Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3353

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
3,520,704	+		Psest_3351	0.67	+0.9
3,520,704	+		Psest_3351	0.67	+2.9
3,520,705	-		Psest_3351	0.67	+3.3
3,520,995	+		Psest_3351	0.86	-0.0
3,520,995	+		Psest_3351	0.86	+3.1
3,520,995	+		Psest_3351	0.86	+0.9
3,520,995	+		Psest_3351	0.86	+2.1
3,520,995	+		Psest_3351	0.86	+2.2
3,520,995	+		Psest_3351	0.86	+1.6
3,520,995	+		Psest_3351	0.86	+2.8
3,520,995	+		Psest_3351	0.86	+1.3
3,520,995	+		Psest_3351	0.86	+1.5
3,520,996	-		Psest_3351	0.86	+2.6
3,520,996	-		Psest_3351	0.86	+1.4
3,520,996	-		Psest_3351	0.86	+0.1
3,520,996	-		Psest_3351	0.86	+2.8
3,521,133	+				+3.4
3,521,133	+				+0.6
3,521,226	-				-0.9
3,521,226	-				-1.1
3,521,382	+		Psest_3352	0.31	-0.8
3,521,382	+		Psest_3352	0.31	+1.3
3,521,382	+		Psest_3352	0.31	-1.4
3,521,382	+		Psest_3352	0.31	-0.7
3,521,382	+		Psest_3352	0.31	-1.1
3,521,382	+		Psest_3352	0.31	+3.9
3,521,382	+		Psest_3352	0.31	-0.3
3,521,383	-		Psest_3352	0.32	+0.6
3,521,383	-		Psest_3352	0.32	+1.2
3,521,383	-		Psest_3352	0.32	+2.6
3,521,383	-		Psest_3352	0.32	+1.2
3,521,383	-		Psest_3352	0.32	+1.9
3,521,383	-		Psest_3352	0.32	+0.4
3,521,462	+		Psest_3352	0.56	+1.7
3,521,462	+		Psest_3352	0.56	+0.2
3,521,462	+		Psest_3352	0.56	-0.8
3,521,462	+		Psest_3352	0.56	+1.1
3,521,462	+		Psest_3352	0.56	-0.6
3,521,463	-		Psest_3352	0.56	+0.5
3,521,463	-		Psest_3352	0.56	+0.5
3,521,463	-		Psest_3352	0.56	+0.6
3,521,556	+		Psest_3352	0.85	+0.3
3,521,557	-		Psest_3352	0.85	+0.7
3,521,658	+				-1.1
3,521,658	+				-0.0
3,521,658	+				-0.6
3,521,659	-				+1.1
3,521,659	-				+0.4
3,521,682	+				+1.9
3,521,682	+				-0.7
3,521,740	+				-0.3
3,521,740	+				+0.3
3,521,740	+				-0.2
3,521,740	+				-0.9
3,521,740	+				-1.4
3,521,740	+				+1.1
3,521,740	+				-0.7
3,521,741	-				+1.1
3,521,741	-				-0.3
3,521,741	-				-0.9
3,521,741	-				+1.1
3,521,741	-				-0.9
3,521,741	-				+0.2
3,521,785	+				+0.8
3,521,786	-				-0.1
3,521,786	-				-0.1
3,522,103	+		Psest_3353	0.24	-0.4
3,522,103	+		Psest_3353	0.24	-0.6
3,522,139	+		Psest_3353	0.26	-0.9
3,522,139	+		Psest_3353	0.26	+0.2
3,522,196	-		Psest_3353	0.29	+0.2
3,522,286	+		Psest_3353	0.35	+2.1
3,522,286	+		Psest_3353	0.35	-1.5
3,522,286	+		Psest_3353	0.35	+1.6
3,522,286	+		Psest_3353	0.35	+0.2
3,522,286	+		Psest_3353	0.35	+0.1
3,522,286	+		Psest_3353	0.35	+0.4
3,522,286	+		Psest_3353	0.35	-2.4
3,522,286	+		Psest_3353	0.35	+0.7
3,522,286	+		Psest_3353	0.35	-0.4
3,522,286	+		Psest_3353	0.35	-0.9
3,522,287	-		Psest_3353	0.35	-1.3
3,522,287	-		Psest_3353	0.35	-0.7
3,522,287	-		Psest_3353	0.35	-1.1
3,522,287	-		Psest_3353	0.35	+0.2
3,522,287	-		Psest_3353	0.35	+0.9
3,522,408	+		Psest_3353	0.42	-0.7
3,522,423	+		Psest_3353	0.42	-0.1
3,522,512	-		Psest_3353	0.48	-1.8
3,522,512	-		Psest_3353	0.48	+0.1
3,522,520	+		Psest_3353	0.48	-0.3
3,522,520	+		Psest_3353	0.48	+0.7
3,522,676	+		Psest_3353	0.57	-0.5
3,522,676	+		Psest_3353	0.57	-1.6
3,522,676	+		Psest_3353	0.57	+1.3
3,522,676	+		Psest_3353	0.57	-0.1
3,522,676	+		Psest_3353	0.57	-0.7
3,522,677	-		Psest_3353	0.57	+0.7
3,522,677	-		Psest_3353	0.57	+1.4
3,522,677	-		Psest_3353	0.57	+0.7
3,522,677	-		Psest_3353	0.57	-0.3
3,522,677	-		Psest_3353	0.57	+0.5
3,522,703	+		Psest_3353	0.59	-1.9
3,522,703	+		Psest_3353	0.59	-0.1
3,522,703	+		Psest_3353	0.59	-2.4
3,522,703	+		Psest_3353	0.59	-1.5
3,522,759	-		Psest_3353	0.62	-0.0
3,522,939	-		Psest_3353	0.72	+0.6
3,523,085	+		Psest_3353	0.80	+1.9
3,523,086	-		Psest_3353	0.81	+1.1
3,523,446	+				-0.4
3,523,885	+		Psest_3354	0.47	+1.9
3,523,928	+		Psest_3354	0.51	+1.6
3,523,928	+		Psest_3354	0.51	+2.9
3,524,279	+		Psest_3354	0.89	+1.7
3,524,279	+		Psest_3354	0.89	+2.9
3,524,279	+		Psest_3354	0.89	+2.1
3,524,279	+		Psest_3354	0.89	+0.9
3,524,279	+		Psest_3354	0.89	+1.6
3,524,279	+		Psest_3354	0.89	+1.9
3,524,279	+		Psest_3354	0.89	+2.5
3,524,279	+		Psest_3354	0.89	+1.0
3,524,279	+		Psest_3354	0.89	-0.6
3,524,280	-		Psest_3354	0.89	+2.2