Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4110

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
4,292,619	+				+0.8
4,292,619	+				+0.1
4,292,619	+				+0.7
4,292,620	-				-0.3
4,292,620	-				-0.2
4,292,620	-				-2.1
4,292,620	-				+0.3
4,292,620	-				-1.5
4,292,620	-				-1.9
4,292,620	-				-1.2
4,292,620	-				-0.1
4,292,620	-				-0.5
4,292,844	-				-1.0
4,292,844	-				+1.7
4,292,892	+				-0.0
4,292,913	+				-0.7
4,292,913	+				-0.7
4,292,913	+				-1.9
4,292,913	+				-2.2
4,292,913	+				-1.8
4,292,913	+				-1.9
4,292,913	+				-2.7
4,292,913	+				-0.7
4,292,913	+				-0.7
4,292,913	+				-1.6
4,292,913	+				-1.4
4,292,913	+				-1.5
4,292,913	+				-1.3
4,292,914	-				-0.2
4,292,914	-				-2.9
4,292,914	-				-2.5
4,292,914	-				-0.2
4,292,914	-				-3.0
4,292,914	-				-2.1
4,292,914	-				-1.4
4,292,914	-				-1.2
4,292,914	-				-2.5
4,292,914	-				-0.7
4,292,914	-				+0.3
4,292,914	-				-0.7
4,292,964	+				-0.2
4,292,964	+				-0.5
4,292,965	-				-2.4
4,292,965	-				-0.2
4,292,965	-				-0.2
4,293,068	+				-1.8
4,293,069	-				-0.7
4,293,069	-				-1.8
4,293,069	-				-0.2
4,293,085	+				-2.1
4,293,100	+				+1.7
4,293,121	-				-0.7
4,293,172	+				-0.6
4,293,173	-				-2.5
4,293,173	-				-0.7
4,293,181	+				-0.2
4,293,211	+				-1.2
4,293,225	+				-0.5
4,293,447	+				-2.1
4,293,451	+				-2.5
4,293,451	+				-2.5
4,293,494	+				-1.7
4,293,544	-				-1.6
4,293,548	+				-2.0
4,293,581	+				-1.0
4,293,612	+				-1.0
4,293,628	-				-1.8
4,293,665	-		Psest_4110	0.11	-0.1
4,293,665	-		Psest_4110	0.11	-2.5
4,293,665	-		Psest_4110	0.11	-0.8
4,293,688	-		Psest_4110	0.13	-1.2
4,293,698	+		Psest_4110	0.13	+0.3
4,293,877	-		Psest_4110	0.25	-1.1
4,293,877	-		Psest_4110	0.25	-2.0
4,293,919	+		Psest_4110	0.27	-0.6
4,293,919	+		Psest_4110	0.27	-0.1
4,293,920	-		Psest_4110	0.27	+0.3
4,293,920	-		Psest_4110	0.27	-0.1
4,293,926	+		Psest_4110	0.28	-2.0
4,293,927	-		Psest_4110	0.28	+0.3
4,293,972	-		Psest_4110	0.31	-1.2
4,293,972	-		Psest_4110	0.31	-1.0
4,293,983	+		Psest_4110	0.31	-1.8
4,293,984	-		Psest_4110	0.31	-2.2
4,293,989	-		Psest_4110	0.32	+0.3
4,293,989	-		Psest_4110	0.32	-1.9
4,293,993	+		Psest_4110	0.32	-0.7
4,293,995	+		Psest_4110	0.32	-2.1
4,294,020	+		Psest_4110	0.34	-0.5
4,294,021	-		Psest_4110	0.34	-2.1
4,294,038	+		Psest_4110	0.35	-1.2
4,294,076	+		Psest_4110	0.37	-0.7
4,294,077	-		Psest_4110	0.37	-2.5
4,294,173	+		Psest_4110	0.43	-1.2
4,294,174	-		Psest_4110	0.43	+1.3
4,294,174	-		Psest_4110	0.43	-1.0
4,294,188	-		Psest_4110	0.44	-3.1
4,294,188	-		Psest_4110	0.44	-1.2
4,294,238	+		Psest_4110	0.47	-0.2
4,294,239	-		Psest_4110	0.47	-1.7
4,294,239	-		Psest_4110	0.47	-1.8
4,294,248	+		Psest_4110	0.48	-2.2
4,294,248	+		Psest_4110	0.48	-1.5
4,294,267	+		Psest_4110	0.49	-0.2
4,294,267	+		Psest_4110	0.49	-1.9
4,294,268	-		Psest_4110	0.49	-1.4
4,294,268	-		Psest_4110	0.49	-2.6
4,294,304	+		Psest_4110	0.51	-0.1
4,294,304	+		Psest_4110	0.51	-0.7
4,294,397	-		Psest_4110	0.57	-2.5
4,294,398	+		Psest_4110	0.57	-0.2
4,294,398	+		Psest_4110	0.57	-2.5
4,294,398	+		Psest_4110	0.57	-0.2
4,294,399	-		Psest_4110	0.57	-1.3
4,294,399	-		Psest_4110	0.57	-0.8
4,294,399	-		Psest_4110	0.57	-1.5
4,294,511	+		Psest_4110	0.64	-1.0
4,294,674	+		Psest_4110	0.75	+0.2
4,294,674	+		Psest_4110	0.75	-0.2
4,294,674	+		Psest_4110	0.75	-0.9
4,294,674	+		Psest_4110	0.75	-3.8
4,294,674	+		Psest_4110	0.75	-1.4
4,294,675	-		Psest_4110	0.75	-1.0
4,294,741	+		Psest_4110	0.79	-3.1
4,294,742	-		Psest_4110	0.79	+0.3
4,294,767	-		Psest_4110	0.80	-2.7
4,294,922	+				-1.5
4,294,922	+				-2.2
4,294,923	-				-0.7
4,295,001	+				-0.7
4,295,001	+				-0.9
4,295,001	+				-0.1
4,295,092	-				-1.1
4,295,096	-				-1.2
4,295,117	+				-0.4
4,295,166	+				+1.1
4,295,167	-				-2.2
4,295,167	-				-1.4
4,295,215	+		Psest_4111	0.18	-2.5
4,295,312	+		Psest_4111	0.36	-0.6
4,295,312	+		Psest_4111	0.36	-0.3
4,295,312	+		Psest_4111	0.36	-2.3
4,295,312	+		Psest_4111	0.36	-0.5
4,295,312	+		Psest_4111	0.36	+0.0
4,295,312	+		Psest_4111	0.36	+0.6
4,295,312	+		Psest_4111	0.36	-2.6
4,295,312	+		Psest_4111	0.36	+0.1
4,295,312	+		Psest_4111	0.36	-2.0
4,295,312	+		Psest_4111	0.36	+0.1
4,295,313	-		Psest_4111	0.36	-1.7
4,295,313	-		Psest_4111	0.36	-1.1
4,295,313	-		Psest_4111	0.36	-1.7
4,295,313	-		Psest_4111	0.36	-1.7
4,295,313	-		Psest_4111	0.36	-1.8
4,295,313	-		Psest_4111	0.36	-1.5
4,295,313	-		Psest_4111	0.36	-0.7
4,295,313	-		Psest_4111	0.36	+0.3
4,295,313	-		Psest_4111	0.36	-1.0
4,295,359	-		Psest_4111	0.44	-0.8
4,295,359	-		Psest_4111	0.44	-0.9
4,295,419	+		Psest_4111	0.55	-1.9
4,295,419	+		Psest_4111	0.55	-1.1
4,295,419	+		Psest_4111	0.55	-0.8
4,295,419	+		Psest_4111	0.55	+0.9
4,295,419	+		Psest_4111	0.55	-2.1
4,295,419	+		Psest_4111	0.55	-2.6
4,295,419	+		Psest_4111	0.55	-1.4
4,295,419	+		Psest_4111	0.55	-2.1
4,295,420	-		Psest_4111	0.55	-2.2
4,295,420	-		Psest_4111	0.55	-1.7
4,295,420	-		Psest_4111	0.55	-1.2
4,295,420	-		Psest_4111	0.55	-0.7
4,295,422	+		Psest_4111	0.55	-0.7
4,295,423	-		Psest_4111	0.56	-0.4
4,295,554	+		Psest_4111	0.79	+0.2
4,295,606	-		Psest_4111	0.89	-0.3
4,295,606	-		Psest_4111	0.89	-0.5
4,295,636	+				-1.5
4,295,637	-				-1.7
4,295,637	-				+0.1
4,295,637	-				-2.2
4,295,667	+				-0.3
4,295,667	+				-3.3
4,295,667	+				-0.9
4,295,667	+				-3.7
4,295,667	+				-1.3
4,295,668	-				-0.6
4,295,668	-				-4.2
4,295,668	-				+2.0
4,296,003	-				-1.8