Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0422

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
456,962	+				+0.2
456,963	-				-2.1
456,963	-				-0.4
456,963	-				+0.2
457,015	-				-0.2
457,047	-				-0.4
457,047	-				-0.8
457,081	+				+1.3
457,081	+				+2.8
457,081	+				+2.4
457,081	+				+1.1
457,081	+				+2.3
457,081	+				+1.0
457,081	+				+0.5
457,082	-				-2.5
457,082	-				-0.8
457,082	-				-0.9
457,093	+				+1.9
457,094	-				-0.8
457,094	-				-1.2
457,094	-				-0.4
457,094	-				-1.0
457,094	-				-1.9
457,122	+				+0.5
457,123	-				-1.2
457,134	+				+1.8
457,135	-				+0.2
457,150	+				+3.2
457,160	+				+2.6
457,161	-				+0.3
457,184	-				+0.8
457,184	-				+0.6
457,184	-				+1.1
457,188	+				+2.4
457,188	+				+2.3
457,188	+				+2.5
457,188	+				+2.2
457,188	+				+2.5
457,189	-				+1.8
457,189	-				+0.2
457,189	-				+0.0
457,189	-				+0.1
457,189	-				+1.5
457,189	-				+0.5
457,189	-				+0.4
457,196	-				+0.2
457,196	-				+0.3
457,196	-				+0.9
457,467	+				-1.3
457,468	-				-0.2
457,468	-				-0.8
457,468	-				-1.1
457,491	+				+0.3
457,491	+				-0.6
457,491	+				-0.4
457,491	+				-1.1
457,491	+				-1.4
457,492	-				+0.7
457,492	-				+0.1
457,492	-				+0.6
457,494	+				+0.2
457,495	-				-0.5
457,495	-				-1.2
457,495	-				-0.6
457,495	-				+0.1
457,495	-				+1.7
457,495	-				-3.4
457,515	-				+1.4
457,614	+				-1.3
457,614	+				-1.1
457,615	-				-0.6
457,615	-				-0.3
457,615	-				-0.7
457,615	-				-1.6
457,672	-				+0.2
457,691	-				-0.9
457,694	+				-1.8
457,694	+				-1.0
457,695	-				-0.1
457,695	-				-2.2
457,698	+				-1.0
457,699	-				-0.9
457,721	-				-1.0
457,721	-				-0.8
457,721	-				-1.1
457,721	-				-1.1
457,728	-				-0.3
457,728	-				-1.8
457,791	+				+1.0
457,791	+				+0.8
457,796	-				+0.1
457,903	+				-1.4
457,934	+				+0.2
457,935	-				+0.2
458,042	-				-1.3
458,116	+		Psest_0422	0.16	-2.2
458,116	+		Psest_0422	0.16	-0.3
458,164	-		Psest_0422	0.20	-1.1
458,192	+		Psest_0422	0.23	+0.2
458,196	+		Psest_0422	0.23	-0.6
458,253	+		Psest_0422	0.28	-2.0
458,254	-		Psest_0422	0.28	-0.7
458,310	+		Psest_0422	0.33	-0.6
458,490	+		Psest_0422	0.49	-1.6
458,503	+		Psest_0422	0.50	+1.1
458,798	-		Psest_0422	0.77	+0.3
458,798	-		Psest_0422	0.77	+0.2
458,872	+		Psest_0422	0.83	-0.9
458,872	+		Psest_0422	0.83	-1.5
458,876	+		Psest_0422	0.84	-1.8
458,891	+		Psest_0422	0.85	+0.1
459,005	+				-1.1
459,006	-				-1.7
459,007	+				-1.7
459,007	+				+0.7
459,008	-				-0.8
459,157	-				-1.7
459,232	-				-1.2
459,232	-				-0.9
459,245	+				-1.6
459,462	+		Psest_0423	0.20	-2.9
459,630	-		Psest_0423	0.28	-1.7
459,643	+		Psest_0423	0.29	-0.8
459,644	-		Psest_0423	0.29	-0.3
459,716	+		Psest_0423	0.32	-0.5
459,749	+		Psest_0423	0.34	+0.1
459,749	+		Psest_0423	0.34	-4.0
459,750	-		Psest_0423	0.34	+0.1
459,897	+		Psest_0423	0.41	-1.3
459,918	-		Psest_0423	0.42	-3.0
459,979	+		Psest_0423	0.45	-0.9
459,979	+		Psest_0423	0.45	-0.5
459,980	-		Psest_0423	0.45	-1.1