Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3081

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
3,260,544	+				+0.9
3,260,574	+				+1.4
3,260,574	+				-0.6
3,260,574	+				-1.4
3,260,656	-				-2.2
3,260,781	+		Psest_3080	0.22	+0.7
3,261,028	-		Psest_3080	0.55	-0.4
3,261,052	-		Psest_3080	0.58	+0.8
3,261,511	+				+1.8
3,261,511	+				+1.2
3,261,511	+				-0.5
3,261,511	+				-0.8
3,261,511	+				-1.0
3,261,511	+				-0.0
3,261,511	+				-0.9
3,261,511	+				-0.6
3,261,511	+				-1.4
3,261,511	+				-1.3
3,261,511	+				+0.1
3,261,511	+				-0.3
3,261,512	-				-0.8
3,261,512	-				+1.6
3,261,512	-				-0.8
3,261,512	-				+1.6
3,261,512	-				-2.0
3,261,512	-				+0.7
3,261,512	-				+2.0
3,261,512	-				-0.7
3,261,512	-				+0.7
3,261,512	-				+1.2
3,261,512	-				+1.4
3,261,512	-				+3.6
3,261,512	-				+3.3
3,261,512	-				+1.7
3,261,522	+				+0.1
3,261,523	-				+1.7
3,261,523	-				-0.2
3,261,523	-				+0.6
3,261,603	-				-1.8
3,261,634	+				+0.1
3,261,634	+				+1.7
3,261,635	-				-0.9
3,261,635	-				+0.4
3,261,635	-				+1.5
3,261,635	-				+3.0
3,261,635	-				-1.2
3,261,635	-				+1.0
3,261,635	-				-0.9
3,261,635	-				+0.2
3,261,635	-				+0.6
3,261,787	-		Psest_3081	0.10	-1.0
3,262,048	+		Psest_3081	0.21	-1.1
3,262,048	+		Psest_3081	0.21	-2.2
3,262,049	-		Psest_3081	0.21	+1.0
3,262,069	+		Psest_3081	0.22	-0.2
3,262,069	+		Psest_3081	0.22	+1.1
3,262,070	-		Psest_3081	0.22	+0.0
3,262,070	-		Psest_3081	0.22	+1.2
3,262,477	+		Psest_3081	0.39	-0.4
3,262,496	-		Psest_3081	0.40	-0.9
3,262,748	-		Psest_3081	0.51	+0.9
3,262,807	+		Psest_3081	0.53	+1.0
3,262,807	+		Psest_3081	0.53	+1.3
3,262,807	+		Psest_3081	0.53	-1.0
3,262,807	+		Psest_3081	0.53	+0.5
3,262,807	+		Psest_3081	0.53	+2.0
3,262,808	-		Psest_3081	0.53	-0.1
3,262,808	-		Psest_3081	0.53	+1.4
3,262,808	-		Psest_3081	0.53	-0.6
3,262,808	-		Psest_3081	0.53	+1.0
3,262,909	+		Psest_3081	0.57	-1.3
3,262,981	+		Psest_3081	0.60	+1.6
3,262,981	+		Psest_3081	0.60	+0.0
3,263,095	+		Psest_3081	0.65	+0.6
3,263,096	-		Psest_3081	0.65	+0.4
3,263,096	-		Psest_3081	0.65	+1.6
3,263,221	+		Psest_3081	0.70	-1.0
3,263,221	+		Psest_3081	0.70	+0.0
3,263,222	-		Psest_3081	0.70	+0.4
3,263,347	+		Psest_3081	0.76	+0.6
3,263,466	+		Psest_3081	0.81	+0.8
3,263,536	+		Psest_3081	0.84	+0.9
3,263,542	+		Psest_3081	0.84	+0.6
3,263,542	+		Psest_3081	0.84	+1.4
3,263,543	-		Psest_3081	0.84	+2.5
3,263,543	-		Psest_3081	0.84	+1.5
3,263,543	-		Psest_3081	0.84	+1.0
3,263,543	-		Psest_3081	0.84	-0.9
3,263,543	-		Psest_3081	0.84	+1.3
3,263,942	+				-1.3
3,263,942	+				+0.9
3,263,943	-				+1.9
3,263,943	-				-1.2
3,263,943	-				+0.1
3,263,943	-				+0.4
3,263,943	-				+0.1
3,264,038	+				-0.8
3,264,154	+		Psest_3082	0.20	+0.6
3,264,155	-		Psest_3082	0.20	+0.0
3,264,155	-		Psest_3082	0.20	-1.2
3,264,308	+		Psest_3082	0.58	+0.1
3,264,308	+		Psest_3082	0.58	-0.6
3,264,308	+		Psest_3082	0.58	-1.4
3,264,309	-		Psest_3082	0.58	+0.9
3,264,309	-		Psest_3082	0.58	-0.6
3,264,309	-		Psest_3082	0.58	+0.6
3,264,309	-		Psest_3082	0.58	-0.8
3,264,309	-		Psest_3082	0.58	+0.1
3,264,309	-		Psest_3082	0.58	-0.9
3,264,309	-		Psest_3082	0.58	+0.1
3,264,309	-		Psest_3082	0.58	-0.2
3,264,309	-		Psest_3082	0.58	-0.9
3,264,407	+		Psest_3082	0.83	-2.4
3,264,474	-				+0.4
3,264,474	-				-0.2
3,264,474	-				-0.5
3,264,523	-				-1.0
3,264,532	-				+3.6
3,264,545	-				+0.0
3,264,545	-				+0.4
3,264,670	+		Psest_3083	0.19	-0.5
3,264,670	+		Psest_3083	0.19	+0.5
3,264,670	+		Psest_3083	0.19	-1.4
3,264,671	-		Psest_3083	0.19	-1.7
3,264,833	-		Psest_3083	0.48	-0.3
3,264,898	+		Psest_3083	0.59	-0.3
3,264,898	+		Psest_3083	0.59	-0.3
3,264,898	+		Psest_3083	0.59	-0.3
3,264,899	-		Psest_3083	0.59	+0.0
3,264,899	-		Psest_3083	0.59	+0.4
3,264,899	-		Psest_3083	0.59	-0.4
3,264,899	-		Psest_3083	0.59	-0.3
3,264,900	+		Psest_3083	0.59	+0.2
3,264,901	-		Psest_3083	0.59	-0.3