Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2870

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
3,060,384	+		Psest_2869	0.46	-0.6
3,060,384	+		Psest_2869	0.46	-0.9
3,060,384	+		Psest_2869	0.46	-1.2
3,060,384	+		Psest_2869	0.46	+0.4
3,060,385	-		Psest_2869	0.46	+2.5
3,060,516	+		Psest_2869	0.55	-0.5
3,060,516	+		Psest_2869	0.55	-1.7
3,060,516	+		Psest_2869	0.55	-0.9
3,060,517	-		Psest_2869	0.55	-0.5
3,060,517	-		Psest_2869	0.55	-0.9
3,060,517	-		Psest_2869	0.55	-0.9
3,060,517	-		Psest_2869	0.55	-0.8
3,060,517	-		Psest_2869	0.55	+1.4
3,060,517	-		Psest_2869	0.55	-0.1
3,060,519	+		Psest_2869	0.55	+0.5
3,060,519	+		Psest_2869	0.55	-1.6
3,060,520	-		Psest_2869	0.55	-0.7
3,060,606	+		Psest_2869	0.61	-0.6
3,060,607	-		Psest_2869	0.62	-0.0
3,060,607	-		Psest_2869	0.62	-1.9
3,060,616	-		Psest_2869	0.62	+0.1
3,060,616	-		Psest_2869	0.62	-0.9
3,060,616	-		Psest_2869	0.62	-1.2
3,060,957	-		Psest_2869	0.86	-0.3
3,061,038	+				-0.7
3,061,039	-				+0.3
3,061,072	+				+0.1
3,061,072	+				+0.6
3,061,073	-				-0.3
3,061,073	-				-0.5
3,061,217	+				-0.2
3,061,217	+				+2.1
3,061,218	-				+1.7
3,061,218	-				+0.5
3,061,218	-				+0.5
3,061,218	-				+0.8
3,061,239	+				+0.0
3,061,239	+				-0.9
3,061,239	+				-1.9
3,061,239	+				+0.8
3,061,239	+				-0.2
3,061,239	+				-1.2
3,061,239	+				-0.4
3,061,240	-				+1.3
3,061,240	-				+0.9
3,061,240	-				+1.4
3,061,240	-				+1.6
3,061,240	-				+4.9
3,061,240	-				+0.8
3,061,254	+				-0.8
3,061,254	+				-0.4
3,061,254	+				-0.0
3,061,255	-				+0.2
3,061,255	-				+0.9
3,061,255	-				-0.2
3,061,255	-				-0.9
3,061,277	-				-0.0
3,061,452	-		Psest_2870	0.18	-1.7
3,061,898	+		Psest_2870	0.59	-0.3
3,061,898	+		Psest_2870	0.59	-0.2
3,061,921	-		Psest_2870	0.61	+1.8
3,061,924	+		Psest_2870	0.61	-1.9
3,061,924	+		Psest_2870	0.61	-0.5
3,061,924	+		Psest_2870	0.61	+1.7
3,061,975	+		Psest_2870	0.66	-1.7
3,061,975	+		Psest_2870	0.66	-2.1
3,061,975	+		Psest_2870	0.66	+0.3
3,061,976	-		Psest_2870	0.66	-1.1
3,062,054	-		Psest_2870	0.73	-0.0
3,062,137	+		Psest_2870	0.81	+0.1
3,062,138	-		Psest_2870	0.81	-1.4
3,062,392	+				+0.5
3,062,392	+				-0.2
3,062,393	-				+0.3
3,062,393	-				+1.6
3,062,396	+				-0.3
3,062,396	+				-0.5
3,062,396	+				-1.2
3,062,396	+				-0.9
3,062,396	+				-1.1
3,062,396	+				-1.4
3,062,397	-				+2.4
3,062,397	-				+0.5
3,062,397	-				-0.1
3,062,400	+				+0.0
3,062,400	+				-3.0
3,062,400	+				-1.4
3,062,859	+		Psest_2871	0.88	+1.1
3,062,894	+				-2.0
3,062,895	-				+0.5
3,062,949	+				+2.1
3,062,949	+				+0.1
3,063,086	-		Psest_2872	0.16	-1.6
3,063,158	-		Psest_2872	0.23	-1.7
3,063,311	-		Psest_2872	0.38	+0.5
3,063,311	-		Psest_2872	0.38	+0.5