Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20700

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
2,145,248	+		PGA1_c20690	0.26	+0.2
2,145,289	-		PGA1_c20690	0.29	-0.9
2,145,292	+		PGA1_c20690	0.29	-0.1
2,145,330	+		PGA1_c20690	0.32	+0.0
2,145,343	-		PGA1_c20690	0.33	+0.4
2,145,343	-		PGA1_c20690	0.33	+1.0
2,145,403	+		PGA1_c20690	0.38	-1.0
2,145,553	-		PGA1_c20690	0.50	-1.5
2,145,603	+		PGA1_c20690	0.54	-1.1
2,145,715	-		PGA1_c20690	0.63	-0.3
2,145,765	-		PGA1_c20690	0.67	-0.6
2,145,790	+		PGA1_c20690	0.69	-1.2
2,145,798	-		PGA1_c20690	0.70	+0.5
2,145,850	+		PGA1_c20690	0.74	+1.0
2,145,877	-		PGA1_c20690	0.77	-0.8
2,145,967	-		PGA1_c20690	0.84	+0.0
2,146,049	-				+0.2
2,146,123	-				+0.7
2,146,184	-				+0.2
2,146,299	-				-0.2
2,146,299	-				+0.6
2,146,310	+				-1.0
2,146,318	-				+1.3
2,146,318	-				-0.7
2,146,318	-				+0.5
2,146,332	-				-2.8
2,146,347	-		PGA1_c20700	0.10	+0.0
2,146,389	-		PGA1_c20700	0.13	-0.9
2,146,408	-		PGA1_c20700	0.14	-1.0
2,146,498	-		PGA1_c20700	0.19	+0.4
2,146,685	-		PGA1_c20700	0.29	-1.1
2,146,754	+		PGA1_c20700	0.33	+0.8
2,146,788	+		PGA1_c20700	0.35	-1.0
2,146,843	+		PGA1_c20700	0.38	+0.4
2,146,845	-		PGA1_c20700	0.38	+0.3
2,146,937	+		PGA1_c20700	0.43	-0.6
2,146,991	-		PGA1_c20700	0.46	+1.0
2,147,033	-		PGA1_c20700	0.48	-2.5
2,147,265	-		PGA1_c20700	0.61	-0.5
2,147,289	-		PGA1_c20700	0.63	-0.7
2,147,313	-		PGA1_c20700	0.64	-2.1
2,147,402	-		PGA1_c20700	0.69	+0.9
2,147,531	+		PGA1_c20700	0.76	+0.0
2,147,538	-		PGA1_c20700	0.76	-0.9
2,147,539	-		PGA1_c20700	0.76	+0.0
2,147,546	-		PGA1_c20700	0.77	+0.9
2,147,549	-		PGA1_c20700	0.77	-3.0
2,147,552	+		PGA1_c20700	0.77	-1.8
2,147,557	+		PGA1_c20700	0.77	+0.4
2,147,557	+		PGA1_c20700	0.77	-2.7
2,147,592	-		PGA1_c20700	0.79	+0.3
2,147,607	-		PGA1_c20700	0.80	-1.2
2,147,740	-		PGA1_c20700	0.88	-0.4
2,147,880	+				-0.1
2,147,880	+				-0.2
2,147,927	+				-0.5
2,147,935	-				-0.4
2,147,972	+				-2.0
2,147,976	+				+1.6
2,147,984	-				+0.0
2,147,986	+				-0.9
2,147,999	+				-1.1
2,148,128	+				-2.2
2,148,153	+		PGA1_c20710	0.12	-2.3
2,148,153	+		PGA1_c20710	0.12	+0.2
2,148,161	-		PGA1_c20710	0.12	-0.1
2,148,161	-		PGA1_c20710	0.12	+0.5
2,148,161	-		PGA1_c20710	0.12	+0.6
2,148,161	-		PGA1_c20710	0.12	-0.5
2,148,263	+		PGA1_c20710	0.21	-1.0
2,148,332	+		PGA1_c20710	0.27	+0.2
2,148,367	+		PGA1_c20710	0.30	-0.4
2,148,367	+		PGA1_c20710	0.30	-0.1
2,148,367	+		PGA1_c20710	0.30	+0.3
2,148,367	+		PGA1_c20710	0.30	-0.4
2,148,375	-		PGA1_c20710	0.30	-0.1
2,148,377	+		PGA1_c20710	0.31	+1.0
2,148,378	+		PGA1_c20710	0.31	+0.5
2,148,396	-		PGA1_c20710	0.32	+0.0
2,148,402	+		PGA1_c20710	0.33	+1.6
2,148,458	+		PGA1_c20710	0.37	-0.5
2,148,458	+		PGA1_c20710	0.37	-0.0
2,148,612	-		PGA1_c20710	0.50	+0.2
2,148,625	-		PGA1_c20710	0.51	+0.4
2,148,644	-		PGA1_c20710	0.53	-0.8
2,148,667	-		PGA1_c20710	0.55	-0.8
2,148,706	+		PGA1_c20710	0.58	+0.8
2,148,709	+		PGA1_c20710	0.59	+0.6
2,148,719	+		PGA1_c20710	0.59	+1.4
2,148,719	+		PGA1_c20710	0.59	-0.8
2,148,736	+		PGA1_c20710	0.61	+2.4
2,148,763	-		PGA1_c20710	0.63	+1.3
2,148,861	+		PGA1_c20710	0.71	+0.6
2,148,891	-		PGA1_c20710	0.74	+3.6
2,148,925	+		PGA1_c20710	0.77	-0.5