Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33900

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
3,553,407	-		PGA1_c33880	0.67	+0.1
3,553,593	+		PGA1_c33880	0.82	+0.7
3,553,601	-		PGA1_c33880	0.82	-1.8
3,553,626	+		PGA1_c33880	0.85	-2.2
3,553,633	-		PGA1_c33880	0.85	-0.7
3,553,672	-		PGA1_c33880	0.88	+0.7
3,553,693	-				-0.5
3,553,693	-				+0.7
3,553,707	+				-0.1
3,553,707	-				-0.2
3,553,744	+				-0.2
3,553,767	+				-1.1
3,553,800	+				+1.1
3,553,808	-				+0.9
3,553,808	-				+0.2
3,553,821	+				-0.7
3,553,821	+				-1.8
3,553,821	+				-1.1
3,553,829	-				-1.6
3,553,829	-				+0.1
3,553,854	+				+0.3
3,553,859	+				+1.2
3,553,898	+		PGA1_c33890	0.12	-1.2
3,553,898	+		PGA1_c33890	0.12	+0.5
3,553,898	+		PGA1_c33890	0.12	+0.5
3,553,898	+		PGA1_c33890	0.12	+0.5
3,554,032	-		PGA1_c33890	0.42	-0.6
3,554,046	-		PGA1_c33890	0.45	+1.1
3,554,055	+		PGA1_c33890	0.47	-0.7
3,554,083	+		PGA1_c33890	0.54	+0.8
3,554,089	+		PGA1_c33890	0.55	-1.1
3,554,125	-		PGA1_c33890	0.63	-1.0
3,554,239	+		PGA1_c33890	0.89	+0.5
3,554,242	-		PGA1_c33890	0.90	+2.5
3,554,242	-		PGA1_c33890	0.90	+0.3
3,554,256	-				-0.5
3,554,285	+				+1.1
3,554,301	-				+0.3
3,554,357	-				+0.5
3,554,442	+				-0.8
3,554,450	-				-1.4
3,554,450	-				+0.3
3,554,450	-				-0.2
3,554,460	-				-1.3
3,554,460	-				-0.7
3,554,460	-				-3.2
3,554,460	-				+1.1
3,554,460	-				-1.6
3,554,479	+				-0.8
3,554,479	+				-1.0
3,554,487	-				-0.8
3,554,487	-				-0.6
3,554,563	-		PGA1_c33900	0.12	-0.4
3,554,639	-		PGA1_c33900	0.17	-0.5
3,554,639	-		PGA1_c33900	0.17	-0.4
3,554,654	+		PGA1_c33900	0.18	-0.2
3,554,661	+		PGA1_c33900	0.18	-1.8
3,554,661	+		PGA1_c33900	0.18	-1.5
3,554,662	-		PGA1_c33900	0.18	-0.5
3,554,733	+		PGA1_c33900	0.23	+2.0
3,554,733	+		PGA1_c33900	0.23	-3.0
3,554,741	-		PGA1_c33900	0.24	-1.2
3,554,754	+		PGA1_c33900	0.25	-0.9
3,554,762	-		PGA1_c33900	0.25	-0.6
3,554,832	+		PGA1_c33900	0.30	-0.9
3,554,849	+		PGA1_c33900	0.31	-0.4
3,554,857	-		PGA1_c33900	0.31	-2.0
3,554,871	-		PGA1_c33900	0.32	-0.6
3,554,942	-		PGA1_c33900	0.37	-2.0
3,554,994	-		PGA1_c33900	0.41	-1.0
3,554,997	+		PGA1_c33900	0.41	+0.2
3,555,066	-		PGA1_c33900	0.45	-0.8
3,555,092	-		PGA1_c33900	0.47	-1.1
3,555,094	-		PGA1_c33900	0.47	+3.1
3,555,104	-		PGA1_c33900	0.48	-0.6
3,555,130	-		PGA1_c33900	0.50	-2.7
3,555,154	+		PGA1_c33900	0.51	-1.7
3,555,154	+		PGA1_c33900	0.51	-3.2
3,555,154	+		PGA1_c33900	0.51	+5.1
3,555,162	-		PGA1_c33900	0.52	-0.1
3,555,228	+		PGA1_c33900	0.56	+1.5
3,555,244	-		PGA1_c33900	0.57	-2.9
3,555,251	-		PGA1_c33900	0.58	-1.7
3,555,263	+		PGA1_c33900	0.58	-3.2
3,555,292	+		PGA1_c33900	0.60	-1.3
3,555,320	-		PGA1_c33900	0.62	-0.8
3,555,371	+		PGA1_c33900	0.66	-2.4
3,555,371	+		PGA1_c33900	0.66	+0.6
3,555,371	+		PGA1_c33900	0.66	-0.7
3,555,379	-		PGA1_c33900	0.66	-2.0
3,555,379	-		PGA1_c33900	0.66	-1.0
3,555,379	-		PGA1_c33900	0.66	-1.7
3,555,379	-		PGA1_c33900	0.66	+0.1
3,555,379	-		PGA1_c33900	0.66	-0.9
3,555,393	-		PGA1_c33900	0.67	-2.0
3,555,411	-		PGA1_c33900	0.68	-0.4
3,555,467	-		PGA1_c33900	0.72	+0.1
3,555,515	-		PGA1_c33900	0.75	-0.8
3,555,597	+		PGA1_c33900	0.81	-2.9
3,555,617	+		PGA1_c33900	0.82	-2.6
3,555,635	-		PGA1_c33900	0.83	-1.0
3,555,686	+		PGA1_c33900	0.86	+1.8
3,555,698	+		PGA1_c33900	0.87	-0.5
3,555,759	-				+0.5
3,555,764	-				-0.9
3,555,783	+				-0.7
3,555,889	+				-1.4
3,555,891	-				+0.2
3,555,918	+				-1.6
3,555,945	+		PGA1_c33910	0.10	-0.8
3,555,965	+		PGA1_c33910	0.14	+0.2
3,556,046	-		PGA1_c33910	0.27	-0.3
3,556,056	+		PGA1_c33910	0.29	-0.2
3,556,069	-		PGA1_c33910	0.31	-0.4
3,556,079	+		PGA1_c33910	0.33	-2.8
3,556,101	+		PGA1_c33910	0.37	-1.6
3,556,228	+		PGA1_c33910	0.58	-1.0
3,556,243	+		PGA1_c33910	0.61	-0.2
3,556,312	+		PGA1_c33910	0.73	-3.1
3,556,346	+		PGA1_c33910	0.79	-3.6
3,556,388	+		PGA1_c33910	0.86	+0.9
3,556,421	-				-2.6
3,556,439	+				+0.3
3,556,449	+				-2.2
3,556,524	+				-1.9
3,556,525	+				-0.6
3,556,525	+				-0.8
3,556,525	+				-2.4
3,556,560	+				-0.6
3,556,622	-				-1.2
3,556,671	-		PGA1_c33920	0.12	-2.0
3,556,783	+		PGA1_c33920	0.23	-1.1
3,556,869	-		PGA1_c33920	0.31	-0.4