Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3322

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
3,483,764	+				-1.3
3,483,764	+				+1.6
3,483,765	-				+0.9
3,483,906	-		Psest_3321	0.16	+1.2
3,483,932	-		Psest_3321	0.20	-0.8
3,483,995	-		Psest_3321	0.27	+0.4
3,483,996	+		Psest_3321	0.27	-3.1
3,483,996	+		Psest_3321	0.27	-0.9
3,483,996	+		Psest_3321	0.27	+0.9
3,483,996	+		Psest_3321	0.27	-0.7
3,483,996	+		Psest_3321	0.27	-1.5
3,483,996	+		Psest_3321	0.27	-0.9
3,483,996	+		Psest_3321	0.27	+0.2
3,483,996	+		Psest_3321	0.27	-1.6
3,483,996	+		Psest_3321	0.27	-0.1
3,483,996	+		Psest_3321	0.27	-0.6
3,483,996	+		Psest_3321	0.27	-2.0
3,483,997	-		Psest_3321	0.27	+1.0
3,483,997	-		Psest_3321	0.27	+1.4
3,483,997	-		Psest_3321	0.27	-0.4
3,483,997	-		Psest_3321	0.27	+1.0
3,483,997	-		Psest_3321	0.27	+1.2
3,483,997	-		Psest_3321	0.27	+0.8
3,483,997	-		Psest_3321	0.27	+0.7
3,483,997	-		Psest_3321	0.27	+0.1
3,483,997	-		Psest_3321	0.27	-0.4
3,483,997	-		Psest_3321	0.27	-0.4
3,483,997	-		Psest_3321	0.27	-0.1
3,483,997	-		Psest_3321	0.27	+0.6
3,483,997	-		Psest_3321	0.27	-0.1
3,483,997	-		Psest_3321	0.27	+0.9
3,483,997	-		Psest_3321	0.27	+1.9
3,483,997	-		Psest_3321	0.27	+1.2
3,484,115	-		Psest_3321	0.41	-1.6
3,484,116	+		Psest_3321	0.41	-2.4
3,484,117	-		Psest_3321	0.41	+0.7
3,484,117	-		Psest_3321	0.41	-0.4
3,484,117	-		Psest_3321	0.41	-1.2
3,484,206	+		Psest_3321	0.52	-0.6
3,484,275	+		Psest_3321	0.60	-2.3
3,484,471	+		Psest_3321	0.83	-0.0
3,484,595	+				-0.1
3,484,596	-				+0.3
3,484,596	-				+0.4
3,484,720	+				-4.8
3,484,777	-				-4.0
3,484,848	+				-2.7
3,484,993	+				-4.0
3,484,993	+				-3.0
3,484,993	+				-1.9
3,484,993	+				-1.3
3,484,993	+				-3.7
3,484,994	-				-3.3
3,484,994	-				-1.2
3,484,994	-				-3.7
3,485,290	+		Psest_3322	0.17	-0.9
3,485,291	-		Psest_3322	0.17	-3.5
3,485,291	-		Psest_3322	0.17	-2.6
3,485,824	-		Psest_3322	0.31	-1.4
3,485,824	-		Psest_3322	0.31	-3.8
3,485,824	-		Psest_3322	0.31	-2.4
3,485,824	-		Psest_3322	0.31	-3.1
3,485,824	-		Psest_3322	0.31	-1.8
3,485,824	-		Psest_3322	0.31	-0.9
3,485,824	-		Psest_3322	0.31	-2.8
3,485,827	+		Psest_3322	0.31	-1.3
3,485,827	+		Psest_3322	0.31	-3.7
3,485,827	+		Psest_3322	0.31	-3.1
3,485,827	+		Psest_3322	0.31	-2.3
3,485,827	+		Psest_3322	0.31	-3.7
3,485,828	-		Psest_3322	0.31	-3.6
3,485,828	-		Psest_3322	0.31	-3.6
3,485,828	-		Psest_3322	0.31	-4.6
3,485,828	-		Psest_3322	0.31	-2.4
3,485,828	-		Psest_3322	0.31	-0.6
3,485,828	-		Psest_3322	0.31	-3.5
3,485,828	-		Psest_3322	0.31	-1.6
3,485,828	-		Psest_3322	0.31	-3.5
3,485,828	-		Psest_3322	0.31	-3.6
3,485,828	-		Psest_3322	0.31	-4.1
3,485,828	-		Psest_3322	0.31	-3.4
3,485,828	-		Psest_3322	0.31	-1.6
3,485,828	-		Psest_3322	0.31	-3.2
3,485,828	-		Psest_3322	0.31	-2.1
3,485,828	-		Psest_3322	0.31	-0.6
3,485,828	-		Psest_3322	0.31	-2.2
3,485,828	-		Psest_3322	0.31	-3.6
3,485,828	-		Psest_3322	0.31	-3.5
3,485,828	-		Psest_3322	0.31	-2.9
3,485,828	-		Psest_3322	0.31	-3.5
3,485,828	-		Psest_3322	0.31	-3.0
3,486,003	+		Psest_3322	0.35	-1.2
3,486,004	-		Psest_3322	0.36	-1.1
3,486,147	+		Psest_3322	0.39	-1.1
3,486,148	-		Psest_3322	0.39	-2.7
3,486,611	-		Psest_3322	0.51	-2.9
3,486,611	-		Psest_3322	0.51	-1.2
3,486,662	+		Psest_3322	0.53	-1.5
3,486,676	-		Psest_3322	0.53	-3.0
3,486,676	-		Psest_3322	0.53	-2.8
3,486,676	-		Psest_3322	0.53	-2.1
3,486,676	-		Psest_3322	0.53	-1.1
3,486,676	-		Psest_3322	0.53	-3.3
3,486,748	+		Psest_3322	0.55	-1.8
3,486,749	-		Psest_3322	0.55	-2.9
3,486,749	-		Psest_3322	0.55	-2.0
3,486,812	-		Psest_3322	0.57	-2.1
3,486,837	+		Psest_3322	0.57	-2.6
3,486,837	+		Psest_3322	0.57	+0.4
3,486,837	+		Psest_3322	0.57	-2.8
3,486,837	+		Psest_3322	0.57	-1.7
3,486,837	+		Psest_3322	0.57	-2.9
3,486,838	-		Psest_3322	0.57	-3.3
3,486,838	-		Psest_3322	0.57	-1.4
3,486,838	-		Psest_3322	0.57	-2.4
3,486,894	+		Psest_3322	0.59	-2.6
3,486,894	+		Psest_3322	0.59	-0.6
3,486,898	+		Psest_3322	0.59	-3.0
3,486,898	+		Psest_3322	0.59	-2.1
3,486,898	+		Psest_3322	0.59	-3.6
3,486,898	+		Psest_3322	0.59	-2.4
3,486,898	+		Psest_3322	0.59	-1.8
3,486,898	+		Psest_3322	0.59	-2.5
3,486,898	+		Psest_3322	0.59	-1.7
3,486,898	+		Psest_3322	0.59	+0.4
3,486,898	+		Psest_3322	0.59	-3.6
3,486,898	+		Psest_3322	0.59	-3.8
3,486,898	+		Psest_3322	0.59	-1.9
3,486,898	+		Psest_3322	0.59	-1.2
3,486,899	-		Psest_3322	0.59	-4.3
3,486,899	-		Psest_3322	0.59	-3.4
3,486,899	-		Psest_3322	0.59	-3.8
3,486,899	-		Psest_3322	0.59	-5.0
3,486,899	-		Psest_3322	0.59	-5.2
3,486,899	-		Psest_3322	0.59	-2.4
3,486,899	-		Psest_3322	0.59	-2.8
3,486,899	-		Psest_3322	0.59	-2.0
3,486,899	-		Psest_3322	0.59	+0.4
3,486,899	-		Psest_3322	0.59	-0.4
3,486,899	-		Psest_3322	0.59	-4.5
3,486,908	+		Psest_3322	0.59	-4.1
3,486,910	+		Psest_3322	0.59	-2.6
3,486,952	+		Psest_3322	0.60	-0.1
3,486,952	+		Psest_3322	0.60	-2.7
3,486,952	+		Psest_3322	0.60	-1.6
3,486,952	+		Psest_3322	0.60	-2.0
3,486,952	+		Psest_3322	0.60	-4.8
3,486,952	+		Psest_3322	0.60	-3.1
3,486,952	+		Psest_3322	0.60	-4.1
3,486,952	+		Psest_3322	0.60	-1.2
3,486,952	+		Psest_3322	0.60	+1.4
3,486,952	+		Psest_3322	0.60	+0.4
3,486,953	-		Psest_3322	0.60	-1.2
3,486,953	-		Psest_3322	0.60	-1.0
3,486,953	-		Psest_3322	0.60	-1.1
3,486,953	-		Psest_3322	0.60	-0.1
3,486,953	-		Psest_3322	0.60	-0.1
3,486,953	-		Psest_3322	0.60	-2.1
3,487,033	+		Psest_3322	0.63	-1.6
3,487,034	-		Psest_3322	0.63	-1.6
3,487,034	-		Psest_3322	0.63	-0.9
3,487,117	+		Psest_3322	0.65	-0.1
3,487,301	-		Psest_3322	0.70	-3.5
3,487,301	-		Psest_3322	0.70	-5.4
3,487,558	+		Psest_3322	0.76	-2.5
3,487,558	+		Psest_3322	0.76	-3.1
3,487,558	+		Psest_3322	0.76	-3.9
3,487,558	+		Psest_3322	0.76	-2.9
3,487,558	+		Psest_3322	0.76	-3.3
3,487,558	+		Psest_3322	0.76	-0.9
3,487,558	+		Psest_3322	0.76	-1.2
3,487,558	+		Psest_3322	0.76	-2.2
3,487,558	+		Psest_3322	0.76	-1.4
3,487,558	+		Psest_3322	0.76	-1.6
3,487,559	-		Psest_3322	0.76	-3.1
3,487,559	-		Psest_3322	0.76	-3.8
3,487,559	-		Psest_3322	0.76	-2.6
3,487,877	+		Psest_3322	0.85	-0.4
3,487,914	-		Psest_3322	0.86	-3.0
3,487,914	-		Psest_3322	0.86	-3.2
3,487,915	+		Psest_3322	0.86	+0.4
3,487,916	-		Psest_3322	0.86	-3.4
3,487,916	-		Psest_3322	0.86	-3.2
3,487,916	-		Psest_3322	0.86	-2.8
3,488,007	-		Psest_3322	0.88	-0.9
3,488,139	+				-1.1
3,488,140	-				-2.8
3,488,371	+				-2.3
3,488,371	+				-2.0
3,488,371	+				-3.0
3,488,372	-				-2.5
3,488,497	+				-1.4
3,488,497	+				-3.3
3,488,497	+				-0.1
3,488,497	+				-0.4
3,488,497	+				-0.6
3,488,497	+				-1.3
3,488,497	+				-3.1
3,488,497	+				-3.0
3,488,498	-				+1.9
3,488,498	-				+2.0
3,488,498	-				-0.9
3,488,525	+				-1.2
3,488,525	+				-0.4
3,488,526	-				+0.8
3,488,540	+				-0.4
3,488,540	+				-0.6
3,488,540	+				-1.2
3,488,541	-				+0.8
3,489,197	+		Psest_3323	0.47	-1.5
3,489,347	+		Psest_3323	0.58	+0.4
3,489,348	-		Psest_3323	0.58	+2.9
3,489,348	-		Psest_3323	0.58	-0.4