Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2679

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
2,867,899	+		Psest_2677	0.86	-1.2
2,867,899	+		Psest_2677	0.86	+0.9
2,867,900	-		Psest_2677	0.86	-0.4
2,867,900	-		Psest_2677	0.86	+0.7
2,867,900	-		Psest_2677	0.86	-1.5
2,867,900	-		Psest_2677	0.86	+1.7
2,867,902	-		Psest_2677	0.86	+0.8
2,867,902	-		Psest_2677	0.86	-0.0
2,867,902	-		Psest_2677	0.86	+1.2
2,867,902	-		Psest_2677	0.86	+1.0
2,867,921	+		Psest_2677	0.87	-1.4
2,867,922	-		Psest_2677	0.87	+1.2
2,867,979	+				+1.3
2,867,979	+				-0.4
2,867,980	-				-0.2
2,867,992	+				-1.5
2,867,992	+				+2.2
2,867,992	+				-0.4
2,868,023	-				-2.0
2,868,417	+		Psest_2678	0.44	-0.8
2,868,417	+		Psest_2678	0.44	-0.1
2,868,417	+		Psest_2678	0.44	-2.1
2,868,417	+		Psest_2678	0.44	-2.4
2,868,417	+		Psest_2678	0.44	-0.3
2,868,417	+		Psest_2678	0.44	-0.6
2,868,418	-		Psest_2678	0.45	-0.7
2,868,455	-		Psest_2678	0.50	+0.2
2,868,455	-		Psest_2678	0.50	+2.0
2,868,455	-		Psest_2678	0.50	+0.6
2,868,586	-		Psest_2678	0.71	-0.6
2,868,750	+				+0.5
2,868,750	+				+0.5
2,868,750	+				-0.4
2,868,750	+				-1.2
2,868,750	+				-0.2
2,868,750	+				-0.6
2,868,750	+				-1.7
2,868,751	-				-0.4
2,868,751	-				+0.0
2,868,751	-				+0.0
2,868,751	-				-0.2
2,868,751	-				+1.1
2,868,751	-				+0.3
2,868,751	-				-0.7
2,868,751	-				-1.2
2,868,751	-				+0.8
2,868,781	-				-0.5
2,868,964	+		Psest_2679	0.16	+1.2
2,868,964	+		Psest_2679	0.16	+0.4
2,869,124	-		Psest_2679	0.33	+0.1
2,869,151	-		Psest_2679	0.36	+0.8
2,869,180	+		Psest_2679	0.39	-2.4
2,869,180	+		Psest_2679	0.39	-0.8
2,869,180	+		Psest_2679	0.39	+0.8
2,869,180	+		Psest_2679	0.39	-2.2
2,869,181	-		Psest_2679	0.39	-0.6
2,869,181	-		Psest_2679	0.39	-0.6
2,869,181	-		Psest_2679	0.39	-0.5
2,869,181	-		Psest_2679	0.39	-0.2
2,869,181	-		Psest_2679	0.39	-0.7
2,869,181	-		Psest_2679	0.39	-0.1
2,869,267	+		Psest_2679	0.49	-2.0
2,869,267	+		Psest_2679	0.49	+0.1
2,869,268	-		Psest_2679	0.49	-0.2
2,869,332	+		Psest_2679	0.55	-0.0
2,869,411	+		Psest_2679	0.64	-0.0
2,869,411	+		Psest_2679	0.64	+0.4
2,869,411	+		Psest_2679	0.64	+1.2
2,869,411	+		Psest_2679	0.64	+0.8
2,869,411	+		Psest_2679	0.64	-2.1
2,869,411	+		Psest_2679	0.64	+0.1
2,869,411	+		Psest_2679	0.64	-1.0
2,869,411	+		Psest_2679	0.64	-1.6
2,869,411	+		Psest_2679	0.64	-1.6
2,869,412	-		Psest_2679	0.64	-0.2
2,869,412	-		Psest_2679	0.64	-1.2
2,869,514	-		Psest_2679	0.75	+1.2
2,869,693	+				+1.0
2,869,694	-				-0.9
2,869,694	-				-1.2
2,869,718	-				-0.5
2,869,718	-				-0.2
2,869,752	+				-0.2
2,869,752	+				+0.4
2,869,752	+				-0.0
2,869,752	+				+0.2
2,869,753	-				-1.0
2,869,776	+				-1.0
2,869,777	-				-1.5
2,869,777	-				+0.9
2,869,793	-				-1.7
2,869,872	+				-1.9
2,869,873	-				-0.8
2,869,876	+				-1.2
2,869,876	+				-0.8
2,869,876	+				-2.8
2,869,877	-				+1.6
2,869,941	+		Psest_2680	0.24	-1.2
2,869,941	+		Psest_2680	0.24	+1.1
2,869,942	-		Psest_2680	0.24	-0.2
2,869,942	-		Psest_2680	0.24	-1.0
2,869,942	-		Psest_2680	0.24	+0.1
2,869,995	+		Psest_2680	0.42	-1.9
2,870,061	+		Psest_2680	0.64	+0.3
2,870,061	+		Psest_2680	0.64	-0.2
2,870,061	+		Psest_2680	0.64	-0.1
2,870,061	+		Psest_2680	0.64	-0.5
2,870,061	+		Psest_2680	0.64	+0.2
2,870,062	-		Psest_2680	0.64	+0.7
2,870,062	-		Psest_2680	0.64	+0.2
2,870,062	-		Psest_2680	0.64	-0.2
2,870,062	-		Psest_2680	0.64	+1.4
2,870,169	+				+1.5
2,870,169	+				-1.1
2,870,169	+				-0.7
2,870,169	+				+0.4
2,870,170	-				-1.4
2,870,170	-				-1.4
2,870,336	-		Psest_2681	0.31	-1.0
2,870,384	-		Psest_2681	0.40	-0.7
2,870,384	-		Psest_2681	0.40	-1.8
2,870,442	-		Psest_2681	0.51	+0.6
2,870,710	+				-1.5
2,870,710	+				-1.0
2,870,710	+				+0.9
2,870,710	+				+0.7
2,870,710	+				-1.0
2,870,710	+				+0.2
2,870,711	-				+0.2
2,870,711	-				-0.1
2,870,711	-				-0.1
2,870,711	-				+0.7
2,870,711	-				+0.6
2,870,711	-				-1.0
2,870,711	-				+1.2
2,870,711	-				-0.1
2,870,711	-				-1.7
2,870,711	-				-0.2
2,870,711	-				-1.6
2,870,714	+				+0.4
2,870,715	-				+2.4