Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29540

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
3,087,696	-		PGA1_c29520	0.87	-1.7
3,087,788	+				+0.2
3,087,788	+				-0.1
3,087,866	+				-0.0
3,087,874	-				+0.4
3,087,897	+				-1.0
3,087,905	-				-0.5
3,087,905	-				+0.0
3,087,910	-				-0.2
3,087,910	-				-0.2
3,087,910	-				-1.4
3,087,933	+				+0.1
3,087,933	+				+0.2
3,087,936	-				+1.4
3,087,941	-				-0.3
3,087,941	-				+1.0
3,087,941	-				+0.1
3,087,941	-				-0.9
3,088,081	+		PGA1_c29530	0.18	-1.5
3,088,101	+		PGA1_c29530	0.21	-1.5
3,088,116	+		PGA1_c29530	0.24	+0.2
3,088,116	+		PGA1_c29530	0.24	+0.0
3,088,116	+		PGA1_c29530	0.24	+0.1
3,088,124	-		PGA1_c29530	0.25	-1.1
3,088,124	-		PGA1_c29530	0.25	-0.1
3,088,167	+		PGA1_c29530	0.31	-4.0
3,088,167	+		PGA1_c29530	0.31	-2.0
3,088,175	-		PGA1_c29530	0.33	-1.7
3,088,175	-		PGA1_c29530	0.33	+0.0
3,088,261	-		PGA1_c29530	0.46	-2.1
3,088,266	-		PGA1_c29530	0.47	+0.4
3,088,310	+		PGA1_c29530	0.54	+1.0
3,088,315	+		PGA1_c29530	0.54	-2.7
3,088,315	+		PGA1_c29530	0.54	+0.6
3,088,350	+		PGA1_c29530	0.60	-2.1
3,088,352	-		PGA1_c29530	0.60	-1.3
3,088,439	-		PGA1_c29530	0.73	-0.2
3,088,450	+		PGA1_c29530	0.75	+0.8
3,088,452	+		PGA1_c29530	0.75	-0.7
3,088,458	-		PGA1_c29530	0.76	-2.5
3,088,468	-		PGA1_c29530	0.78	+0.5
3,088,502	+		PGA1_c29530	0.83	-0.2
3,088,502	+		PGA1_c29530	0.83	-3.5
3,088,507	+		PGA1_c29530	0.84	+0.5
3,088,510	-		PGA1_c29530	0.84	+0.2
3,088,510	-		PGA1_c29530	0.84	+1.4
3,088,510	-		PGA1_c29530	0.84	+0.2
3,088,510	-		PGA1_c29530	0.84	-2.4
3,088,515	-		PGA1_c29530	0.85	-2.0
3,088,515	-		PGA1_c29530	0.85	+1.0
3,088,525	+		PGA1_c29530	0.87	-2.7
3,088,543	+		PGA1_c29530	0.90	-3.0
3,088,569	-				-3.0
3,088,613	-				+1.6
3,088,643	-				-0.4
3,088,643	-				+0.1
3,088,650	-		PGA1_c29540	0.12	-0.1
3,088,671	+		PGA1_c29540	0.19	-2.1
3,088,679	-		PGA1_c29540	0.22	-2.0
3,088,699	+		PGA1_c29540	0.30	+1.3
3,088,709	+		PGA1_c29540	0.34	-1.4
3,088,713	+		PGA1_c29540	0.35	-0.2
3,088,762	-		PGA1_c29540	0.54	-0.9
3,088,931	+				+0.8
3,088,981	-				-1.4
3,089,031	-		PGA1_c29550	0.11	+0.3
3,089,040	+		PGA1_c29550	0.11	-2.2
3,089,045	+		PGA1_c29550	0.12	+1.2
3,089,045	+		PGA1_c29550	0.12	+0.1
3,089,045	+		PGA1_c29550	0.12	+1.2
3,089,053	-		PGA1_c29550	0.12	-0.0
3,089,053	-		PGA1_c29550	0.12	+0.0
3,089,136	+		PGA1_c29550	0.18	+0.5
3,089,144	-		PGA1_c29550	0.19	+1.0
3,089,144	-		PGA1_c29550	0.19	+1.0
3,089,191	-		PGA1_c29550	0.22	-0.1
3,089,192	+		PGA1_c29550	0.22	-0.9
3,089,192	+		PGA1_c29550	0.22	+0.4
3,089,291	+		PGA1_c29550	0.29	+1.8
3,089,307	+		PGA1_c29550	0.30	-1.2
3,089,316	-		PGA1_c29550	0.31	+0.5
3,089,372	+		PGA1_c29550	0.35	-1.1
3,089,409	+		PGA1_c29550	0.38	-0.2
3,089,417	-		PGA1_c29550	0.38	+0.7
3,089,486	+		PGA1_c29550	0.43	-0.4
3,089,490	+		PGA1_c29550	0.44	-0.6
3,089,498	-		PGA1_c29550	0.44	-1.5
3,089,525	+		PGA1_c29550	0.46	+0.8
3,089,530	+		PGA1_c29550	0.47	-0.3
3,089,530	+		PGA1_c29550	0.47	+0.9
3,089,530	+		PGA1_c29550	0.47	-1.1
3,089,538	-		PGA1_c29550	0.47	-0.7
3,089,554	+		PGA1_c29550	0.48	-0.0
3,089,590	+		PGA1_c29550	0.51	-0.2
3,089,590	+		PGA1_c29550	0.51	-2.9
3,089,595	+		PGA1_c29550	0.51	-2.1
3,089,602	+		PGA1_c29550	0.52	+0.2
3,089,603	-		PGA1_c29550	0.52	-1.1
3,089,685	-		PGA1_c29550	0.58	+0.2
3,089,782	-		PGA1_c29550	0.65	-0.3
3,089,782	-		PGA1_c29550	0.65	+0.3
3,089,834	-		PGA1_c29550	0.68	-0.7
3,089,834	-		PGA1_c29550	0.68	-1.2
3,089,846	+		PGA1_c29550	0.69	+1.5
3,089,846	+		PGA1_c29550	0.69	-1.0
3,089,846	+		PGA1_c29550	0.69	-1.1
3,089,846	+		PGA1_c29550	0.69	-0.3
3,089,846	+		PGA1_c29550	0.69	+0.1
3,089,854	-		PGA1_c29550	0.70	+0.4
3,089,854	-		PGA1_c29550	0.70	-1.2
3,089,854	-		PGA1_c29550	0.70	+0.3
3,089,872	-		PGA1_c29550	0.71	-0.6
3,089,872	-		PGA1_c29550	0.71	-0.2
3,089,872	-		PGA1_c29550	0.71	+0.4