Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33750

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
3,537,181	+		PGA1_c33740	0.22	-0.8
3,537,201	-		PGA1_c33740	0.24	+0.1
3,537,218	+		PGA1_c33740	0.26	-0.3
3,537,225	+		PGA1_c33740	0.27	+2.6
3,537,226	+		PGA1_c33740	0.27	-3.2
3,537,231	+		PGA1_c33740	0.28	+1.0
3,537,234	-		PGA1_c33740	0.28	+0.8
3,537,236	+		PGA1_c33740	0.28	+0.4
3,537,238	-		PGA1_c33740	0.28	-2.0
3,537,307	+		PGA1_c33740	0.36	+2.5
3,537,313	+		PGA1_c33740	0.37	+0.5
3,537,313	+		PGA1_c33740	0.37	-0.1
3,537,321	-		PGA1_c33740	0.38	+1.4
3,537,361	-		PGA1_c33740	0.42	-1.1
3,537,368	+		PGA1_c33740	0.43	+0.5
3,537,403	-		PGA1_c33740	0.47	-0.3
3,537,438	+		PGA1_c33740	0.51	-1.9
3,537,438	+		PGA1_c33740	0.51	+0.5
3,537,438	+		PGA1_c33740	0.51	+0.9
3,537,446	-		PGA1_c33740	0.52	+1.9
3,537,456	-		PGA1_c33740	0.53	+0.2
3,537,463	-		PGA1_c33740	0.54	-1.7
3,537,463	-		PGA1_c33740	0.54	-1.4
3,537,463	-		PGA1_c33740	0.54	+1.8
3,537,468	+		PGA1_c33740	0.54	-0.2
3,537,468	+		PGA1_c33740	0.54	+0.4
3,537,469	-		PGA1_c33740	0.55	-0.1
3,537,471	+		PGA1_c33740	0.55	+0.1
3,537,476	-		PGA1_c33740	0.55	-0.3
3,537,476	-		PGA1_c33740	0.55	-0.9
3,537,476	-		PGA1_c33740	0.55	-2.0
3,537,476	-		PGA1_c33740	0.55	-0.8
3,537,476	-		PGA1_c33740	0.55	-1.3
3,537,476	-		PGA1_c33740	0.55	-0.2
3,537,479	+		PGA1_c33740	0.56	+0.6
3,537,479	+		PGA1_c33740	0.56	+0.8
3,537,479	+		PGA1_c33740	0.56	+0.8
3,537,487	-		PGA1_c33740	0.57	+0.2
3,537,506	-		PGA1_c33740	0.59	-0.5
3,537,506	-		PGA1_c33740	0.59	-0.2
3,537,607	+		PGA1_c33740	0.70	+0.2
3,537,615	-		PGA1_c33740	0.71	+1.2
3,537,627	+		PGA1_c33740	0.72	-0.7
3,537,629	+		PGA1_c33740	0.73	-3.0
3,537,637	-		PGA1_c33740	0.74	+1.6
3,537,637	-		PGA1_c33740	0.74	-0.5
3,537,674	+		PGA1_c33740	0.78	+0.7
3,537,682	+		PGA1_c33740	0.79	+0.2
3,537,682	+		PGA1_c33740	0.79	+1.4
3,537,827	-				+0.7
3,537,859	+				+0.5
3,537,859	+				-2.1
3,537,867	-				-2.2
3,537,872	-				+0.6
3,537,874	-				-1.6
3,537,874	-				-1.2
3,537,876	+				+1.2
3,537,876	+				-0.0
3,537,876	+				+0.5
3,537,876	+				-1.3
3,537,876	+				+0.3
3,537,876	+				-1.4
3,537,876	+				+0.1
3,537,876	+				-0.6
3,537,876	+				-1.1
3,537,876	+				-0.1
3,537,884	-				-0.7
3,537,884	-				+1.6
3,537,884	-				-1.1
3,537,884	-				-0.1
3,537,884	-				+0.5
3,537,884	-				+0.2
3,537,886	+				+1.3
3,537,886	+				+1.9
3,537,900	+				-0.1
3,537,905	+				+0.6
3,537,905	+				-2.5
3,537,905	+				+0.6
3,537,913	-				-1.6
3,537,918	-				+0.0
3,537,969	-				+0.7
3,537,982	-				+0.7
3,538,006	+				-0.2
3,538,006	+				-0.6
3,538,006	+				+0.6
3,538,006	+				-1.0
3,538,006	+				-3.3
3,538,006	+				+0.2
3,538,006	+				-0.5
3,538,006	+				-2.0
3,538,006	+				-1.0
3,538,006	+				+1.4
3,538,006	+				-0.0
3,538,006	+				-0.4
3,538,006	+				+0.3
3,538,014	-				+0.7
3,538,014	-				-0.3
3,538,014	-				+0.9
3,538,014	-				+1.2
3,538,014	-				-0.6
3,538,014	-				-0.8
3,538,014	-				-0.1
3,538,014	-				+0.6
3,538,014	-				-1.2
3,538,014	-				+0.2
3,538,014	-				-0.4
3,538,014	-				-1.9
3,538,014	-				+0.8
3,538,014	-				+0.3
3,538,014	-				-0.5
3,538,014	-				+0.4
3,538,014	-				-0.4
3,538,014	-				-0.8
3,538,014	-				+0.3
3,538,014	-				+1.7
3,538,014	-				-0.6
3,538,014	-				-0.3
3,538,014	-				+0.8
3,538,014	-				-1.2
3,538,014	-				+0.8
3,538,014	-				+0.8
3,538,014	-				+0.2
3,538,014	-				-0.5
3,538,014	-				+1.0
3,538,014	-				+1.7
3,538,014	-				-0.0
3,538,014	-				+2.0
3,538,014	-				+3.2
3,538,023	-				-0.4
3,538,023	-				-0.5
3,538,025	+				-0.7
3,538,030	+				-0.2
3,538,033	-				-1.1
3,538,038	-				+0.7
3,538,044	+				-1.0
3,538,044	+				+0.3
3,538,049	+				+0.0
3,538,049	+				-2.0
3,538,049	+				+0.4
3,538,049	+				-0.3
3,538,049	+				+1.5
3,538,049	+				+0.1
3,538,052	-				-0.6
3,538,052	-				-0.4
3,538,052	-				-1.3
3,538,054	+				+1.2
3,538,055	+				+0.5
3,538,057	-				-2.2
3,538,057	-				-0.2
3,538,063	-				-1.3
3,538,070	-				+0.2
3,538,117	+				+1.2
3,538,117	+				-0.3
3,538,117	+				+1.2
3,538,117	+				+0.5
3,538,117	+				+1.9
3,538,117	+				-0.2
3,538,125	+				+0.2
3,538,125	+				+0.7
3,538,125	+				+0.8
3,538,125	+				+0.7
3,538,125	-				-0.3
3,538,125	-				+0.6
3,538,125	-				-1.0
3,538,128	-				+0.5
3,538,176	+				+0.2
3,538,176	-				-0.2
3,538,178	-				+1.2
3,538,178	-				+0.7
3,538,193	+				+0.1
3,538,214	+				-1.5
3,538,215	+				+1.2
3,538,222	-				+0.7
3,538,222	-				-1.1
3,538,222	-				-0.2
3,538,222	-				-1.0
3,538,241	-		PGA1_c33750	0.11	+0.5
3,538,251	-		PGA1_c33750	0.12	-1.9
3,538,262	+		PGA1_c33750	0.13	-2.2
3,538,262	+		PGA1_c33750	0.13	-1.1
3,538,301	+		PGA1_c33750	0.17	+0.7
3,538,314	+		PGA1_c33750	0.18	-3.0
3,538,342	+		PGA1_c33750	0.21	+0.2
3,538,347	+		PGA1_c33750	0.22	-1.1
3,538,352	+		PGA1_c33750	0.22	+0.5
3,538,352	+		PGA1_c33750	0.22	-0.7
3,538,352	+		PGA1_c33750	0.22	+0.3
3,538,352	+		PGA1_c33750	0.22	-0.4
3,538,352	+		PGA1_c33750	0.22	-0.4
3,538,352	+		PGA1_c33750	0.22	+0.7
3,538,352	+		PGA1_c33750	0.22	+0.3
3,538,352	+		PGA1_c33750	0.22	-1.6
3,538,352	+		PGA1_c33750	0.22	-0.6
3,538,352	+		PGA1_c33750	0.22	-0.3
3,538,352	+		PGA1_c33750	0.22	-0.7
3,538,352	+		PGA1_c33750	0.22	-1.2
3,538,352	+		PGA1_c33750	0.22	-0.2
3,538,352	+		PGA1_c33750	0.22	-2.0
3,538,352	+		PGA1_c33750	0.22	-0.3
3,538,352	+		PGA1_c33750	0.22	-1.6
3,538,355	-		PGA1_c33750	0.23	-0.1
3,538,360	-		PGA1_c33750	0.23	+0.7
3,538,360	-		PGA1_c33750	0.23	-0.4
3,538,360	-		PGA1_c33750	0.23	-0.3
3,538,360	-		PGA1_c33750	0.23	+1.1
3,538,360	-		PGA1_c33750	0.23	-3.2
3,538,360	-		PGA1_c33750	0.23	+0.1
3,538,360	-		PGA1_c33750	0.23	-1.6
3,538,360	-		PGA1_c33750	0.23	+0.6
3,538,360	-		PGA1_c33750	0.23	+0.0
3,538,360	-		PGA1_c33750	0.23	+1.1
3,538,360	-		PGA1_c33750	0.23	-3.0
3,538,360	-		PGA1_c33750	0.23	+0.4
3,538,360	-		PGA1_c33750	0.23	-0.3
3,538,360	-		PGA1_c33750	0.23	-1.0
3,538,360	-		PGA1_c33750	0.23	-0.7
3,538,360	-		PGA1_c33750	0.23	+0.3
3,538,360	-		PGA1_c33750	0.23	-0.2
3,538,360	-		PGA1_c33750	0.23	-0.3
3,538,360	-		PGA1_c33750	0.23	-1.7
3,538,360	-		PGA1_c33750	0.23	+1.7
3,538,360	-		PGA1_c33750	0.23	-0.0
3,538,360	-		PGA1_c33750	0.23	+0.7
3,538,360	-		PGA1_c33750	0.23	-0.4
3,538,360	-		PGA1_c33750	0.23	+0.1
3,538,360	-		PGA1_c33750	0.23	-3.0
3,538,375	+		PGA1_c33750	0.25	+0.7
3,538,378	-		PGA1_c33750	0.25	+0.9
3,538,382	+		PGA1_c33750	0.25	-1.1
3,538,383	-		PGA1_c33750	0.25	-0.4
3,538,433	+		PGA1_c33750	0.31	-0.1
3,538,433	-		PGA1_c33750	0.31	-0.5
3,538,438	+		PGA1_c33750	0.31	-0.6
3,538,438	+		PGA1_c33750	0.31	-0.4
3,538,446	-		PGA1_c33750	0.32	-0.3
3,538,446	-		PGA1_c33750	0.32	-0.5
3,538,506	+		PGA1_c33750	0.38	+0.0
3,538,530	+		PGA1_c33750	0.41	-0.2
3,538,538	-		PGA1_c33750	0.42	+2.3
3,538,557	+		PGA1_c33750	0.43	-0.8
3,538,557	+		PGA1_c33750	0.43	+0.4
3,538,557	+		PGA1_c33750	0.43	-1.2
3,538,557	+		PGA1_c33750	0.43	-0.5
3,538,559	+		PGA1_c33750	0.44	+0.7
3,538,559	+		PGA1_c33750	0.44	-1.5
3,538,613	+		PGA1_c33750	0.49	-0.7
3,538,633	+		PGA1_c33750	0.51	+0.2
3,538,634	+		PGA1_c33750	0.51	-0.0
3,538,634	+		PGA1_c33750	0.51	-1.1
3,538,635	+		PGA1_c33750	0.52	+0.2
3,538,635	+		PGA1_c33750	0.52	-1.1
3,538,643	-		PGA1_c33750	0.52	+0.7
3,538,656	-		PGA1_c33750	0.54	+1.4
3,538,710	+		PGA1_c33750	0.59	+0.2
3,538,718	+		PGA1_c33750	0.60	+1.0
3,538,718	+		PGA1_c33750	0.60	-3.4
3,538,720	+		PGA1_c33750	0.60	+0.4
3,538,726	-		PGA1_c33750	0.61	-1.0
3,538,728	-		PGA1_c33750	0.61	+0.4
3,538,728	-		PGA1_c33750	0.61	-0.7
3,538,730	+		PGA1_c33750	0.61	-0.8
3,538,730	+		PGA1_c33750	0.61	-1.7
3,538,730	+		PGA1_c33750	0.61	+0.5
3,538,731	+		PGA1_c33750	0.61	-1.5
3,538,731	+		PGA1_c33750	0.61	-0.4
3,538,731	+		PGA1_c33750	0.61	+1.9
3,538,731	+		PGA1_c33750	0.61	-1.9
3,538,731	+		PGA1_c33750	0.61	+0.3
3,538,731	+		PGA1_c33750	0.61	+0.3
3,538,731	+		PGA1_c33750	0.61	+0.2
3,538,731	+		PGA1_c33750	0.61	-2.0
3,538,738	-		PGA1_c33750	0.62	-0.3
3,538,738	-		PGA1_c33750	0.62	+0.3
3,538,738	-		PGA1_c33750	0.62	-0.5
3,538,738	-		PGA1_c33750	0.62	-0.8
3,538,738	-		PGA1_c33750	0.62	+0.0
3,538,738	-		PGA1_c33750	0.62	-0.2
3,538,739	-		PGA1_c33750	0.62	-0.7
3,538,739	-		PGA1_c33750	0.62	-0.5
3,538,739	-		PGA1_c33750	0.62	-3.2
3,538,739	-		PGA1_c33750	0.62	-0.8
3,538,739	-		PGA1_c33750	0.62	+0.6
3,538,739	-		PGA1_c33750	0.62	+0.7
3,538,739	-		PGA1_c33750	0.62	-1.2
3,538,739	-		PGA1_c33750	0.62	-0.8
3,538,753	+		PGA1_c33750	0.64	-0.1
3,538,778	-		PGA1_c33750	0.66	+0.2
3,538,787	+		PGA1_c33750	0.67	-2.5
3,538,849	-		PGA1_c33750	0.74	-1.1
3,538,849	-		PGA1_c33750	0.74	-2.4
3,538,849	-		PGA1_c33750	0.74	+0.7
3,538,850	-		PGA1_c33750	0.74	-0.2
3,538,879	-		PGA1_c33750	0.77	+1.9
3,538,925	-		PGA1_c33750	0.82	-2.5
3,538,929	+		PGA1_c33750	0.82	-0.7
3,538,937	-		PGA1_c33750	0.83	+0.9
3,539,006	-				-1.1
3,539,019	+				+1.8
3,539,050	-				-0.4
3,539,065	-				+0.6
3,539,077	+				-2.0
3,539,078	+				+0.7
3,539,078	+				+0.1
3,539,083	+				+0.9
3,539,085	-				+0.3
3,539,086	-				-0.1
3,539,086	-				+0.2
3,539,086	-				+0.5
3,539,128	+				+1.0
3,539,138	+				+0.6
3,539,138	+				-1.2
3,539,138	+				+0.6
3,539,138	+				+0.8
3,539,141	-				+0.5
3,539,144	-				-1.5
3,539,146	-				-0.3
3,539,179	+				-0.7
3,539,179	+				+0.2
3,539,184	+				-0.8
3,539,187	-				-0.8
3,539,275	+				-1.3
3,539,275	+				+0.3
3,539,275	+				-1.0
3,539,275	+				+0.9
3,539,275	+				+0.5
3,539,280	+				+1.5
3,539,280	+				-0.2
3,539,280	+				-0.5
3,539,280	+				-0.0
3,539,283	-				+0.7
3,539,283	-				+0.6
3,539,283	-				-2.4
3,539,283	-				+0.9
3,539,283	-				-2.7
3,539,283	-				+0.3
3,539,283	-				+0.8
3,539,287	+				+1.8
3,539,288	-				-0.1
3,539,288	-				+0.8
3,539,309	+		PGA1_c33760	0.12	+0.2
3,539,314	+		PGA1_c33760	0.12	+0.1
3,539,314	+		PGA1_c33760	0.12	+1.2
3,539,314	+		PGA1_c33760	0.12	+0.2
3,539,356	+		PGA1_c33760	0.16	-0.2
3,539,412	+		PGA1_c33760	0.21	+0.9
3,539,423	+		PGA1_c33760	0.23	+2.2
3,539,451	+		PGA1_c33760	0.25	+0.8
3,539,459	+		PGA1_c33760	0.26	-0.8
3,539,519	+		PGA1_c33760	0.32	-0.7
3,539,568	-		PGA1_c33760	0.36	-1.0
3,539,632	+		PGA1_c33760	0.42	+0.5
3,539,696	+		PGA1_c33760	0.48	-0.9
3,539,698	+		PGA1_c33760	0.49	-1.4
3,539,718	+		PGA1_c33760	0.50	-0.3
3,539,721	-		PGA1_c33760	0.51	+0.2
3,539,721	-		PGA1_c33760	0.51	-2.4
3,539,732	-		PGA1_c33760	0.52	-0.9
3,539,754	-		PGA1_c33760	0.54	-2.0
3,539,758	+		PGA1_c33760	0.54	+1.0
3,539,831	-		PGA1_c33760	0.61	-1.4
3,539,858	+		PGA1_c33760	0.64	+0.6
3,539,858	+		PGA1_c33760	0.64	+1.1
3,539,858	+		PGA1_c33760	0.64	-1.1
3,539,858	+		PGA1_c33760	0.64	+0.6
3,539,858	+		PGA1_c33760	0.64	-0.6
3,539,858	+		PGA1_c33760	0.64	-0.1
3,539,859	+		PGA1_c33760	0.64	-0.6
3,539,866	-		PGA1_c33760	0.64	+0.1
3,539,866	-		PGA1_c33760	0.64	+0.3
3,539,866	-		PGA1_c33760	0.64	+0.2
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