Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4293

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
4,484,653	-		Psest_4291	0.52	-0.2
4,484,875	+		Psest_4291	0.72	+1.6
4,484,875	+		Psest_4291	0.72	+0.9
4,484,875	+		Psest_4291	0.72	+0.5
4,484,875	+		Psest_4291	0.72	-0.1
4,484,875	+		Psest_4291	0.72	+2.0
4,484,876	-		Psest_4291	0.72	-2.1
4,484,876	-		Psest_4291	0.72	-0.3
4,484,876	-		Psest_4291	0.72	+0.5
4,484,984	+		Psest_4291	0.82	+1.4
4,484,985	-		Psest_4291	0.82	-3.2
4,484,985	-		Psest_4291	0.82	-2.4
4,485,136	+				+2.1
4,485,175	-				-1.8
4,485,211	+				-0.4
4,485,360	+		Psest_4292	0.33	+0.1
4,485,360	+		Psest_4292	0.33	+0.4
4,485,360	+		Psest_4292	0.33	+2.4
4,485,360	+		Psest_4292	0.33	+1.3
4,485,360	+		Psest_4292	0.33	-0.2
4,485,360	+		Psest_4292	0.33	+0.4
4,485,360	+		Psest_4292	0.33	+0.3
4,485,360	+		Psest_4292	0.33	+0.3
4,485,360	+		Psest_4292	0.33	+0.4
4,485,360	+		Psest_4292	0.33	+0.7
4,485,361	-		Psest_4292	0.34	-2.9
4,485,361	-		Psest_4292	0.34	-1.5
4,485,361	-		Psest_4292	0.34	-0.6
4,485,361	-		Psest_4292	0.34	-1.1
4,485,361	-		Psest_4292	0.34	-2.0
4,485,361	-		Psest_4292	0.34	-1.7
4,485,420	+		Psest_4292	0.48	-1.0
4,485,420	+		Psest_4292	0.48	+0.9
4,485,420	+		Psest_4292	0.48	+0.7
4,485,421	-		Psest_4292	0.48	-1.1
4,485,421	-		Psest_4292	0.48	+0.3
4,485,421	-		Psest_4292	0.48	-2.0
4,485,692	-				+0.9
4,485,693	+				+0.8
4,485,693	+				+0.7
4,485,693	+				+1.3
4,485,693	+				+1.6
4,485,693	+				+0.8
4,485,693	+				+2.3
4,485,693	+				+0.4
4,485,693	+				+2.5
4,485,693	+				+2.5
4,485,693	+				+1.0
4,485,693	+				+0.9
4,485,693	+				+1.9
4,485,693	+				+1.5
4,485,693	+				+0.5
4,485,693	+				+1.7
4,485,693	+				-0.5
4,485,693	+				+0.1
4,485,693	+				+1.2
4,485,693	+				+1.6
4,485,693	+				+1.5
4,485,693	+				+0.6
4,485,694	-				+0.7
4,485,694	-				-0.2
4,485,694	-				+0.5
4,485,694	-				-0.1
4,485,694	-				+0.5
4,485,694	-				+0.4
4,485,694	-				+0.9
4,485,694	-				+0.1
4,485,694	-				+0.4
4,485,694	-				+0.1
4,485,694	-				+0.7
4,485,694	-				+1.5
4,485,694	-				+0.8
4,485,694	-				+0.1
4,485,694	-				+0.3
4,485,694	-				+1.0
4,485,719	+				+0.9
4,485,753	+		Psest_4293	0.10	+1.0
4,485,753	+		Psest_4293	0.10	+1.4
4,485,754	-		Psest_4293	0.10	+0.9
4,486,006	+		Psest_4293	0.36	+1.9
4,486,006	+		Psest_4293	0.36	+1.2
4,486,007	-		Psest_4293	0.36	+1.0
4,486,429	+		Psest_4293	0.78	+0.6
4,486,429	+		Psest_4293	0.78	+0.4
4,486,429	+		Psest_4293	0.78	+0.4
4,486,429	+		Psest_4293	0.78	-0.6
4,486,429	+		Psest_4293	0.78	+1.0
4,486,429	+		Psest_4293	0.78	+0.5
4,486,430	-		Psest_4293	0.78	+2.2
4,486,430	-		Psest_4293	0.78	+1.4
4,486,430	-		Psest_4293	0.78	+0.6
4,486,430	-		Psest_4293	0.78	+0.2
4,486,430	-		Psest_4293	0.78	+0.8
4,486,430	-		Psest_4293	0.78	+1.1
4,486,437	+		Psest_4293	0.79	+2.5
4,486,452	+		Psest_4293	0.80	+0.0
4,486,452	+		Psest_4293	0.80	-0.2
4,486,452	+		Psest_4293	0.80	+0.3
4,486,452	+		Psest_4293	0.80	+0.8
4,486,453	-		Psest_4293	0.80	+1.0
4,486,453	-		Psest_4293	0.80	+0.5
4,486,695	+				-0.9
4,486,695	+				-0.7
4,486,695	+				-1.3
4,486,695	+				+1.4
4,486,695	+				-0.3
4,486,695	+				-0.7
4,486,695	+				+0.8
4,486,695	+				+0.0
4,486,696	-				-0.7
4,486,696	-				-1.6
4,486,696	-				-0.4
4,486,696	-				-1.4
4,486,696	-				+1.5
4,486,696	-				+1.0
4,486,696	-				-0.6
4,486,700	+				+0.7
4,486,701	-				-0.2
4,486,701	-				-0.7
4,486,807	+				+0.4
4,486,807	+				+0.8
4,486,808	-				+0.5
4,486,847	+				+2.0
4,486,847	+				+0.1
4,486,954	+		Psest_4294	0.15	+1.1
4,486,954	+		Psest_4294	0.15	+0.9
4,486,954	+		Psest_4294	0.15	+0.8
4,486,954	+		Psest_4294	0.15	+0.2
4,486,955	-		Psest_4294	0.15	-0.8
4,486,955	-		Psest_4294	0.15	-0.3
4,486,955	-		Psest_4294	0.15	-1.0
4,487,578	+		Psest_4294	0.67	-0.7
4,487,578	+		Psest_4294	0.67	-0.3
4,487,620	+		Psest_4294	0.71	-1.9
4,487,620	+		Psest_4294	0.71	+0.3
4,487,620	+		Psest_4294	0.71	-2.1
4,487,620	+		Psest_4294	0.71	-1.8
4,487,620	+		Psest_4294	0.71	+0.5
4,487,621	-		Psest_4294	0.71	-1.1
4,487,621	-		Psest_4294	0.71	-0.4
4,487,621	-		Psest_4294	0.71	-2.5
4,487,624	+		Psest_4294	0.71	-0.3
4,487,624	+		Psest_4294	0.71	-0.2
4,487,624	+		Psest_4294	0.71	-0.3
4,487,624	+		Psest_4294	0.71	-0.3
4,487,624	+		Psest_4294	0.71	-0.1
4,487,625	-		Psest_4294	0.71	-1.2
4,487,625	-		Psest_4294	0.71	-2.2
4,487,625	-		Psest_4294	0.71	-1.3
4,487,625	-		Psest_4294	0.71	-1.2
4,487,625	-		Psest_4294	0.71	-1.7
4,487,625	-		Psest_4294	0.71	-1.3