Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20880

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
2,164,646	+		PGA1_c20870	0.69	+0.1
2,164,654	-		PGA1_c20870	0.69	-1.6
2,164,657	+		PGA1_c20870	0.69	-1.5
2,164,667	+		PGA1_c20870	0.70	-2.5
2,164,667	+		PGA1_c20870	0.70	+0.2
2,164,667	+		PGA1_c20870	0.70	+0.0
2,164,808	+		PGA1_c20870	0.76	-2.1
2,164,816	-		PGA1_c20870	0.76	-0.4
2,165,013	-		PGA1_c20870	0.84	+1.6
2,165,015	+		PGA1_c20870	0.84	+0.0
2,165,065	+		PGA1_c20870	0.87	+0.9
2,165,065	+		PGA1_c20870	0.87	-0.7
2,165,089	-		PGA1_c20870	0.88	+1.4
2,165,129	+		PGA1_c20870	0.89	-1.2
2,165,137	+		PGA1_c20870	0.90	+1.5
2,165,145	-				-0.4
2,165,145	-				-0.5
2,165,192	+				-0.4
2,165,210	+				-0.5
2,165,300	-				+0.6
2,165,328	+				-1.3
2,165,336	-				-0.1
2,165,353	-				-2.2
2,165,373	-				-1.7
2,165,391	-				-0.3
2,165,414	+				-0.1
2,165,414	+				-1.3
2,165,414	+				-1.3
2,165,472	-				-0.0
2,165,472	-				-0.0
2,165,594	-				-1.9
2,165,598	-				+0.1
2,165,598	-				-1.4
2,165,602	-				-2.3
2,165,603	-				-0.7
2,165,639	+		PGA1_c20880	0.14	-1.8
2,165,647	+		PGA1_c20880	0.16	+1.2
2,165,651	+		PGA1_c20880	0.16	+0.3
2,165,661	+		PGA1_c20880	0.19	-1.3
2,165,662	+		PGA1_c20880	0.19	+0.2
2,165,670	-		PGA1_c20880	0.20	-1.8
2,165,704	-		PGA1_c20880	0.27	-2.6
2,165,715	-		PGA1_c20880	0.30	-0.3
2,165,736	-		PGA1_c20880	0.34	-2.4
2,165,969	-		PGA1_c20880	0.82	-0.8
2,166,065	+				-1.4
2,166,065	+				-2.0
2,166,093	+				-1.3
2,166,110	-				-3.0
2,166,111	-				+1.7
2,166,124	+				+0.8
2,166,171	-				-1.8
2,166,171	-				+0.3
2,166,198	-				+0.0
2,166,202	-				+0.4
2,166,340	+		PGA1_c20890	0.16	+0.4
2,166,340	+		PGA1_c20890	0.16	+0.8
2,166,472	+		PGA1_c20890	0.30	-1.8
2,166,739	+		PGA1_c20890	0.56	-0.5
2,166,747	+		PGA1_c20890	0.57	-0.3
2,166,747	-		PGA1_c20890	0.57	+0.2
2,166,778	+		PGA1_c20890	0.60	+1.9
2,166,809	+		PGA1_c20890	0.63	-0.4
2,166,834	+		PGA1_c20890	0.66	+0.7
2,166,866	+		PGA1_c20890	0.69	-2.3
2,166,869	-		PGA1_c20890	0.69	+0.8
2,166,877	+		PGA1_c20890	0.70	+1.4
2,166,885	-		PGA1_c20890	0.71	-1.5
2,166,885	-		PGA1_c20890	0.71	-0.0
2,166,939	+		PGA1_c20890	0.76	+0.2
2,167,007	-		PGA1_c20890	0.83	-1.5
2,167,031	-		PGA1_c20890	0.85	+1.6