Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28300

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
2,959,269	+		PGA1_c28290	0.29	-1.2
2,959,336	+		PGA1_c28290	0.35	-2.0
2,959,341	-		PGA1_c28290	0.35	+1.7
2,959,370	+		PGA1_c28290	0.38	-0.8
2,959,508	-		PGA1_c28290	0.50	+1.0
2,959,508	-		PGA1_c28290	0.50	+2.0
2,959,508	-		PGA1_c28290	0.50	+0.5
2,959,548	+		PGA1_c28290	0.53	+2.2
2,959,602	-		PGA1_c28290	0.58	-0.2
2,959,703	-		PGA1_c28290	0.67	+1.6
2,959,783	-		PGA1_c28290	0.74	+0.8
2,959,897	+		PGA1_c28290	0.84	-2.7
2,960,043	+				-1.0
2,960,043	+				+0.7
2,960,043	+				-0.1
2,960,043	+				-0.5
2,960,043	+				-0.5
2,960,043	+				-0.0
2,960,043	+				-0.0
2,960,043	+				+0.6
2,960,043	+				-0.6
2,960,043	+				-1.6
2,960,051	-				-1.3
2,960,051	-				-1.3
2,960,051	-				+0.5
2,960,080	+				+1.5
2,960,088	-				-0.0
2,960,102	+				+3.1
2,960,102	+				+0.4
2,960,105	-				-2.5
2,960,138	+				+1.0
2,960,147	+				+0.0
2,960,178	-				-0.0
2,960,213	+				-2.7
2,960,213	+				-2.7
2,960,294	-				+0.3
2,960,320	+				+0.7
2,960,328	-				-0.5
2,960,344	+		PGA1_c28300	0.11	-1.3
2,960,344	+		PGA1_c28300	0.11	-0.1
2,960,352	-		PGA1_c28300	0.12	+0.4
2,960,352	-		PGA1_c28300	0.12	+0.7
2,960,354	+		PGA1_c28300	0.13	+0.6
2,960,362	-		PGA1_c28300	0.14	-0.6
2,960,390	+		PGA1_c28300	0.18	+1.0
2,960,393	-		PGA1_c28300	0.18	+3.9
2,960,446	+		PGA1_c28300	0.26	+1.0
2,960,449	-		PGA1_c28300	0.27	-1.7
2,960,462	-		PGA1_c28300	0.28	+1.3
2,960,463	-		PGA1_c28300	0.29	-0.2
2,960,463	-		PGA1_c28300	0.29	-0.3
2,960,463	-		PGA1_c28300	0.29	+1.2
2,960,475	-		PGA1_c28300	0.30	+1.6
2,960,506	+		PGA1_c28300	0.35	+4.1
2,960,581	+		PGA1_c28300	0.46	+0.5
2,960,583	+		PGA1_c28300	0.46	+1.6
2,960,594	-		PGA1_c28300	0.48	+0.8
2,960,627	+		PGA1_c28300	0.53	-0.9
2,960,630	+		PGA1_c28300	0.53	+0.1
2,960,637	+		PGA1_c28300	0.54	-0.2
2,960,640	-		PGA1_c28300	0.55	+0.3
2,960,648	+		PGA1_c28300	0.56	+1.0
2,960,717	+		PGA1_c28300	0.66	+3.8
2,960,717	+		PGA1_c28300	0.66	-0.8
2,960,720	-		PGA1_c28300	0.66	-0.0
2,960,720	-		PGA1_c28300	0.66	+1.0
2,960,725	-		PGA1_c28300	0.67	-1.2
2,960,725	-		PGA1_c28300	0.67	-0.0
2,960,725	-		PGA1_c28300	0.67	-1.3
2,960,790	-		PGA1_c28300	0.77	-0.6
2,960,852	+		PGA1_c28300	0.86	-1.8
2,960,938	-				+1.0
2,960,953	+				+1.2
2,960,963	+				-0.0
2,960,998	-				-1.0
2,961,073	-				-0.6
2,961,209	-		PGA1_c28310	0.17	-1.1
2,961,219	-		PGA1_c28310	0.18	+0.1
2,961,273	+		PGA1_c28310	0.24	-1.7
2,961,306	+		PGA1_c28310	0.27	+0.3
2,961,351	-		PGA1_c28310	0.31	+0.4
2,961,427	-		PGA1_c28310	0.39	-1.3
2,961,468	+		PGA1_c28310	0.43	-0.8
2,961,519	-		PGA1_c28310	0.48	-0.0
2,961,519	-		PGA1_c28310	0.48	+0.3
2,961,652	-		PGA1_c28310	0.61	+0.4
2,961,674	+		PGA1_c28310	0.63	+0.7
2,961,731	-		PGA1_c28310	0.69	-0.7
2,961,758	+		PGA1_c28310	0.71	+1.7
2,961,758	+		PGA1_c28310	0.71	-0.6
2,961,766	-		PGA1_c28310	0.72	-1.0
2,961,766	-		PGA1_c28310	0.72	-0.4
2,961,813	-		PGA1_c28310	0.77	+1.2
2,961,934	+		PGA1_c28310	0.88	+1.5
2,961,940	-		PGA1_c28310	0.89	+1.5
2,961,942	+		PGA1_c28310	0.89	+0.3
2,961,942	-		PGA1_c28310	0.89	-0.2