Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2049

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
2,169,945	+				+0.0
2,170,198	-		Psest_2048	0.45	-0.3
2,170,424	-		Psest_2048	0.79	-1.0
2,170,516	+				+0.1
2,170,516	+				-0.8
2,170,714	+				+1.6
2,170,715	-				+0.8
2,170,728	+				+1.1
2,170,778	-				+0.7
2,171,228	+		Psest_2049	0.13	-0.9
2,171,228	+		Psest_2049	0.13	-1.8
2,171,229	-		Psest_2049	0.13	-0.1
2,171,394	-		Psest_2049	0.21	+0.5
2,171,405	-		Psest_2049	0.21	+0.6
2,171,657	-		Psest_2049	0.32	+0.2
2,171,714	+		Psest_2049	0.35	-0.9
2,171,715	-		Psest_2049	0.35	-1.5
2,171,715	-		Psest_2049	0.35	+1.1
2,171,744	+		Psest_2049	0.36	-0.5
2,171,745	-		Psest_2049	0.36	-0.0
2,171,834	+		Psest_2049	0.40	+0.8
2,171,835	-		Psest_2049	0.40	+0.6
2,171,835	-		Psest_2049	0.40	-0.2
2,171,886	-		Psest_2049	0.42	-0.0
2,171,898	-		Psest_2049	0.43	-0.4
2,172,163	+		Psest_2049	0.54	-0.7
2,172,163	+		Psest_2049	0.54	-1.1
2,172,176	+		Psest_2049	0.55	-0.7
2,172,177	-		Psest_2049	0.55	+0.1
2,172,177	-		Psest_2049	0.55	+0.7
2,172,177	-		Psest_2049	0.55	+0.8
2,172,177	-		Psest_2049	0.55	+0.6
2,172,234	-		Psest_2049	0.57	+1.6
2,172,236	-		Psest_2049	0.57	+1.5
2,172,603	-		Psest_2049	0.73	+0.6
2,172,603	-		Psest_2049	0.73	+0.2
2,172,689	+		Psest_2049	0.77	+0.4
2,172,690	-		Psest_2049	0.77	-1.0
2,172,690	-		Psest_2049	0.77	+1.0
2,172,803	+		Psest_2049	0.82	+0.3
2,172,803	+		Psest_2049	0.82	+0.7
2,172,804	-		Psest_2049	0.82	+0.4
2,172,804	-		Psest_2049	0.82	+0.3
2,172,853	+		Psest_2049	0.84	+0.5
2,172,853	+		Psest_2049	0.84	+0.1
2,172,905	+		Psest_2049	0.86	+0.8
2,172,905	+		Psest_2049	0.86	+1.3
2,172,905	+		Psest_2049	0.86	-0.2
2,172,906	-		Psest_2049	0.86	+0.5
2,172,910	-		Psest_2049	0.87	+1.5
2,172,910	-		Psest_2049	0.87	+0.7
2,172,951	+		Psest_2049	0.88	+0.5
2,172,951	+		Psest_2049	0.88	+1.5
2,172,951	+		Psest_2049	0.88	+1.7
2,172,952	-		Psest_2049	0.88	+0.6
2,172,952	-		Psest_2049	0.88	+1.3
2,172,952	-		Psest_2049	0.88	+0.7
2,172,952	-		Psest_2049	0.88	-0.5
2,172,952	-		Psest_2049	0.88	+0.5
2,173,011	+				+0.7
2,173,011	+				-0.3
2,173,012	-				+0.2
2,173,216	-				+0.4
2,173,272	+				-0.8
2,173,272	+				-1.0
2,173,272	+				+1.4
2,173,273	-				+1.9
2,173,273	-				-1.8
2,173,273	-				-0.1
2,173,273	-				+0.8
2,173,273	-				+0.6
2,173,273	-				-1.1
2,173,273	-				+0.7
2,173,313	+				-1.2
2,173,313	+				-0.2
2,173,313	+				-1.8
2,173,314	-				-0.2
2,173,314	-				+1.7
2,173,314	-				+0.8
2,173,314	-				+1.2
2,173,314	-				+2.9
2,173,317	+				-0.4
2,173,317	+				-0.7
2,173,317	+				+0.4
2,173,317	+				-1.7
2,173,317	+				-0.1
2,173,317	+				-1.9
2,173,318	-				+0.0
2,173,318	-				+0.3
2,173,318	-				+2.0
2,173,318	-				+1.0
2,173,318	-				+4.6
2,173,318	-				+0.7
2,173,318	-				+0.6
2,173,318	-				+1.4
2,173,318	-				+1.6
2,173,318	-				-0.6
2,173,435	+				-1.3
2,173,436	-				-0.3
2,173,436	-				+1.5
2,173,525	+				-0.6
2,173,526	-				+0.9
2,173,526	-				+0.4
2,173,526	-				+0.1
2,173,528	+				+1.4
2,173,528	+				-0.8
2,173,529	-				+0.9
2,173,529	-				-0.3
2,173,589	+		Psest_2050	0.11	+0.7
2,173,589	+		Psest_2050	0.11	+0.4
2,173,589	+		Psest_2050	0.11	+1.2
2,173,590	-		Psest_2050	0.11	+0.8
2,173,590	-		Psest_2050	0.11	+0.9
2,173,590	-		Psest_2050	0.11	+0.6
2,173,590	-		Psest_2050	0.11	-2.3
2,173,590	-		Psest_2050	0.11	+0.5
2,173,590	-		Psest_2050	0.11	-1.4
2,173,590	-		Psest_2050	0.11	+1.9
2,173,798	+		Psest_2050	0.29	+0.7
2,173,895	+		Psest_2050	0.37	+1.4
2,173,895	+		Psest_2050	0.37	+1.5
2,173,895	+		Psest_2050	0.37	+0.1
2,173,895	+		Psest_2050	0.37	+1.1
2,173,896	-		Psest_2050	0.38	-1.1
2,173,896	-		Psest_2050	0.38	-0.1
2,173,896	-		Psest_2050	0.38	+0.7
2,173,896	-		Psest_2050	0.38	-0.4
2,173,896	-		Psest_2050	0.38	-2.0
2,173,896	-		Psest_2050	0.38	-0.3
2,173,896	-		Psest_2050	0.38	+1.7
2,173,896	-		Psest_2050	0.38	-0.2
2,173,931	-		Psest_2050	0.41	-0.4
2,173,944	+		Psest_2050	0.42	+1.6
2,174,112	+		Psest_2050	0.56	+0.3