Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31410

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
3,281,105	-				-2.6
3,281,141	+				-0.4
3,281,185	+				-1.5
3,281,186	-				-0.3
3,281,226	+				-2.7
3,281,226	+				-0.4
3,281,226	+				-1.0
3,281,234	-				+0.3
3,281,287	+		PGA1_c31400	0.12	-0.0
3,281,344	-		PGA1_c31400	0.20	-0.0
3,281,346	+		PGA1_c31400	0.20	+1.6
3,281,370	-		PGA1_c31400	0.23	+0.1
3,281,404	-		PGA1_c31400	0.28	-0.4
3,281,414	-		PGA1_c31400	0.29	-0.8
3,281,419	+		PGA1_c31400	0.30	+0.6
3,281,487	-		PGA1_c31400	0.38	-1.7
3,281,494	+		PGA1_c31400	0.39	+2.2
3,281,502	-		PGA1_c31400	0.40	-0.2
3,281,502	-		PGA1_c31400	0.40	-1.1
3,281,586	-		PGA1_c31400	0.51	-0.9
3,281,617	+		PGA1_c31400	0.55	+0.9
3,281,617	+		PGA1_c31400	0.55	-0.6
3,281,625	-		PGA1_c31400	0.56	-2.2
3,281,686	+		PGA1_c31400	0.64	+0.9
3,281,696	-		PGA1_c31400	0.65	-0.4
3,281,733	+		PGA1_c31400	0.70	+0.4
3,281,734	+		PGA1_c31400	0.70	+1.6
3,281,762	+		PGA1_c31400	0.74	+0.2
3,281,762	+		PGA1_c31400	0.74	+1.1
3,281,770	-		PGA1_c31400	0.75	+2.0
3,281,770	-		PGA1_c31400	0.75	+1.1
3,281,770	-		PGA1_c31400	0.75	+0.8
3,281,770	-		PGA1_c31400	0.75	-0.7
3,281,777	-		PGA1_c31400	0.76	-0.9
3,281,832	+		PGA1_c31400	0.83	-0.7
3,281,832	+		PGA1_c31400	0.83	-2.0
3,281,897	+				+0.4
3,281,916	+				+0.7
3,281,924	-				-0.2
3,281,924	-				-2.0
3,281,961	+				-0.6
3,281,961	+				-1.2
3,281,961	+				-0.6
3,281,961	+				+1.3
3,281,961	+				+0.9
3,281,961	+				-0.3
3,281,961	+				-0.3
3,281,969	+				-1.9
3,281,969	-				+0.6
3,281,969	-				-1.0
3,281,969	-				-3.0
3,281,971	+				+0.8
3,281,971	+				-0.3
3,281,979	-				+0.5
3,281,986	-				-0.0
3,282,031	-				+0.7
3,282,031	-				-1.3
3,282,036	+				-3.3
3,282,036	+				-2.2
3,282,036	+				+0.2
3,282,041	+				+1.5
3,282,044	-				+0.6
3,282,046	+				+1.2
3,282,049	-				-1.9
3,282,054	-				-2.1
3,282,094	-				-0.6
3,282,125	+				+3.0
3,282,148	+				+1.6
3,282,156	-				+1.3
3,282,217	+				-0.4
3,282,225	-		PGA1_c31410	0.10	+0.8
3,282,225	-		PGA1_c31410	0.10	+1.1
3,282,225	-		PGA1_c31410	0.10	+0.9
3,282,225	-		PGA1_c31410	0.10	+1.3
3,282,236	-		PGA1_c31410	0.11	+1.5
3,282,249	+		PGA1_c31410	0.12	-0.6
3,282,285	+		PGA1_c31410	0.15	+2.2
3,282,285	+		PGA1_c31410	0.15	+0.5
3,282,290	-		PGA1_c31410	0.16	+1.8
3,282,293	-		PGA1_c31410	0.16	+0.4
3,282,334	+		PGA1_c31410	0.19	+0.4
3,282,334	+		PGA1_c31410	0.19	+1.0
3,282,334	+		PGA1_c31410	0.19	+1.3
3,282,334	+		PGA1_c31410	0.19	-1.7
3,282,334	+		PGA1_c31410	0.19	-1.1
3,282,334	+		PGA1_c31410	0.19	+0.6
3,282,334	+		PGA1_c31410	0.19	+0.1
3,282,342	-		PGA1_c31410	0.20	-0.1
3,282,342	-		PGA1_c31410	0.20	+1.3
3,282,378	-		PGA1_c31410	0.23	+1.2
3,282,379	-		PGA1_c31410	0.23	+2.1
3,282,379	-		PGA1_c31410	0.23	-3.0
3,282,409	+		PGA1_c31410	0.26	+1.6
3,282,422	-		PGA1_c31410	0.27	-0.7
3,282,422	-		PGA1_c31410	0.27	+1.2
3,282,422	-		PGA1_c31410	0.27	+0.0
3,282,430	+		PGA1_c31410	0.28	+1.4
3,282,484	-		PGA1_c31410	0.32	+1.8
3,282,546	+		PGA1_c31410	0.37	+0.9
3,282,546	+		PGA1_c31410	0.37	+0.7
3,282,546	+		PGA1_c31410	0.37	+0.4
3,282,551	-		PGA1_c31410	0.38	+1.1
3,282,562	+		PGA1_c31410	0.39	+1.2
3,282,616	+		PGA1_c31410	0.43	+2.0
3,282,616	+		PGA1_c31410	0.43	+1.1
3,282,624	-		PGA1_c31410	0.44	+1.1
3,282,624	-		PGA1_c31410	0.44	-0.5
3,282,624	-		PGA1_c31410	0.44	+0.9
3,282,624	-		PGA1_c31410	0.44	+1.0
3,282,707	+		PGA1_c31410	0.51	+1.3
3,282,798	-		PGA1_c31410	0.59	+1.0
3,282,811	+		PGA1_c31410	0.60	+0.2
3,282,844	-		PGA1_c31410	0.62	+2.0
3,282,844	-		PGA1_c31410	0.62	-1.7
3,282,888	+		PGA1_c31410	0.66	+1.2
3,282,907	+		PGA1_c31410	0.68	-0.1
3,282,939	+		PGA1_c31410	0.70	+2.0
3,282,939	+		PGA1_c31410	0.70	-1.2
3,282,947	-		PGA1_c31410	0.71	+1.8
3,282,952	-		PGA1_c31410	0.72	-0.2
3,282,995	+		PGA1_c31410	0.75	+0.5
3,283,085	-		PGA1_c31410	0.83	+1.8
3,283,115	+		PGA1_c31410	0.85	+0.3
3,283,130	+		PGA1_c31410	0.87	-1.3
3,283,131	+		PGA1_c31410	0.87	-0.7
3,283,138	-		PGA1_c31410	0.87	+0.8
3,283,139	-		PGA1_c31410	0.87	+0.1
3,283,235	+				+0.3
3,283,304	-				+0.1
3,283,305	+				+1.6
3,283,313	-				+0.9
3,283,313	-				+0.1
3,283,313	-				+1.6
3,283,328	-				-1.1
3,283,328	-				+1.1
3,283,348	-				-0.2
3,283,356	+				-0.7
3,283,405	+				-0.0
3,283,413	-				-0.2
3,283,413	-				+0.8
3,283,421	+				-0.6
3,283,421	+				+0.6
3,283,421	+				+1.1
3,283,421	+				-1.1
3,283,429	-				+1.5
3,283,429	-				-2.9
3,283,429	-				-0.4
3,283,439	-				+1.0
3,283,467	-				+0.9
3,283,477	+				+0.5
3,283,482	+				+1.3
3,283,497	+		PGA1_c31420	0.11	+0.9
3,283,497	+		PGA1_c31420	0.11	+0.5
3,283,497	+		PGA1_c31420	0.11	+0.2
3,283,505	-		PGA1_c31420	0.12	+0.2
3,283,570	+		PGA1_c31420	0.21	+1.3
3,283,570	+		PGA1_c31420	0.21	+0.7
3,283,578	-		PGA1_c31420	0.22	+1.1
3,283,579	-		PGA1_c31420	0.22	+0.6
3,283,604	+		PGA1_c31420	0.25	+0.2
3,283,726	+		PGA1_c31420	0.41	+0.1
3,283,726	+		PGA1_c31420	0.41	+0.7
3,283,729	-		PGA1_c31420	0.41	-0.7
3,283,729	-		PGA1_c31420	0.41	+0.1
3,283,729	-		PGA1_c31420	0.41	+0.9
3,283,734	-		PGA1_c31420	0.42	-0.3
3,283,737	+		PGA1_c31420	0.42	-0.5
3,283,763	-		PGA1_c31420	0.46	+0.4
3,283,829	+		PGA1_c31420	0.54	-1.0
3,283,829	-		PGA1_c31420	0.54	+0.1
3,283,830	+		PGA1_c31420	0.54	-0.2
3,283,845	+		PGA1_c31420	0.56	-0.2
3,283,845	+		PGA1_c31420	0.56	-0.9
3,283,845	+		PGA1_c31420	0.56	+2.3
3,283,853	-		PGA1_c31420	0.57	-1.1
3,283,853	-		PGA1_c31420	0.57	+1.0
3,283,855	+		PGA1_c31420	0.57	+0.7
3,283,920	-		PGA1_c31420	0.66	+2.1
3,283,920	-		PGA1_c31420	0.66	-0.4
3,283,955	-		PGA1_c31420	0.70	+1.3
3,283,965	-		PGA1_c31420	0.72	+1.0
3,283,968	+		PGA1_c31420	0.72	+0.6
3,283,976	-		PGA1_c31420	0.73	+0.9
3,284,002	-		PGA1_c31420	0.76	+2.0
3,284,020	-		PGA1_c31420	0.79	+0.3
3,284,039	-		PGA1_c31420	0.81	+0.9
3,284,082	-		PGA1_c31420	0.87	+2.6
3,284,148	-				+0.6
3,284,157	+				+1.6
3,284,168	+				+0.5
3,284,179	+				-1.1
3,284,179	+				+0.1
3,284,187	-				-2.9
3,284,189	+				+0.9
3,284,195	+				+1.5
3,284,197	-				-0.1
3,284,197	-				+0.7
3,284,220	-				-1.1
3,284,257	+		PGA1_c31430	0.11	+0.2
3,284,263	-		PGA1_c31430	0.11	+0.8