Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2250

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
2,398,293	-		Psest_2248	0.11	-0.4
2,398,293	-		Psest_2248	0.11	+1.0
2,398,400	-		Psest_2248	0.41	-0.3
2,398,581	+				-1.2
2,398,581	+				-1.4
2,398,589	+				+2.3
2,398,589	+				-1.8
2,398,589	+				+0.6
2,398,590	-				-1.6
2,398,614	+				-0.2
2,398,615	-				+1.0
2,398,615	-				+1.3
2,398,666	+		Psest_2249	0.11	-1.4
2,398,666	+		Psest_2249	0.11	+0.5
2,398,666	+		Psest_2249	0.11	-0.7
2,398,666	+		Psest_2249	0.11	-0.8
2,398,666	+		Psest_2249	0.11	-0.2
2,398,667	-		Psest_2249	0.11	-1.9
2,398,667	-		Psest_2249	0.11	-0.3
2,398,667	-		Psest_2249	0.11	-0.8
2,398,667	-		Psest_2249	0.11	+0.0
2,398,667	-		Psest_2249	0.11	-0.3
2,398,667	-		Psest_2249	0.11	+1.5
2,398,739	+		Psest_2249	0.29	+0.2
2,398,739	+		Psest_2249	0.29	-1.6
2,398,740	-		Psest_2249	0.29	-2.2
2,398,782	+		Psest_2249	0.39	+0.3
2,398,782	+		Psest_2249	0.39	+0.5
2,398,782	+		Psest_2249	0.39	+0.9
2,398,783	-		Psest_2249	0.39	-0.8
2,398,783	-		Psest_2249	0.39	-0.2
2,398,783	-		Psest_2249	0.39	-0.9
2,398,783	-		Psest_2249	0.39	-1.5
2,398,894	+		Psest_2249	0.66	-2.0
2,398,894	+		Psest_2249	0.66	-0.7
2,398,894	+		Psest_2249	0.66	+0.2
2,398,895	-		Psest_2249	0.66	-0.0
2,399,027	+				-0.3
2,399,028	-				-0.7
2,399,068	+				+0.8
2,399,121	+				-0.3
2,399,297	+				+0.8
2,399,297	+				+0.6
2,399,297	+				-0.5
2,399,298	-				+0.3
2,399,324	+				-0.7
2,399,477	-		Psest_2250	0.23	-1.6
2,399,542	+		Psest_2250	0.29	+1.1
2,399,654	+		Psest_2250	0.39	-0.1
2,399,654	+		Psest_2250	0.39	+0.9
2,399,729	-		Psest_2250	0.46	-1.5
2,399,729	-		Psest_2250	0.46	-0.9
2,400,144	+		Psest_2250	0.84	-0.3
2,400,144	+		Psest_2250	0.84	-0.4
2,400,144	+		Psest_2250	0.84	-0.9
2,400,145	-		Psest_2250	0.84	+0.9
2,400,145	-		Psest_2250	0.84	+0.9
2,400,145	-		Psest_2250	0.84	-0.6
2,400,150	+		Psest_2250	0.85	+0.6
2,400,151	-		Psest_2250	0.85	-0.1
2,400,151	-		Psest_2250	0.85	-1.1
2,400,260	-				+0.1
2,400,311	+				-0.0
2,400,353	+				+0.0
2,400,353	+				-0.3
2,400,353	+				-0.4
2,400,353	+				+1.7
2,400,353	+				+0.5
2,400,353	+				+0.3
2,400,354	-				-1.0
2,400,354	-				-0.9
2,400,354	-				+0.7
2,400,354	-				-1.1
2,400,354	-				-1.7
2,400,354	-				-1.2
2,400,354	-				-1.6
2,400,354	-				+0.9
2,400,358	-				+0.8
2,400,614	+		Psest_2251	0.23	-3.0
2,400,614	+		Psest_2251	0.23	+0.0
2,400,614	+		Psest_2251	0.23	+0.8
2,400,614	+		Psest_2251	0.23	-0.2
2,400,614	+		Psest_2251	0.23	+0.3
2,400,615	-		Psest_2251	0.23	+1.9
2,400,615	-		Psest_2251	0.23	+1.0
2,400,615	-		Psest_2251	0.23	+0.8
2,400,615	-		Psest_2251	0.23	-0.7
2,400,702	+		Psest_2251	0.31	-0.1
2,400,702	+		Psest_2251	0.31	-0.5
2,400,702	+		Psest_2251	0.31	-0.8
2,400,702	+		Psest_2251	0.31	+1.0
2,400,702	+		Psest_2251	0.31	+0.4
2,400,702	+		Psest_2251	0.31	-0.2
2,400,703	-		Psest_2251	0.32	+0.0
2,400,749	+		Psest_2251	0.36	+0.0
2,400,749	+		Psest_2251	0.36	+0.6
2,400,749	+		Psest_2251	0.36	+0.0
2,400,749	+		Psest_2251	0.36	+0.5
2,400,749	+		Psest_2251	0.36	-0.4
2,400,749	+		Psest_2251	0.36	-0.6
2,400,749	+		Psest_2251	0.36	-0.5
2,400,749	+		Psest_2251	0.36	+0.0
2,400,749	+		Psest_2251	0.36	+1.3
2,400,749	+		Psest_2251	0.36	-0.7
2,400,749	+		Psest_2251	0.36	+0.3
2,400,749	+		Psest_2251	0.36	-0.1
2,400,749	+		Psest_2251	0.36	-0.2
2,400,749	+		Psest_2251	0.36	+1.0
2,400,749	+		Psest_2251	0.36	+0.3
2,400,749	+		Psest_2251	0.36	-1.9
2,400,749	+		Psest_2251	0.36	-0.2
2,400,750	-		Psest_2251	0.36	-0.4
2,400,750	-		Psest_2251	0.36	+1.1
2,400,750	-		Psest_2251	0.36	-1.0
2,400,750	-		Psest_2251	0.36	-0.4
2,400,965	+		Psest_2251	0.56	+0.2
2,400,965	+		Psest_2251	0.56	+0.4
2,400,965	+		Psest_2251	0.56	+0.3
2,400,965	+		Psest_2251	0.56	-0.8
2,400,965	+		Psest_2251	0.56	-1.2
2,400,965	+		Psest_2251	0.56	-1.5
2,400,965	+		Psest_2251	0.56	-1.5
2,400,966	-		Psest_2251	0.56	+0.5
2,400,966	-		Psest_2251	0.56	+0.8
2,400,966	-		Psest_2251	0.56	-1.1
2,400,966	-		Psest_2251	0.56	-0.2
2,400,966	-		Psest_2251	0.56	-0.1
2,401,183	-		Psest_2251	0.76	+0.1
2,401,310	+		Psest_2251	0.88	-0.5
2,401,311	-		Psest_2251	0.88	+1.3
2,401,311	-		Psest_2251	0.88	+0.9