Strain Fitness in Shewanella amazonensis SB2B around Sama_0922

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
1,112,823	-				-0.8
1,112,826	-				+0.1
1,112,829	+				+0.4
1,112,829	+				+0.7
1,112,889	+				-0.2
1,112,889	+				-0.8
1,112,900	+				-0.1
1,112,900	+				-1.5
1,112,901	-				+0.4
1,112,902	+				+0.4
1,112,902	+				-1.9
1,112,902	+				-1.3
1,112,902	-				-1.3
1,112,903	-				-0.8
1,112,903	-				-0.5
1,112,903	-				-0.6
1,112,903	-				+0.3
1,112,905	+				+0.6
1,112,921	-				-0.9
1,112,923	+				-0.6
1,112,924	-				-0.5
1,112,946	+				-1.8
1,112,954	+				-0.2
1,112,954	+				+0.1
1,112,954	+				+0.0
1,112,981	+		Sama_0920	0.13	-0.5
1,112,991	-		Sama_0920	0.17	-1.0
1,113,087	-		Sama_0920	0.49	-0.6
1,113,087	-		Sama_0920	0.49	-2.6
1,113,132	+		Sama_0920	0.64	-0.2
1,113,132	+		Sama_0920	0.64	-0.5
1,113,133	-		Sama_0920	0.65	+0.5
1,113,168	-		Sama_0920	0.76	-1.1
1,113,194	+		Sama_0920	0.85	-0.4
1,113,219	+				-0.5
1,113,226	+				+0.2
1,113,226	+				+0.2
1,113,226	+				-0.8
1,113,226	+				-1.1
1,113,226	+				+0.6
1,113,227	-				-1.5
1,113,227	-				-0.4
1,113,227	-				-0.6
1,113,227	-				+0.4
1,115,341	+				-0.0
1,115,341	+				+0.3
1,115,342	-				-0.2
1,115,397	+				+0.5
1,115,397	+				-1.1
1,115,397	+				+0.5
1,115,397	+				-0.5
1,115,397	+				-2.5
1,115,397	+				-0.2
1,115,397	+				-0.4
1,115,397	+				-0.2
1,115,399	+				-1.2
1,115,399	+				-1.7
1,115,399	+				-1.6
1,115,399	+				-1.5
1,115,399	+				-0.3
1,115,399	+				+0.2
1,115,399	+				-0.6
1,115,399	+				-0.2
1,115,399	+				-2.6
1,115,399	+				-0.9
1,115,412	+				-2.5
1,115,412	+				-0.5
1,115,416	+				+0.3