Experiment: Cephalothin 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0749 and Psest_0750 are separated by 108 nucleotides Psest_0750 and Psest_0751 are separated by 22 nucleotides
Psest_0749: Psest_0749 - Transcriptional regulator, at 820,936 to 821,646
_0749
Psest_0750: Psest_0750 - hypothetical protein, at 821,755 to 822,129
_0750
Psest_0751: Psest_0751 - Arabinose efflux permease, at 822,152 to 823,333
_0751
Position (kb) 821
822
823 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 820.780 kb on + strand at 820.900 kb on - strand at 820.905 kb on - strand at 821.049 kb on + strand, within Psest_0749 at 821.050 kb on - strand, within Psest_0749 at 821.176 kb on + strand, within Psest_0749 at 821.177 kb on - strand, within Psest_0749 at 821.177 kb on - strand, within Psest_0749 at 821.177 kb on - strand, within Psest_0749 at 821.180 kb on - strand, within Psest_0749 at 821.180 kb on - strand, within Psest_0749 at 821.180 kb on - strand, within Psest_0749 at 821.180 kb on - strand, within Psest_0749 at 821.180 kb on - strand, within Psest_0749 at 821.203 kb on + strand, within Psest_0749 at 821.203 kb on + strand, within Psest_0749 at 821.203 kb on + strand, within Psest_0749 at 821.203 kb on + strand, within Psest_0749 at 821.204 kb on - strand, within Psest_0749 at 821.296 kb on + strand, within Psest_0749 at 821.525 kb on - strand, within Psest_0749 at 821.700 kb on - strand at 821.755 kb on - strand at 821.784 kb on + strand at 821.784 kb on + strand at 821.784 kb on + strand at 821.784 kb on + strand at 821.785 kb on - strand at 821.812 kb on + strand, within Psest_0750 at 821.812 kb on + strand, within Psest_0750 at 821.812 kb on + strand, within Psest_0750 at 821.812 kb on + strand, within Psest_0750 at 821.812 kb on + strand, within Psest_0750 at 821.813 kb on - strand, within Psest_0750 at 821.813 kb on - strand, within Psest_0750 at 821.813 kb on - strand, within Psest_0750 at 821.813 kb on - strand, within Psest_0750 at 821.813 kb on - strand, within Psest_0750 at 821.833 kb on + strand, within Psest_0750 at 821.833 kb on + strand, within Psest_0750 at 822.407 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.829 kb on - strand, within Psest_0751 at 822.829 kb on - strand, within Psest_0751 at 822.829 kb on - strand, within Psest_0751 at 822.829 kb on - strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.982 kb on - strand, within Psest_0751
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.04 mg/ml remove 820,780 + -0.6 820,900 - -2.1 820,905 - -1.3 821,049 + Psest_0749 0.16 -0.3 821,050 - Psest_0749 0.16 -0.8 821,176 + Psest_0749 0.34 -0.3 821,177 - Psest_0749 0.34 +1.6 821,177 - Psest_0749 0.34 +1.7 821,177 - Psest_0749 0.34 +0.7 821,180 - Psest_0749 0.34 +1.3 821,180 - Psest_0749 0.34 +1.0 821,180 - Psest_0749 0.34 +2.6 821,180 - Psest_0749 0.34 +0.6 821,180 - Psest_0749 0.34 +0.5 821,203 + Psest_0749 0.38 +0.7 821,203 + Psest_0749 0.38 -2.2 821,203 + Psest_0749 0.38 +1.3 821,203 + Psest_0749 0.38 +0.5 821,204 - Psest_0749 0.38 -0.5 821,296 + Psest_0749 0.51 +0.7 821,525 - Psest_0749 0.83 -0.7 821,700 - -0.0 821,755 - +2.0 821,784 + -1.1 821,784 + -1.3 821,784 + -0.2 821,784 + +0.9 821,785 - +1.2 821,812 + Psest_0750 0.15 -0.3 821,812 + Psest_0750 0.15 -0.6 821,812 + Psest_0750 0.15 -1.7 821,812 + Psest_0750 0.15 -1.0 821,812 + Psest_0750 0.15 -0.9 821,813 - Psest_0750 0.15 -2.5 821,813 - Psest_0750 0.15 +0.1 821,813 - Psest_0750 0.15 -2.0 821,813 - Psest_0750 0.15 +0.0 821,813 - Psest_0750 0.15 -0.1 821,833 + Psest_0750 0.21 -0.3 821,833 + Psest_0750 0.21 -1.9 822,407 + Psest_0751 0.22 -0.6 822,828 + Psest_0751 0.57 -0.3 822,828 + Psest_0751 0.57 -0.9 822,828 + Psest_0751 0.57 +1.4 822,828 + Psest_0751 0.57 +1.7 822,828 + Psest_0751 0.57 +1.7 822,828 + Psest_0751 0.57 -0.1 822,828 + Psest_0751 0.57 +0.7 822,828 + Psest_0751 0.57 +1.0 822,829 - Psest_0751 0.57 +1.4 822,829 - Psest_0751 0.57 +1.7 822,829 - Psest_0751 0.57 -0.6 822,829 - Psest_0751 0.57 +2.9 822,981 + Psest_0751 0.70 +0.7 822,981 + Psest_0751 0.70 +1.1 822,981 + Psest_0751 0.70 -0.3 822,981 + Psest_0751 0.70 +3.7 822,981 + Psest_0751 0.70 -0.3 822,981 + Psest_0751 0.70 -0.4 822,981 + Psest_0751 0.70 +0.1 822,982 - Psest_0751 0.70 +2.0
Or see this region's nucleotide sequence