Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3646

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
3,806,155	+				+1.7
3,806,155	+				-1.9
3,806,155	+				-1.9
3,806,156	-				-1.1
3,806,156	-				+0.1
3,806,156	-				-1.3
3,806,156	-				+0.0
3,806,239	+		Psest_3645	0.18	-2.4
3,806,239	+		Psest_3645	0.18	-2.9
3,806,240	-		Psest_3645	0.18	-2.0
3,806,240	-		Psest_3645	0.18	-0.9
3,806,240	-		Psest_3645	0.18	-2.8
3,806,240	-		Psest_3645	0.18	-0.1
3,806,328	-		Psest_3645	0.39	-4.0
3,806,328	-		Psest_3645	0.39	-2.6
3,806,328	-		Psest_3645	0.39	-2.1
3,806,331	+		Psest_3645	0.40	-2.0
3,806,331	+		Psest_3645	0.40	-1.3
3,806,331	+		Psest_3645	0.40	-1.7
3,806,331	+		Psest_3645	0.40	-2.5
3,806,331	+		Psest_3645	0.40	-0.9
3,806,331	+		Psest_3645	0.40	+0.5
3,806,331	+		Psest_3645	0.40	-1.7
3,806,331	+		Psest_3645	0.40	-2.4
3,806,332	-		Psest_3645	0.40	-3.1
3,806,332	-		Psest_3645	0.40	-0.3
3,806,332	-		Psest_3645	0.40	-2.1
3,806,332	-		Psest_3645	0.40	-2.4
3,806,332	-		Psest_3645	0.40	-1.5
3,806,332	-		Psest_3645	0.40	-3.2
3,806,332	-		Psest_3645	0.40	-2.5
3,806,332	-		Psest_3645	0.40	-3.4
3,806,381	+		Psest_3645	0.52	-0.7
3,806,418	+		Psest_3645	0.60	-2.6
3,806,418	+		Psest_3645	0.60	-3.4
3,806,418	+		Psest_3645	0.60	-1.6
3,806,418	+		Psest_3645	0.60	-0.0
3,806,419	-		Psest_3645	0.61	-1.7
3,806,419	-		Psest_3645	0.61	-1.3
3,806,419	-		Psest_3645	0.61	-0.6
3,806,419	-		Psest_3645	0.61	-1.9
3,806,429	+		Psest_3645	0.63	-1.9
3,806,429	+		Psest_3645	0.63	-3.1
3,806,430	-		Psest_3645	0.63	-0.5
3,806,430	-		Psest_3645	0.63	+0.6
3,806,451	+		Psest_3645	0.68	-0.6
3,806,451	+		Psest_3645	0.68	-1.1
3,806,451	+		Psest_3645	0.68	-3.1
3,806,452	-		Psest_3645	0.68	-1.1
3,806,483	+		Psest_3645	0.76	-1.1
3,806,613	+				-2.0
3,806,614	-				+0.0
3,806,618	+				-1.4
3,806,619	-				-1.1
3,806,632	-				-1.5
3,806,632	-				+0.1
3,806,649	+				-0.9
3,806,649	+				-1.7
3,806,649	+				-1.7
3,806,649	+				-0.2
3,806,650	-				-1.2
3,806,722	-				-3.1
3,806,751	+				-0.6
3,806,751	+				-0.4
3,806,751	+				-0.7
3,806,751	+				+0.6
3,806,752	-				-0.4
3,806,752	-				+0.9
3,806,752	-				-3.0
3,806,752	-				-0.2
3,806,752	-				+0.6
3,806,752	-				-0.6
3,806,752	-				-0.9
3,806,752	-				+0.6
3,806,752	-				+0.7
3,806,752	-				-0.9
3,806,752	-				-1.6
3,806,753	+				-0.9
3,806,754	-				+1.5
3,806,754	-				-0.5
3,806,754	-				-1.7
3,806,754	-				-0.6
3,806,754	-				-1.8
3,806,759	+				-1.7
3,806,759	+				+2.0
3,806,770	+				-0.4
3,806,771	-				-0.9
3,806,778	-				+0.2
3,806,778	-				+0.1
3,806,778	-				-1.6
3,806,778	-				-2.1
3,806,778	-				-0.6
3,806,782	-				-0.4
3,806,802	+				-0.9
3,806,802	+				-1.3
3,806,802	+				-2.7
3,806,802	+				-2.1
3,806,802	+				-2.2
3,806,803	-				-1.2
3,806,803	-				-1.6
3,806,803	-				-1.4
3,806,803	-				-1.6
3,806,806	+				-1.7
3,806,806	+				-0.9
3,806,806	+				+0.7
3,806,806	+				-2.0
3,806,806	+				-1.0
3,806,806	+				-1.8
3,806,806	+				-1.7
3,806,807	-				-2.6
3,806,807	-				-0.5
3,806,807	-				-0.5
3,806,807	-				-1.5
3,806,807	-				-0.8
3,806,807	-				+1.2
3,806,807	-				-0.9
3,806,807	-				-1.9
3,806,807	-				-0.8
3,806,807	-				-1.3
3,806,807	-				-0.9
3,806,826	+				+0.4
3,806,826	+				-3.3
3,806,827	-				-1.6
3,806,861	-				-1.3
3,806,861	-				-1.4
3,806,870	+		Psest_3646	0.11	-2.4
3,806,894	+		Psest_3646	0.15	-1.9
3,806,895	-		Psest_3646	0.15	-2.1
3,806,953	+		Psest_3646	0.24	+0.7
3,806,990	+		Psest_3646	0.30	+1.0
3,807,107	+		Psest_3646	0.48	+0.3
3,807,107	+		Psest_3646	0.48	-0.1
3,807,107	+		Psest_3646	0.48	+0.1
3,807,108	-		Psest_3646	0.48	-1.5
3,807,108	-		Psest_3646	0.48	-2.2
3,807,108	-		Psest_3646	0.48	-1.1
3,807,401	+				+0.7
3,807,402	-				-1.2
3,807,540	+				-1.7
3,807,541	-				-0.3
3,807,541	-				-1.9
3,807,560	+				+1.2
3,807,610	-		Psest_3647	0.14	-0.3
3,807,620	+		Psest_3647	0.16	+0.7
3,807,621	-		Psest_3647	0.16	+0.9
3,807,737	-		Psest_3647	0.30	-1.9
3,807,869	-		Psest_3647	0.45	+0.2
3,807,899	+		Psest_3647	0.49	-3.7
3,807,899	+		Psest_3647	0.49	-0.4
3,807,900	-		Psest_3647	0.49	-1.4
3,807,900	-		Psest_3647	0.49	-0.1
3,807,900	-		Psest_3647	0.49	-1.8
3,808,008	+		Psest_3647	0.62	-0.3
3,808,008	+		Psest_3647	0.62	-0.6
3,808,009	-		Psest_3647	0.62	-1.7
3,808,077	+		Psest_3647	0.70	-1.3
3,808,351	+				-1.7