Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23200

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
2,405,687	-		PGA1_c23190	0.64	+0.5
2,405,866	-		PGA1_c23190	0.77	-0.4
2,405,869	+		PGA1_c23190	0.77	-1.0
2,405,869	+		PGA1_c23190	0.77	+0.4
2,405,869	+		PGA1_c23190	0.77	+1.2
2,405,869	+		PGA1_c23190	0.77	+0.3
2,405,869	+		PGA1_c23190	0.77	-0.1
2,405,869	+		PGA1_c23190	0.77	+0.4
2,405,869	+		PGA1_c23190	0.77	-0.3
2,405,869	+		PGA1_c23190	0.77	+0.7
2,405,869	+		PGA1_c23190	0.77	-0.4
2,405,869	+		PGA1_c23190	0.77	+1.4
2,405,869	+		PGA1_c23190	0.77	+0.4
2,405,877	-		PGA1_c23190	0.77	-3.3
2,405,877	-		PGA1_c23190	0.77	+0.8
2,405,877	-		PGA1_c23190	0.77	-0.2
2,405,877	-		PGA1_c23190	0.77	-0.7
2,405,877	-		PGA1_c23190	0.77	-0.1
2,405,877	-		PGA1_c23190	0.77	+0.0
2,405,877	-		PGA1_c23190	0.77	-1.5
2,405,877	-		PGA1_c23190	0.77	-1.0
2,405,877	-		PGA1_c23190	0.77	-0.3
2,405,877	-		PGA1_c23190	0.77	+1.3
2,405,877	-		PGA1_c23190	0.77	-0.5
2,405,879	+		PGA1_c23190	0.78	+0.4
2,405,879	+		PGA1_c23190	0.78	-0.1
2,405,887	-		PGA1_c23190	0.78	+0.4
2,405,887	-		PGA1_c23190	0.78	-0.5
2,405,899	+		PGA1_c23190	0.79	-1.6
2,405,914	-		PGA1_c23190	0.80	-1.2
2,405,964	+		PGA1_c23190	0.84	+0.4
2,406,018	-		PGA1_c23190	0.88	+0.3
2,406,019	+		PGA1_c23190	0.88	-1.6
2,406,019	+		PGA1_c23190	0.88	+1.2
2,406,123	-				+0.5
2,406,130	-				-0.1
2,406,214	-				+0.7
2,406,307	-				-0.5
2,406,325	+				+1.0
2,406,381	+				-0.9
2,406,435	+				-0.1
2,406,437	+				+0.3
2,406,438	-				+1.0
2,406,446	+				+0.1
2,406,456	+				-0.5
2,406,486	-				+0.6
2,406,507	+				-0.6
2,406,572	+				+0.4
2,406,591	+				+0.6
2,406,606	+				-0.3
2,406,706	-				-0.8
2,406,706	-				+0.0
2,406,714	-				+1.9
2,406,738	+		PGA1_c23200	0.11	-0.4
2,406,755	+		PGA1_c23200	0.13	-0.7
2,406,756	-		PGA1_c23200	0.13	-0.5
2,406,756	-		PGA1_c23200	0.13	-1.1
2,406,816	-		PGA1_c23200	0.19	+0.4
2,406,894	+		PGA1_c23200	0.26	-0.9
2,406,902	-		PGA1_c23200	0.27	-0.2
2,406,983	+		PGA1_c23200	0.35	-0.2
2,407,016	+		PGA1_c23200	0.38	-0.6
2,407,016	+		PGA1_c23200	0.38	-2.0
2,407,016	+		PGA1_c23200	0.38	+0.5
2,407,016	+		PGA1_c23200	0.38	-1.6
2,407,016	+		PGA1_c23200	0.38	-1.6
2,407,016	+		PGA1_c23200	0.38	-2.0
2,407,026	-		PGA1_c23200	0.39	+1.4
2,407,034	-		PGA1_c23200	0.40	+2.0
2,407,272	-		PGA1_c23200	0.63	-1.1
2,407,276	-		PGA1_c23200	0.64	+0.4
2,407,317	+		PGA1_c23200	0.68	+0.3
2,407,329	+		PGA1_c23200	0.69	+0.4
2,407,378	+		PGA1_c23200	0.74	+0.2
2,407,391	-		PGA1_c23200	0.75	+0.0
2,407,413	-		PGA1_c23200	0.77	-1.2
2,407,423	+		PGA1_c23200	0.78	+0.5
2,407,490	+		PGA1_c23200	0.85	+0.3
2,407,490	+		PGA1_c23200	0.85	+1.2
2,407,509	+		PGA1_c23200	0.86	-0.4
2,407,509	+		PGA1_c23200	0.86	-1.1
2,407,546	+				+0.1
2,407,563	-				-2.4
2,407,583	+				-0.8
2,407,641	-				-1.4
2,407,642	+				-1.1
2,407,648	+				-0.1
2,407,650	-				+1.8
2,407,661	-				+0.2
2,407,684	-				-0.2
2,407,723	-				-0.4
2,407,758	+				-0.4
2,407,790	-				-1.8
2,407,798	-				-0.7
2,407,956	+		PGA1_c23210	0.35	-0.7
2,408,001	+		PGA1_c23210	0.47	-0.7
2,408,012	+		PGA1_c23210	0.50	-2.4
2,408,071	+		PGA1_c23210	0.65	-0.3
2,408,079	-		PGA1_c23210	0.67	-0.6
2,408,112	-		PGA1_c23210	0.75	-2.7
2,408,112	-		PGA1_c23210	0.75	+0.2
2,408,114	+		PGA1_c23210	0.76	-2.7
2,408,234	-				-0.5
2,408,278	+				+0.1
2,408,298	+				-2.6
2,408,306	-				+0.7
2,408,312	+				+2.0
2,408,341	+				+0.8
2,408,349	-				-0.6
2,408,358	-				+0.1
2,408,506	-				-2.9
2,408,554	-		PGA1_c23220	0.11	-1.0