-0.9
1,693,857	-		Sama_1397	0.77	-0.4
1,693,857	-		Sama_1397	0.77	+0.2
1,693,857	-		Sama_1397	0.77	-0.6
1,693,857	-		Sama_1397	0.77	-0.1
1,693,857	-		Sama_1397	0.77	-1.1
1,693,857	-		Sama_1397	0.77	-0.1
1,693,857	-		Sama_1397	0.77	+1.7
1,693,857	-		Sama_1397	0.77	-0.2
1,693,857	-		Sama_1397	0.77	-1.1
1,693,857	-		Sama_1397	0.77	-1.1
1,693,857	-		Sama_1397	0.77	-0.5
1,693,857	-		Sama_1397	0.77	-1.2
1,693,857	-		Sama_1397	0.77	+1.1
1,693,857	-		Sama_1397	0.77	+0.7
1,693,857	-		Sama_1397	0.77	+2.1
1,693,857	-		Sama_1397	0.77	-0.4
1,693,857	-		Sama_1397	0.77	+0.4
1,693,857	-		Sama_1397	0.77	-0.1
1,693,857	-		Sama_1397	0.77	-1.1
1,693,857	-		Sama_1397	0.77	+0.1
1,693,857	-		Sama_1397	0.77	-1.5
1,693,857	-		Sama_1397	0.77	+0.1
1,693,857	-		Sama_1397	0.77	-0.2
1,693,857	-		Sama_1397	0.77	-0.6
1,693,907	+		Sama_1397	0.79	+0.4
1,693,907	+		Sama_1397	0.79	+0.3
1,693,907	+		Sama_1397	0.79	+0.1
1,693,907	+		Sama_1397	0.79	+1.6
1,693,909	+		Sama_1397	0.79	+0.1
1,693,909	+		Sama_1397	0.79	+0.4
1,693,957	+		Sama_1397	0.80	+0.0
1,693,957	+		Sama_1397	0.80	-0.5
1,693,957	+		Sama_1397	0.80	-1.0
1,693,957	+		Sama_1397	0.80	+0.9
1,693,958	-		Sama_1397	0.80	-2.8
1,693,958	-		Sama_1397	0.80	-0.9
1,693,958	-		Sama_1397	0.80	-0.4
1,694,058	+		Sama_1397	0.84	-0.1
1,694,058	+		Sama_1397	0.84	-0.1
1,694,059	-		Sama_1397	0.84	+0.9
1,694,059	-		Sama_1397	0.84	-1.1
1,694,080	+		Sama_1397	0.84	+1.1
1,694,080	+		Sama_1397	0.84	-0.0
1,694,081	-		Sama_1397	0.84	-0.3
1,694,109	+		Sama_1397	0.85	-0.9
1,694,110	-		Sama_1397	0.85	+1.1
1,694,110	-		Sama_1397	0.85	-0.8
1,694,130	+		Sama_1397	0.86	+1.1
1,694,131	-		Sama_1397	0.86	+0.6
1,694,162	-		Sama_1397	0.87	+1.1
1,694,192	+		Sama_1397	0.88	+0.5
1,694,193	-		Sama_1397	0.88	-0.0
1,694,201	+		Sama_1397	0.88	+0.6
1,694,201	+		Sama_1397	0.88	-1.7
1,694,202	-		Sama_1397	0.88	+1.6
1,694,203	+		Sama_1397	0.88	-1.2
1,694,203	+		Sama_1397	0.88	-0.2
1,694,204	-		Sama_1397	0.88	+0.5
1,694,264	+				+0.0
1,694,264	+				-0.6
1,694,297	+				+0.4
1,694,297	+				-0.9
1,694,298	-				-0.1
1,694,315	+				-0.3
1,694,315	+				-1.9
1,694,315	+				-0.7
1,694,316	-				+0.5
1,694,401	+				-1.5
1,694,401	+				-0.0
1,694,401	+				+2.1
1,694,402	-				+1.5
1,694,402	-				+0.0
1,694,402	-				-0.2
1,694,402	-				-0.9
1,694,405	+				-0.3
1,694,405	+				+0.5
1,694,406	-				+1.4
1,694,406	-				-0.8
1,694,446	-				+0.8
1,694,552	+				+0.0
1,694,553	-				-0.0
1,694,558	+				-0.1
1,694,558	+				-0.3
1,694,565	+				+0.2
1,694,576	+				-0.5
1,694,576	+				+0.1
1,694,669	+				-0.8
1,694,670	-				-0.6
1,694,670	-				+0.4
1,694,680	-				+0.0
1,694,680	-				-0.0
1,694,708	+				+0.6
1,694,709	-				-1.2
1,694,853	-		Sama_1398	0.27	-0.5
1,694,853	-		Sama_1398	0.27	-0.4
1,694,884	+		Sama_1398	0.31	-1.0
1,694,884	+		Sama_1398	0.31	+0.1
1,695,131	+		Sama_1398	0.62	+0.6
1,695,132	-		Sama_1398	0.62	-0.2
1,695,132	-		Sama_1398	0.62	-0.3
1,695,197	+		Sama_1398	0.70	-0.3
1,695,197	+		Sama_1398	0.70	-1.5
1,695,217	+		Sama_1398	0.73	+0.8
1,695,218	-		Sama_1398	0.73	-0.7
1,695,218	-		Sama_1398	0.73	-0.0
1,695,260	+		Sama_1398	0.78	+1.7
1,695,260	+		Sama_1398	0.78	+0.3
1,695,260	+		Sama_1398	0.78	+0.6
1,695,260	+		Sama_1398	0.78	+0.2
1,695,260	+		Sama_1398	0.78	-1.1
1,695,260	+		Sama_1398	0.78	-0.6
1,695,261	-		Sama_1398	0.78	+0.9
1,695,261	-		Sama_1398	0.78	-0.0
1,695,261	-		Sama_1398	0.78	-0.7
1,695,261	-		Sama_1398	0.78	-1.3
1,695,261	-		Sama_1398	0.78	-0.6
1,695,261	-		Sama_1398	0.78	-0.8
1,695,306	+		Sama_1398	0.84	-1.2
1,695,307	-		Sama_1398	0.84	-0.2
1,695,307	-		Sama_1398	0.84	-1.0
1,695,314	+		Sama_1398	0.85	+1.1
1,695,314	+		Sama_1398	0.85	-0.5
1,695,314	+		Sama_1398	0.85	+0.8
1,695,314	+		Sama_1398	0.85	+0.7
1,695,315	-		Sama_1398	0.85	-0.3
1,695,315	-		Sama_1398	0.85	+0.6
1,695,315	-		Sama_1398	0.85	-2.0
1,695,315	-		Sama_1398	0.85	+0.6
1,695,315	-		Sama_1398	0.85	-0.3
1,695,318	+		Sama_1398	0.85	-0.3
1,695,318	+		Sama_1398	0.85	-0.4
1,695,318	+		Sama_1398	0.85	-0.1
1,695,318	+		Sama_1398	0.85	+0.1
1,695,319	-		Sama_1398	0.85	-0.9
1,695,319	-		Sama_1398	0.85	+0.3
1,695,319	-		Sama_1398	0.85	+1.4
1,695,319	-		Sama_1398	0.85	+1.3
1,695,443	-				-0.5