Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22600

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
2,342,171	-		PGA1_c22580	0.51	-3.0
2,342,179	+		PGA1_c22580	0.52	+0.5
2,342,186	+		PGA1_c22580	0.52	+0.0
2,342,219	+		PGA1_c22580	0.55	+2.0
2,342,239	+		PGA1_c22580	0.57	-2.2
2,342,239	+		PGA1_c22580	0.57	-0.6
2,342,272	-		PGA1_c22580	0.59	-1.8
2,342,290	+		PGA1_c22580	0.61	-1.7
2,342,290	+		PGA1_c22580	0.61	+0.1
2,342,295	+		PGA1_c22580	0.61	-2.0
2,342,388	-		PGA1_c22580	0.69	+1.3
2,342,465	-		PGA1_c22580	0.75	-1.9
2,342,465	-		PGA1_c22580	0.75	-2.3
2,342,472	+		PGA1_c22580	0.75	-1.3
2,342,477	+		PGA1_c22580	0.76	+0.5
2,342,485	-		PGA1_c22580	0.76	+1.0
2,342,485	-		PGA1_c22580	0.76	+0.3
2,342,496	-		PGA1_c22580	0.77	+0.0
2,342,537	+		PGA1_c22580	0.80	-0.4
2,342,589	+		PGA1_c22580	0.85	-1.0
2,342,589	+		PGA1_c22580	0.85	-0.1
2,342,597	-		PGA1_c22580	0.85	-0.5
2,342,674	-				+0.2
2,342,738	+				-0.9
2,342,765	+				-0.1
2,343,026	-				+1.7
2,343,028	+				-0.4
2,343,028	+				+0.7
2,343,036	-				-1.1
2,343,036	-				+0.4
2,343,036	-				+0.6
2,343,036	-				+1.2
2,343,075	-				+2.1
2,343,085	+				-1.6
2,343,088	-				-0.9
2,343,093	-				-2.5
2,343,093	-				+1.6
2,343,125	+				-1.4
2,343,125	+				-0.6
2,343,252	+		PGA1_c22600	0.27	-2.2
2,343,260	-		PGA1_c22600	0.28	-0.1
2,343,260	-		PGA1_c22600	0.28	+0.1
2,343,312	+		PGA1_c22600	0.38	-1.4
2,343,326	-		PGA1_c22600	0.40	+0.2
2,343,415	-		PGA1_c22600	0.57	-1.3
2,343,427	+		PGA1_c22600	0.59	-0.6
2,343,427	+		PGA1_c22600	0.59	-0.9
2,343,427	+		PGA1_c22600	0.59	-1.0
2,343,427	+		PGA1_c22600	0.59	-2.0
2,343,427	+		PGA1_c22600	0.59	-0.3
2,343,427	+		PGA1_c22600	0.59	+0.0
2,343,435	-		PGA1_c22600	0.60	-0.9
2,343,435	-		PGA1_c22600	0.60	-1.3
2,343,435	-		PGA1_c22600	0.60	-1.0
2,343,435	-		PGA1_c22600	0.60	-0.6
2,343,437	+		PGA1_c22600	0.61	-0.5
2,343,451	+		PGA1_c22600	0.63	-2.3
2,343,461	+		PGA1_c22600	0.65	-1.6
2,343,461	+		PGA1_c22600	0.65	-0.2
2,343,463	+		PGA1_c22600	0.65	-2.7
2,343,515	-		PGA1_c22600	0.75	+0.9
2,343,540	-		PGA1_c22600	0.79	-2.6
2,343,622	+				+0.5
2,343,734	+				-0.1
2,343,742	-				+0.6
2,343,794	+				-0.3
2,343,794	+				+1.8
2,343,794	+				-0.9
2,343,801	+				-0.2
2,343,802	-				-0.3
2,343,802	-				-0.5
2,343,802	-				-0.7
2,343,802	-				-0.2
2,343,802	-				+0.9
2,343,820	+				+1.5
2,343,852	+				+1.9
2,343,872	+				+0.5
2,343,898	+				-2.9
2,343,905	-				-1.1
2,343,906	-				+1.0
2,343,906	-				+0.5
2,343,955	+				+1.1
2,343,990	+				-0.8
2,344,009	-				+1.6
2,344,021	+				-1.9
2,344,030	+				-1.1
2,344,037	-				+0.8
2,344,109	+		PGA1_c22610	0.15	-0.2
2,344,154	-		PGA1_c22610	0.21	+0.7
2,344,168	-		PGA1_c22610	0.23	-2.4
2,344,177	+		PGA1_c22610	0.24	-0.7
2,344,185	-		PGA1_c22610	0.25	+0.0
2,344,185	-		PGA1_c22610	0.25	+0.6
2,344,187	+		PGA1_c22610	0.25	-0.1
2,344,392	-		PGA1_c22610	0.54	-0.2
2,344,401	+		PGA1_c22610	0.55	-0.5
2,344,579	+		PGA1_c22610	0.80	-3.6
2,344,587	-		PGA1_c22610	0.81	-3.0
2,344,587	-		PGA1_c22610	0.81	+1.1
2,344,587	-		PGA1_c22610	0.81	-1.2