Strain Fitness in Shewanella amazonensis SB2B around Sama_0825

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
1,010,618	-				-1.8
1,010,618	-				-0.1
1,010,713	-		Sama_0825	0.18	-0.4
1,010,718	-		Sama_0825	0.20	+0.4
1,010,746	-		Sama_0825	0.26	-1.4
1,011,429	+				+0.0
1,011,464	+				-0.8
1,011,472	+				-0.4
1,011,472	+				+0.1
1,011,472	+				+0.8
1,011,472	+				+0.6
1,011,472	+				+0.3
1,011,472	+				+1.0
1,011,472	+				+0.0
1,011,472	+				-1.2
1,011,475	+				+0.1
1,011,475	+				+0.9
1,011,475	+				-0.3
1,011,478	+				+0.1
1,011,478	+				+0.6
1,011,483	+				-0.4
1,011,483	+				-1.4
1,011,484	-				-1.1