Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28410

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
2,970,022	-		PGA1_c28390	0.58	-0.0
2,970,028	+		PGA1_c28390	0.59	-0.3
2,970,030	+		PGA1_c28390	0.60	+1.2
2,970,039	+		PGA1_c28390	0.61	+0.7
2,970,044	+		PGA1_c28390	0.62	-2.8
2,970,052	-		PGA1_c28390	0.64	+2.0
2,970,110	-		PGA1_c28390	0.74	+1.7
2,970,133	-		PGA1_c28390	0.79	+1.6
2,970,189	+		PGA1_c28390	0.89	-0.3
2,970,198	+				+0.5
2,970,232	+				+0.1
2,970,244	-				+0.4
2,970,297	-				+1.0
2,970,314	+				+0.8
2,970,345	+				+0.6
2,970,379	-		PGA1_c28400	0.14	-0.6
2,970,424	-		PGA1_c28400	0.20	+1.0
2,970,436	+		PGA1_c28400	0.21	-1.3
2,970,444	-		PGA1_c28400	0.22	-0.6
2,970,444	-		PGA1_c28400	0.22	-0.2
2,970,463	+		PGA1_c28400	0.25	-1.1
2,970,524	-		PGA1_c28400	0.33	+0.2
2,970,612	-		PGA1_c28400	0.45	-1.0
2,970,781	+		PGA1_c28400	0.67	-0.2
2,970,781	+		PGA1_c28400	0.67	-1.2
2,970,838	+		PGA1_c28400	0.75	-1.7
2,970,845	+		PGA1_c28400	0.76	-0.0
2,970,854	+		PGA1_c28400	0.77	-0.4
2,970,859	+		PGA1_c28400	0.78	+1.0
2,970,919	-		PGA1_c28400	0.86	-0.5
2,970,925	+		PGA1_c28400	0.87	-1.1
2,970,925	+		PGA1_c28400	0.87	-1.2
2,970,932	+		PGA1_c28400	0.88	+1.4
2,970,972	+				-0.7
2,970,980	-				+1.0
2,970,980	-				-1.5
2,971,028	-				+0.2
2,971,028	-				+0.9
2,971,038	-				+1.3
2,971,053	-				-0.6
2,971,053	-				-1.3
2,971,053	-				-1.0
2,971,053	-				-0.6
2,971,053	-				-1.2
2,971,053	-				-2.6
2,971,053	-				-1.0
2,971,109	+		PGA1_c28410	0.10	-0.8
2,971,109	+		PGA1_c28410	0.10	+1.7
2,971,109	+		PGA1_c28410	0.10	+0.9
2,971,117	-		PGA1_c28410	0.11	-1.0
2,971,117	-		PGA1_c28410	0.11	+3.2
2,971,117	-		PGA1_c28410	0.11	+1.8
2,971,129	+		PGA1_c28410	0.13	+0.4
2,971,137	-		PGA1_c28410	0.14	-1.0
2,971,142	-		PGA1_c28410	0.14	-0.6
2,971,150	+		PGA1_c28410	0.15	+0.3
2,971,158	-		PGA1_c28410	0.16	+0.9
2,971,158	-		PGA1_c28410	0.16	+0.2
2,971,158	-		PGA1_c28410	0.16	-0.1
2,971,177	-		PGA1_c28410	0.18	+0.4
2,971,193	+		PGA1_c28410	0.20	-1.0
2,971,196	-		PGA1_c28410	0.21	-0.3
2,971,196	-		PGA1_c28410	0.21	+0.7
2,971,233	-		PGA1_c28410	0.25	+0.8
2,971,239	-		PGA1_c28410	0.26	+0.6
2,971,239	-		PGA1_c28410	0.26	-1.0
2,971,249	+		PGA1_c28410	0.27	+1.2
2,971,252	-		PGA1_c28410	0.27	-1.8
2,971,252	-		PGA1_c28410	0.27	+1.0
2,971,295	+		PGA1_c28410	0.32	+1.8
2,971,416	-		PGA1_c28410	0.47	+0.5
2,971,445	+		PGA1_c28410	0.50	+2.2
2,971,486	+		PGA1_c28410	0.55	+0.1
2,971,517	-		PGA1_c28410	0.58	+2.0
2,971,539	+		PGA1_c28410	0.61	+0.4
2,971,770	+		PGA1_c28410	0.88	+0.7
2,971,786	-				+0.1
2,971,872	-				-0.0
2,971,928	+				-1.6
2,972,096	+		PGA1_c28420	0.25	-0.8
2,972,125	+		PGA1_c28420	0.29	-1.6
2,972,141	-		PGA1_c28420	0.30	+0.5
2,972,166	-		PGA1_c28420	0.33	+0.4
2,972,174	-		PGA1_c28420	0.34	+1.1
2,972,181	-		PGA1_c28420	0.35	-1.2
2,972,194	-		PGA1_c28420	0.36	-1.3
2,972,244	+		PGA1_c28420	0.42	-1.7
2,972,252	-		PGA1_c28420	0.43	-1.4
2,972,300	+		PGA1_c28420	0.48	+0.5
2,972,300	+		PGA1_c28420	0.48	+0.3
2,972,308	-		PGA1_c28420	0.49	-0.2
2,972,334	-		PGA1_c28420	0.52	+0.1
2,972,338	-		PGA1_c28420	0.52	-1.5
2,972,389	-		PGA1_c28420	0.58	-2.5
2,972,389	-		PGA1_c28420	0.58	+1.1
2,972,424	-		PGA1_c28420	0.62	+1.0
2,972,493	-		PGA1_c28420	0.69	-1.6
2,972,581	-		PGA1_c28420	0.79	+1.1
2,972,582	-		PGA1_c28420	0.79	-0.3
2,972,660	-		PGA1_c28420	0.88	-0.8
2,972,663	+		PGA1_c28420	0.88	-0.3
2,972,793	+				+1.2
2,972,805	+				-1.5
2,972,825	+				+0.4
2,972,825	+				-0.3
2,972,825	+				+0.4
2,972,833	-				+0.8