Experiment: Cephalothin 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2907 and Psest_2908 overlap by 4 nucleotides Psest_2908 and Psest_2909 overlap by 4 nucleotides Psest_2909 and Psest_2910 are separated by 445 nucleotides
Psest_2907: Psest_2907 - Protein of unknown function (DUF3618)., at 3,099,155 to 3,099,916
_2907
Psest_2908: Psest_2908 - Protein of unknown function (DUF1469)., at 3,099,913 to 3,100,338
_2908
Psest_2909: Psest_2909 - hypothetical protein, at 3,100,335 to 3,101,093
_2909
Psest_2910: Psest_2910 - Endoglucanase, at 3,101,539 to 3,103,617
_2910
Position (kb)
3100
3101
3102 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3099.633 kb on + strand, within Psest_2907 at 3099.634 kb on - strand, within Psest_2907 at 3099.890 kb on + strand at 3099.891 kb on - strand at 3099.891 kb on - strand at 3099.891 kb on - strand at 3099.891 kb on - strand at 3099.897 kb on - strand at 3099.904 kb on + strand at 3099.904 kb on + strand at 3099.905 kb on - strand at 3099.911 kb on - strand at 3099.911 kb on - strand at 3100.095 kb on - strand, within Psest_2908 at 3100.095 kb on - strand, within Psest_2908 at 3100.095 kb on - strand, within Psest_2908 at 3100.107 kb on + strand, within Psest_2908 at 3100.107 kb on + strand, within Psest_2908 at 3100.107 kb on + strand, within Psest_2908 at 3100.107 kb on + strand, within Psest_2908 at 3100.107 kb on + strand, within Psest_2908 at 3100.107 kb on + strand, within Psest_2908 at 3100.107 kb on + strand, within Psest_2908 at 3100.107 kb on + strand, within Psest_2908 at 3100.108 kb on - strand, within Psest_2908 at 3100.108 kb on - strand, within Psest_2908 at 3100.108 kb on - strand, within Psest_2908 at 3100.108 kb on - strand, within Psest_2908 at 3100.108 kb on - strand, within Psest_2908 at 3100.108 kb on - strand, within Psest_2908 at 3100.108 kb on - strand, within Psest_2908 at 3100.108 kb on - strand, within Psest_2908 at 3100.308 kb on - strand at 3100.323 kb on + strand at 3100.323 kb on + strand at 3100.323 kb on + strand at 3100.324 kb on - strand at 3100.324 kb on - strand at 3100.344 kb on + strand at 3100.490 kb on + strand, within Psest_2909 at 3100.565 kb on - strand, within Psest_2909 at 3100.575 kb on - strand, within Psest_2909 at 3100.780 kb on + strand, within Psest_2909 at 3100.976 kb on + strand, within Psest_2909 at 3100.976 kb on + strand, within Psest_2909 at 3100.976 kb on + strand, within Psest_2909 at 3100.976 kb on + strand, within Psest_2909 at 3100.977 kb on - strand, within Psest_2909 at 3100.977 kb on - strand, within Psest_2909 at 3101.108 kb on - strand at 3101.108 kb on - strand at 3101.108 kb on - strand at 3101.109 kb on + strand at 3101.109 kb on + strand at 3101.109 kb on + strand at 3101.110 kb on - strand at 3101.110 kb on - strand at 3101.110 kb on - strand at 3101.110 kb on - strand at 3101.110 kb on - strand at 3101.110 kb on - strand at 3101.117 kb on + strand at 3101.117 kb on + strand at 3101.197 kb on + strand at 3101.197 kb on + strand at 3101.197 kb on + strand at 3101.197 kb on + strand at 3101.304 kb on + strand at 3101.305 kb on - strand at 3101.319 kb on + strand at 3101.541 kb on - strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.565 kb on + strand at 3101.675 kb on + strand at 3101.675 kb on + strand at 3101.675 kb on + strand at 3101.676 kb on - strand at 3101.676 kb on - strand at 3101.705 kb on + strand at 3101.705 kb on + strand at 3101.705 kb on + strand at 3101.706 kb on - strand at 3101.706 kb on - strand at 3101.774 kb on + strand, within Psest_2910 at 3101.774 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.867 kb on + strand, within Psest_2910 at 3101.868 kb on - strand, within Psest_2910 at 3101.868 kb on - strand, within Psest_2910 at 3101.868 kb on - strand, within Psest_2910 at 3101.868 kb on - strand, within Psest_2910 at 3101.868 kb on - strand, within Psest_2910 at 3101.868 kb on - strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.894 kb on + strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.895 kb on - strand, within Psest_2910 at 3101.910 kb on - strand, within Psest_2910 at 3101.910 kb on - strand, within Psest_2910 at 3101.966 kb on + strand, within Psest_2910 at 3101.966 kb on + strand, within Psest_2910 at 3101.966 kb on + strand, within Psest_2910 at 3101.966 kb on + strand, within Psest_2910 at 3101.966 kb on + strand, within Psest_2910 at 3101.966 kb on + strand, within Psest_2910 at 3101.966 kb on + strand, within Psest_2910 at 3101.966 kb on + strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.967 kb on - strand, within Psest_2910 at 3101.969 kb on + strand, within Psest_2910 at 3101.970 kb on - strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.011 kb on + strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910 at 3102.012 kb on - strand, within Psest_2910
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.04 mg/ml remove 3,099,633 + Psest_2907 0.63 +0.5 3,099,634 - Psest_2907 0.63 +1.3 3,099,890 + -1.1 3,099,891 - +0.7 3,099,891 - +0.1 3,099,891 - +0.6 3,099,891 - +1.8 3,099,897 - +0.8 3,099,904 + +0.0 3,099,904 + +0.7 3,099,905 - +0.1 3,099,911 - +0.5 3,099,911 - +0.7 3,100,095 - Psest_2908 0.43 +0.5 3,100,095 - Psest_2908 0.43 -0.3 3,100,095 - Psest_2908 0.43 -0.5 3,100,107 + Psest_2908 0.46 -0.7 3,100,107 + Psest_2908 0.46 -0.5 3,100,107 + Psest_2908 0.46 +0.1 3,100,107 + Psest_2908 0.46 +0.2 3,100,107 + Psest_2908 0.46 -3.1 3,100,107 + Psest_2908 0.46 -1.0 3,100,107 + Psest_2908 0.46 +0.6 3,100,107 + Psest_2908 0.46 -0.4 3,100,108 - Psest_2908 0.46 +0.6 3,100,108 - Psest_2908 0.46 +0.3 3,100,108 - Psest_2908 0.46 +1.4 3,100,108 - Psest_2908 0.46 +2.1 3,100,108 - Psest_2908 0.46 +0.9 3,100,108 - Psest_2908 0.46 +1.2 3,100,108 - Psest_2908 0.46 +1.0 3,100,108 - Psest_2908 0.46 +1.6 3,100,308 - -1.5 3,100,323 + +0.7 3,100,323 + -0.6 3,100,323 + +0.2 3,100,324 - -2.6 3,100,324 - +0.3 3,100,344 + -0.3 3,100,490 + Psest_2909 0.20 +1.1 3,100,565 - Psest_2909 0.30 +0.9 3,100,575 - Psest_2909 0.32 +0.2 3,100,780 + Psest_2909 0.59 +1.3 3,100,976 + Psest_2909 0.84 +0.1 3,100,976 + Psest_2909 0.84 +1.5 3,100,976 + Psest_2909 0.84 +0.2 3,100,976 + Psest_2909 0.84 +1.4 3,100,977 - Psest_2909 0.85 +2.1 3,100,977 - Psest_2909 0.85 +0.6 3,101,108 - +0.6 3,101,108 - -0.8 3,101,108 - +0.8 3,101,109 + -1.1 3,101,109 + +0.5 3,101,109 + +1.5 3,101,110 - -0.8 3,101,110 - +0.2 3,101,110 - -0.3 3,101,110 - +1.5 3,101,110 - +1.5 3,101,110 - +0.1 3,101,117 + -0.1 3,101,117 + -0.6 3,101,197 + +1.7 3,101,197 + +1.5 3,101,197 + +1.2 3,101,197 + +1.5 3,101,304 + -0.3 3,101,305 - +0.7 3,101,319 + +0.7 3,101,541 - +1.3 3,101,565 + +0.0 3,101,565 + +0.3 3,101,565 + -0.7 3,101,565 + -0.1 3,101,565 + +1.2 3,101,565 + -3.1 3,101,565 + -0.3 3,101,565 + -0.3 3,101,565 + -1.3 3,101,565 + -0.8 3,101,565 + -1.0 3,101,565 + +1.2 3,101,565 + -0.7 3,101,565 + +0.9 3,101,565 + -1.9 3,101,565 + -0.8 3,101,565 + +0.1 3,101,675 + -0.6 3,101,675 + +0.6 3,101,675 + -0.3 3,101,676 - +2.0 3,101,676 - +2.6 3,101,705 + -1.9 3,101,705 + -0.3 3,101,705 + +0.3 3,101,706 - +1.4 3,101,706 - +1.4 3,101,774 + Psest_2910 0.11 +2.2 3,101,774 + Psest_2910 0.11 +1.5 3,101,867 + Psest_2910 0.16 +0.1 3,101,867 + Psest_2910 0.16 +1.1 3,101,867 + Psest_2910 0.16 +1.4 3,101,867 + Psest_2910 0.16 +0.3 3,101,867 + Psest_2910 0.16 -2.3 3,101,867 + Psest_2910 0.16 -2.5 3,101,867 + Psest_2910 0.16 -1.0 3,101,867 + Psest_2910 0.16 +0.5 3,101,867 + Psest_2910 0.16 -0.2 3,101,867 + Psest_2910 0.16 -1.4 3,101,867 + Psest_2910 0.16 -0.6 3,101,867 + Psest_2910 0.16 +1.5 3,101,867 + Psest_2910 0.16 +1.8 3,101,868 - Psest_2910 0.16 +1.1 3,101,868 - Psest_2910 0.16 +0.3 3,101,868 - Psest_2910 0.16 +1.2 3,101,868 - Psest_2910 0.16 +1.1 3,101,868 - Psest_2910 0.16 +1.0 3,101,868 - Psest_2910 0.16 +0.0 3,101,894 + Psest_2910 0.17 -0.8 3,101,894 + Psest_2910 0.17 -1.3 3,101,894 + Psest_2910 0.17 +0.2 3,101,894 + Psest_2910 0.17 +0.1 3,101,894 + Psest_2910 0.17 -1.6 3,101,894 + Psest_2910 0.17 +0.6 3,101,894 + Psest_2910 0.17 -2.6 3,101,894 + Psest_2910 0.17 +0.7 3,101,894 + Psest_2910 0.17 +0.5 3,101,894 + Psest_2910 0.17 +1.4 3,101,894 + Psest_2910 0.17 +0.3 3,101,894 + Psest_2910 0.17 -2.4 3,101,894 + Psest_2910 0.17 -0.4 3,101,894 + Psest_2910 0.17 -1.5 3,101,894 + Psest_2910 0.17 -0.7 3,101,894 + Psest_2910 0.17 -0.3 3,101,894 + Psest_2910 0.17 +0.4 3,101,894 + Psest_2910 0.17 +2.4 3,101,894 + Psest_2910 0.17 -0.7 3,101,894 + Psest_2910 0.17 -0.6 3,101,894 + Psest_2910 0.17 -0.1 3,101,894 + Psest_2910 0.17 +0.2 3,101,894 + Psest_2910 0.17 +0.7 3,101,895 - Psest_2910 0.17 +1.1 3,101,895 - Psest_2910 0.17 +1.4 3,101,895 - Psest_2910 0.17 +1.7 3,101,895 - Psest_2910 0.17 +1.9 3,101,895 - Psest_2910 0.17 -0.7 3,101,895 - Psest_2910 0.17 +0.8 3,101,895 - Psest_2910 0.17 +0.7 3,101,895 - Psest_2910 0.17 +0.9 3,101,895 - Psest_2910 0.17 +0.7 3,101,895 - Psest_2910 0.17 +2.4 3,101,895 - Psest_2910 0.17 +0.1 3,101,895 - Psest_2910 0.17 +1.2 3,101,895 - Psest_2910 0.17 +0.4 3,101,895 - Psest_2910 0.17 +0.1 3,101,895 - Psest_2910 0.17 +1.1 3,101,895 - Psest_2910 0.17 +2.1 3,101,895 - Psest_2910 0.17 +1.1 3,101,895 - Psest_2910 0.17 +0.4 3,101,895 - Psest_2910 0.17 +1.8 3,101,895 - Psest_2910 0.17 +1.3 3,101,895 - Psest_2910 0.17 +1.3 3,101,895 - Psest_2910 0.17 -0.7 3,101,895 - Psest_2910 0.17 +1.2 3,101,895 - Psest_2910 0.17 -0.8 3,101,895 - Psest_2910 0.17 -0.0 3,101,895 - Psest_2910 0.17 +0.9 3,101,895 - Psest_2910 0.17 +1.5 3,101,895 - Psest_2910 0.17 +0.4 3,101,895 - Psest_2910 0.17 +1.2 3,101,895 - Psest_2910 0.17 +1.9 3,101,895 - Psest_2910 0.17 +1.4 3,101,895 - Psest_2910 0.17 +1.5 3,101,895 - Psest_2910 0.17 +1.1 3,101,895 - Psest_2910 0.17 -1.5 3,101,895 - Psest_2910 0.17 +0.8 3,101,910 - Psest_2910 0.18 +0.9 3,101,910 - Psest_2910 0.18 -0.4 3,101,966 + Psest_2910 0.21 -1.1 3,101,966 + Psest_2910 0.21 +0.5 3,101,966 + Psest_2910 0.21 -0.7 3,101,966 + Psest_2910 0.21 +0.5 3,101,966 + Psest_2910 0.21 -1.0 3,101,966 + Psest_2910 0.21 -0.7 3,101,966 + Psest_2910 0.21 +0.2 3,101,966 + Psest_2910 0.21 +0.4 3,101,967 - Psest_2910 0.21 +0.1 3,101,967 - Psest_2910 0.21 +1.5 3,101,967 - Psest_2910 0.21 +1.8 3,101,967 - Psest_2910 0.21 +0.3 3,101,967 - Psest_2910 0.21 +0.8 3,101,967 - Psest_2910 0.21 +0.6 3,101,967 - Psest_2910 0.21 +1.8 3,101,967 - Psest_2910 0.21 -0.3 3,101,967 - Psest_2910 0.21 +1.4 3,101,967 - Psest_2910 0.21 +1.2 3,101,969 + Psest_2910 0.21 +2.4 3,101,970 - Psest_2910 0.21 -0.4 3,102,011 + Psest_2910 0.23 -0.3 3,102,011 + Psest_2910 0.23 -0.9 3,102,011 + Psest_2910 0.23 +2.1 3,102,011 + Psest_2910 0.23 +0.2 3,102,011 + Psest_2910 0.23 -0.3 3,102,011 + Psest_2910 0.23 -0.9 3,102,011 + Psest_2910 0.23 +1.9 3,102,011 + Psest_2910 0.23 -0.0 3,102,011 + Psest_2910 0.23 +1.1 3,102,012 - Psest_2910 0.23 +0.7 3,102,012 - Psest_2910 0.23 +0.4 3,102,012 - Psest_2910 0.23 +1.6 3,102,012 - Psest_2910 0.23 +0.1 3,102,012 - Psest_2910 0.23 +1.4 3,102,012 - Psest_2910 0.23 -0.9 3,102,012 - Psest_2910 0.23 -0.0 3,102,012 - Psest_2910 0.23 -0.7 3,102,012 - Psest_2910 0.23 +2.4 3,102,012 - Psest_2910 0.23 -1.5 3,102,012 - Psest_2910 0.23 +0.5 3,102,012 - Psest_2910 0.23 +0.6
Or see this region's nucleotide sequence