Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31060

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
3,244,750	-		PGA1_c31050	0.73	+1.3
3,244,750	-		PGA1_c31050	0.73	+1.4
3,244,761	+		PGA1_c31050	0.73	-0.4
3,244,766	+		PGA1_c31050	0.73	+0.4
3,244,766	+		PGA1_c31050	0.73	+0.5
3,244,766	+		PGA1_c31050	0.73	+0.4
3,244,766	+		PGA1_c31050	0.73	-2.7
3,244,774	-		PGA1_c31050	0.73	+0.2
3,244,774	-		PGA1_c31050	0.73	-2.2
3,244,774	-		PGA1_c31050	0.73	-0.5
3,244,796	-		PGA1_c31050	0.74	+0.5
3,244,816	+		PGA1_c31050	0.75	+0.7
3,244,824	-		PGA1_c31050	0.75	+0.7
3,244,829	+		PGA1_c31050	0.75	-0.1
3,244,839	+		PGA1_c31050	0.75	+1.0
3,244,840	+		PGA1_c31050	0.75	+0.4
3,244,917	+		PGA1_c31050	0.78	-0.5
3,244,927	-		PGA1_c31050	0.78	+0.3
3,244,947	+		PGA1_c31050	0.79	-0.5
3,244,960	-		PGA1_c31050	0.79	-0.9
3,244,965	-		PGA1_c31050	0.79	+1.1
3,244,974	-		PGA1_c31050	0.79	-3.0
3,245,030	+		PGA1_c31050	0.81	+0.7
3,245,031	-		PGA1_c31050	0.81	-0.9
3,245,078	-		PGA1_c31050	0.82	-1.0
3,245,078	-		PGA1_c31050	0.82	+0.4
3,245,165	+		PGA1_c31050	0.85	-2.5
3,245,165	+		PGA1_c31050	0.85	-2.6
3,245,165	+		PGA1_c31050	0.85	-0.1
3,245,165	+		PGA1_c31050	0.85	+1.0
3,245,172	+		PGA1_c31050	0.85	-0.2
3,245,172	+		PGA1_c31050	0.85	+0.6
3,245,172	+		PGA1_c31050	0.85	+0.0
3,245,172	+		PGA1_c31050	0.85	+1.1
3,245,172	+		PGA1_c31050	0.85	-0.3
3,245,172	+		PGA1_c31050	0.85	+0.0
3,245,172	+		PGA1_c31050	0.85	-0.4
3,245,172	+		PGA1_c31050	0.85	-0.4
3,245,173	-		PGA1_c31050	0.85	-0.1
3,245,173	-		PGA1_c31050	0.85	+0.0
3,245,177	+		PGA1_c31050	0.85	+2.9
3,245,177	+		PGA1_c31050	0.85	-0.0
3,245,177	+		PGA1_c31050	0.85	-0.1
3,245,180	+		PGA1_c31050	0.85	+1.9
3,245,180	-		PGA1_c31050	0.85	+0.3
3,245,180	-		PGA1_c31050	0.85	+0.1
3,245,185	+		PGA1_c31050	0.85	+0.9
3,245,185	+		PGA1_c31050	0.85	-0.6
3,245,185	+		PGA1_c31050	0.85	-1.0
3,245,185	-		PGA1_c31050	0.85	+1.0
3,245,188	-		PGA1_c31050	0.86	-1.0
3,245,237	+		PGA1_c31050	0.87	-0.4
3,245,243	+		PGA1_c31050	0.87	-0.8
3,245,252	+		PGA1_c31050	0.87	-0.5
3,245,252	+		PGA1_c31050	0.87	+0.8
3,245,252	+		PGA1_c31050	0.87	-2.6
3,245,252	+		PGA1_c31050	0.87	-0.9
3,245,252	+		PGA1_c31050	0.87	-2.2
3,245,252	+		PGA1_c31050	0.87	-0.3
3,245,253	-		PGA1_c31050	0.87	+0.3
3,245,253	-		PGA1_c31050	0.87	+0.3
3,245,260	-		PGA1_c31050	0.88	-0.8
3,245,260	-		PGA1_c31050	0.88	-0.4
3,245,260	-		PGA1_c31050	0.88	-1.3
3,245,260	-		PGA1_c31050	0.88	-1.2
3,245,260	-		PGA1_c31050	0.88	+0.0
3,245,306	+		PGA1_c31050	0.89	-0.2
3,245,306	+		PGA1_c31050	0.89	+2.7
3,245,306	+		PGA1_c31050	0.89	+1.2
3,245,306	+		PGA1_c31050	0.89	+2.1
3,245,306	+		PGA1_c31050	0.89	+0.1
3,245,306	+		PGA1_c31050	0.89	-2.5
3,245,314	-		PGA1_c31050	0.89	+0.7
3,245,314	-		PGA1_c31050	0.89	+0.2
3,245,314	-		PGA1_c31050	0.89	-0.9
3,245,314	-		PGA1_c31050	0.89	-1.9
3,245,314	-		PGA1_c31050	0.89	-0.1
3,245,314	-		PGA1_c31050	0.89	-0.5
3,245,314	-		PGA1_c31050	0.89	+1.7
3,245,314	-		PGA1_c31050	0.89	-1.7
3,245,316	+		PGA1_c31050	0.89	-0.8
3,245,316	-		PGA1_c31050	0.89	-0.3
3,245,326	-		PGA1_c31050	0.90	+1.4
3,245,351	+				-2.2
3,245,352	-				-0.3
3,245,353	+				-1.6
3,245,353	+				-0.5
3,245,361	-				+0.6
3,245,380	+				+0.3
3,245,380	-				+0.4
3,245,380	-				+0.2
3,245,427	+				-0.1
3,245,429	+				+0.2
3,245,430	-				-1.1
3,245,436	+				+0.9
3,245,437	-				+0.2
3,245,472	+				+1.0
3,245,484	+				+0.1
3,245,545	-				-0.5
3,245,553	-				-2.5
3,245,563	+				+0.7
3,245,580	-				-0.4
3,245,660	+				-0.4
3,245,702	+				-0.3
3,245,708	+				+0.2
3,245,716	-				-0.3
3,245,740	+				-0.4
3,245,763	+				+1.4
3,245,783	+				+0.8
3,245,832	+				-0.1
3,245,832	+				+1.7
3,245,832	+				-0.1
3,245,832	+				+0.1
3,245,832	+				-0.8
3,245,832	+				-0.6
3,245,832	+				-2.4
3,245,832	+				-0.4
3,245,832	+				+1.0
3,245,832	+				+0.1
3,245,832	+				-0.6
3,245,832	+				+0.4
3,245,833	+				+0.0
3,245,840	-		PGA1_c31060	0.11	-0.2
3,245,840	-		PGA1_c31060	0.11	+1.1
3,245,840	-		PGA1_c31060	0.11	+1.0
3,245,840	-		PGA1_c31060	0.11	-0.2
3,245,840	-		PGA1_c31060	0.11	-0.5
3,245,840	-		PGA1_c31060	0.11	+2.3
3,245,840	-		PGA1_c31060	0.11	+0.3
3,245,840	-		PGA1_c31060	0.11	+1.0
3,245,840	-		PGA1_c31060	0.11	-0.5
3,245,840	-		PGA1_c31060	0.11	+1.0
3,245,840	-		PGA1_c31060	0.11	-0.2
3,245,840	-		PGA1_c31060	0.11	-1.7
3,245,840	-		PGA1_c31060	0.11	+1.0
3,245,842	+		PGA1_c31060	0.11	-0.1
3,245,848	-		PGA1_c31060	0.11	-2.0
3,245,850	-		PGA1_c31060	0.12	+0.8
3,245,850	-		PGA1_c31060	0.12	-0.5
3,245,850	-		PGA1_c31060	0.12	-1.0
3,245,850	-		PGA1_c31060	0.12	+0.4
3,245,850	-		PGA1_c31060	0.12	-0.7
3,245,914	-		PGA1_c31060	0.19	-1.6
3,245,980	+		PGA1_c31060	0.27	-0.1
3,245,999	+		PGA1_c31060	0.29	-0.3
3,246,049	+		PGA1_c31060	0.35	+1.1
3,246,052	-		PGA1_c31060	0.35	+2.2
3,246,071	-		PGA1_c31060	0.38	+0.1
3,246,073	+		PGA1_c31060	0.38	-0.4
3,246,155	+		PGA1_c31060	0.47	+1.0
3,246,158	-		PGA1_c31060	0.48	+0.9
3,246,158	-		PGA1_c31060	0.48	-0.2
3,246,221	-		PGA1_c31060	0.55	-1.4
3,246,274	+		PGA1_c31060	0.61	-0.9
3,246,289	-		PGA1_c31060	0.63	+0.4
3,246,329	+		PGA1_c31060	0.68	-0.7
3,246,329	+		PGA1_c31060	0.68	+0.3
3,246,329	+		PGA1_c31060	0.68	+0.9
3,246,374	-		PGA1_c31060	0.73	-0.1
3,246,379	+		PGA1_c31060	0.74	+0.5
3,246,379	+		PGA1_c31060	0.74	+0.3
3,246,379	+		PGA1_c31060	0.74	+1.7
3,246,379	+		PGA1_c31060	0.74	-0.8
3,246,379	+		PGA1_c31060	0.74	+0.9
3,246,379	+		PGA1_c31060	0.74	-0.2
3,246,379	+		PGA1_c31060	0.74	-0.7
3,246,387	-		PGA1_c31060	0.75	+1.1
3,246,387	-		PGA1_c31060	0.75	+0.3
3,246,387	-		PGA1_c31060	0.75	+1.2
3,246,387	-		PGA1_c31060	0.75	+0.0
3,246,387	-		PGA1_c31060	0.75	+1.3
3,246,387	-		PGA1_c31060	0.75	-0.1
3,246,392	-		PGA1_c31060	0.75	-0.2
3,246,407	+		PGA1_c31060	0.77	-0.1
3,246,412	-		PGA1_c31060	0.77	+1.3
3,246,420	-		PGA1_c31060	0.78	-0.2
3,246,420	-		PGA1_c31060	0.78	-0.7
3,246,420	-		PGA1_c31060	0.78	+0.6
3,246,433	+		PGA1_c31060	0.80	-0.4
3,246,442	+		PGA1_c31060	0.81	+0.0
3,246,452	-		PGA1_c31060	0.82	+1.1
3,246,453	-		PGA1_c31060	0.82	+0.7
3,246,456	+		PGA1_c31060	0.83	+0.0
3,246,463	+		PGA1_c31060	0.83	+1.4
3,246,463	+		PGA1_c31060	0.83	+1.2
3,246,471	-		PGA1_c31060	0.84	+1.1
3,246,471	-		PGA1_c31060	0.84	-0.2
3,246,471	-		PGA1_c31060	0.84	-0.8
3,246,471	-		PGA1_c31060	0.84	-0.1
3,246,489	-		PGA1_c31060	0.86	-0.3
3,246,619	-				+1.0
3,246,668	-				+0.6
3,246,677	+				+0.9
3,246,689	+				-0.1
3,246,694	+				-2.1
3,246,722	+				+2.0
3,246,807	-		PGA1_c31070	0.15	+1.1
3,246,846	-		PGA1_c31070	0.18	+0.1
3,246,860	+		PGA1_c31070	0.19	-2.7
3,246,868	-		PGA1_c31070	0.19	+0.7
3,246,868	-		PGA1_c31070	0.19	+0.1
3,246,899	-		PGA1_c31070	0.21	-0.8
3,246,900	-		PGA1_c31070	0.21	-1.5
3,246,903	+		PGA1_c31070	0.22	-0.1
3,246,931	-		PGA1_c31070	0.24	+0.3
3,246,936	-		PGA1_c31070	0.24	+0.3
3,246,957	+		PGA1_c31070	0.26	-1.8
3,246,960	-		PGA1_c31070	0.26	-0.3
3,246,965	-		PGA1_c31070	0.26	-0.1
3,246,965	-		PGA1_c31070	0.26	-0.2
3,246,965	-		PGA1_c31070	0.26	+1.5
3,246,970	+		PGA1_c31070	0.26	+0.7
3,246,970	+		PGA1_c31070	0.26	-0.9
3,246,970	+		PGA1_c31070	0.26	+0.2
3,246,970	+		PGA1_c31070	0.26	+0.7
3,246,970	+		PGA1_c31070	0.26	-1.1
3,246,972	+		PGA1_c31070	0.27	+0.0
3,246,972	+		PGA1_c31070	0.27	+2.1
3,246,972	+		PGA1_c31070	0.27	+0.3
3,246,988	+		PGA1_c31070	0.28	+1.4
3,246,988	+		PGA1_c31070	0.28	+0.0
3,247,030	+		PGA1_c31070	0.31	+0.2
3,247,038	-		PGA1_c31070	0.31	-0.8
3,247,043	-		PGA1_c31070	0.32	-0.5
3,247,072	-		PGA1_c31070	0.34	+0.8
3,247,082	-		PGA1_c31070	0.34	-0.9
3,247,108	+		PGA1_c31070	0.36	+0.3
3,247,250	+		PGA1_c31070	0.47	+0.6
3,247,256	+		PGA1_c31070	0.47	+0.0
3,247,256	+		PGA1_c31070	0.47	+1.5
3,247,256	+		PGA1_c31070	0.47	-0.3
3,247,256	+		PGA1_c31070	0.47	-2.9
3,247,256	+		PGA1_c31070	0.47	-0.3
3,247,256	+		PGA1_c31070	0.47	+0.7
3,247,256	+		PGA1_c31070	0.47	-2.3
3,247,256	+		PGA1_c31070	0.47	+0.8
3,247,264	-		PGA1_c31070	0.48	-0.8
3,247,264	-		PGA1_c31070	0.48	+1.3
3,247,264	-		PGA1_c31070	0.48	-4.0
3,247,264	-		PGA1_c31070	0.48	-1.5
3,247,306	-		PGA1_c31070	0.51	+0.7
3,247,399	+		PGA1_c31070	0.57	-0.9
3,247,400	+		PGA1_c31070	0.57	-1.5
3,247,413	-		PGA1_c31070	0.58	-0.1
3,247,422	+		PGA1_c31070	0.59	-0.5
3,247,430	-		PGA1_c31070	0.59	-1.0
3,247,463	+		PGA1_c31070	0.62	+0.3
3,247,471	-		PGA1_c31070	0.62	-0.2
3,247,497	-		PGA1_c31070	0.64	-0.7
3,247,499	-		PGA1_c31070	0.64	-0.4
3,247,505	-		PGA1_c31070	0.65	+0.3
3,247,538	-		PGA1_c31070	0.67	-0.1
3,247,580	-		PGA1_c31070	0.70	-1.6