Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4089

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
4,264,045	+		Psest_4088	0.19	+0.5
4,264,045	+		Psest_4088	0.19	+0.6
4,264,045	+		Psest_4088	0.19	-0.6
4,264,045	+		Psest_4088	0.19	+0.1
4,264,045	+		Psest_4088	0.19	-0.7
4,264,045	+		Psest_4088	0.19	+2.0
4,264,046	-		Psest_4088	0.19	+2.0
4,264,046	-		Psest_4088	0.19	-0.7
4,264,046	-		Psest_4088	0.19	-0.6
4,264,046	-		Psest_4088	0.19	-0.0
4,264,345	+		Psest_4088	0.54	-1.1
4,264,704	+				-0.3
4,264,760	-				+0.1
4,264,819	+				-1.4
4,264,819	+				-0.9
4,264,819	+				-0.5
4,264,820	-				-1.2
4,264,820	-				+1.5
4,264,834	+				-1.0
4,264,834	+				-1.2
4,264,834	+				-0.6
4,264,834	+				-1.6
4,264,834	+				-1.6
4,264,834	+				-1.4
4,264,835	-				-0.0
4,264,835	-				-1.6
4,264,835	-				+0.2
4,264,835	-				-0.2
4,264,835	-				+0.1
4,264,836	+				-0.8
4,264,836	+				-1.1
4,264,837	-				+0.8
4,264,837	-				+1.3
4,264,837	-				+1.8
4,264,837	-				+1.4
4,264,837	-				+0.4
4,264,837	-				+2.0
4,264,837	-				-0.4
4,264,839	+				-0.4
4,264,839	+				-1.4
4,264,839	+				-1.4
4,264,839	+				-0.4
4,264,839	+				-0.2
4,264,839	+				-0.5
4,264,839	+				-1.7
4,264,839	+				-1.0
4,264,839	+				-1.0
4,264,839	+				-1.2
4,264,839	+				-2.9
4,264,839	+				-0.6
4,264,840	-				-1.2
4,264,840	-				-0.6
4,264,874	+				-0.4
4,264,962	+				-0.2
4,264,963	-				-0.3
4,264,963	-				+0.8
4,265,137	-		Psest_4089	0.17	-0.0
4,265,137	-		Psest_4089	0.17	+0.0
4,265,169	+		Psest_4089	0.20	-0.9
4,265,169	+		Psest_4089	0.20	-0.6
4,265,170	-		Psest_4089	0.20	-1.2
4,265,170	-		Psest_4089	0.20	+0.6
4,265,170	-		Psest_4089	0.20	+1.3
4,265,170	-		Psest_4089	0.20	-0.2
4,265,220	+		Psest_4089	0.23	-0.8
4,265,220	+		Psest_4089	0.23	+0.7
4,265,220	+		Psest_4089	0.23	-0.0
4,265,220	+		Psest_4089	0.23	-0.4
4,265,220	+		Psest_4089	0.23	-0.5
4,265,221	-		Psest_4089	0.23	+2.2
4,265,221	-		Psest_4089	0.23	+0.1
4,265,221	-		Psest_4089	0.23	-1.8
4,265,223	+		Psest_4089	0.23	+0.1
4,265,223	+		Psest_4089	0.23	-0.6
4,265,223	+		Psest_4089	0.23	-1.2
4,265,223	+		Psest_4089	0.23	-1.3
4,265,223	+		Psest_4089	0.23	-0.2
4,265,224	-		Psest_4089	0.23	+0.6
4,265,224	-		Psest_4089	0.23	+1.0
4,265,224	-		Psest_4089	0.23	+0.4
4,265,394	+		Psest_4089	0.35	-1.8
4,265,410	-		Psest_4089	0.36	+1.0
4,265,551	-		Psest_4089	0.46	+0.6
4,265,554	-		Psest_4089	0.46	-0.2
4,265,778	+		Psest_4089	0.62	-0.2
4,265,779	-		Psest_4089	0.62	-1.6
4,265,781	+		Psest_4089	0.62	-1.7
4,265,781	+		Psest_4089	0.62	-1.8
4,265,781	+		Psest_4089	0.62	-2.3
4,265,782	-		Psest_4089	0.62	+1.2
4,265,782	-		Psest_4089	0.62	-0.1
4,265,782	-		Psest_4089	0.62	-0.2
4,265,782	-		Psest_4089	0.62	-0.6
4,265,782	-		Psest_4089	0.62	-0.7
4,265,782	-		Psest_4089	0.62	-1.1
4,265,877	+		Psest_4089	0.69	-0.4
4,265,878	-		Psest_4089	0.69	-0.6
4,265,878	-		Psest_4089	0.69	+1.1
4,265,878	-		Psest_4089	0.69	-0.4
4,266,234	+				-0.2
4,266,234	+				+0.2
4,266,234	+				-0.2
4,266,234	+				+0.0
4,266,234	+				-0.2
4,266,235	-				-2.4
4,266,235	-				+0.4
4,266,235	-				-1.2
4,266,385	+				-0.4
4,266,421	+				-0.3
4,266,436	+				-1.7
4,266,449	+				-1.9
4,266,449	+				-1.3
4,266,449	+				-2.1
4,266,450	-				-1.6
4,266,560	+				-4.2
4,266,561	-				-2.2
4,266,561	-				+0.0
4,266,561	-				-1.7
4,266,561	-				+0.9
4,266,739	-				+0.4
4,266,739	-				-3.0
4,266,821	+				-0.4
4,266,822	-				-1.5
4,266,822	-				-0.5
4,266,823	+				-1.0
4,266,823	+				-1.1
4,266,824	-				+0.0
4,266,824	-				+0.1
4,266,824	-				+0.0
4,266,824	-				-0.4
4,266,824	-				-0.9
4,266,824	-				+0.4
4,266,825	+				-0.6
4,266,825	+				-1.6
4,266,826	-				+0.2
4,266,978	-		Psest_4090	0.17	+0.6
4,266,978	-		Psest_4090	0.17	-1.3
4,267,031	+		Psest_4090	0.26	-1.2
4,267,032	-		Psest_4090	0.26	+0.6