Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18060

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
1,886,454	-				-0.6
1,886,511	+				+2.0
1,886,519	-				-0.1
1,886,519	-				+0.1
1,886,589	+				+2.6
1,886,597	-				+0.2
1,886,709	+		PGA1_c18050	0.15	+0.3
1,886,715	-		PGA1_c18050	0.16	+1.1
1,886,715	-		PGA1_c18050	0.16	-0.6
1,886,717	+		PGA1_c18050	0.16	-1.2
1,886,748	-		PGA1_c18050	0.22	-0.1
1,886,864	+		PGA1_c18050	0.42	+2.5
1,886,864	+		PGA1_c18050	0.42	-0.4
1,887,002	-		PGA1_c18050	0.66	-0.8
1,887,017	+		PGA1_c18050	0.69	-0.6
1,887,095	-		PGA1_c18050	0.82	-0.2
1,887,208	+				-0.3
1,887,208	+				-0.2
1,887,208	+				-0.3
1,887,208	+				-0.3
1,887,208	+				+0.6
1,887,208	+				-0.8
1,887,208	+				+0.1
1,887,208	+				-1.6
1,887,208	+				+1.1
1,887,216	-				-0.7
1,887,216	-				-0.7
1,887,216	-				-4.0
1,887,273	+				-1.0
1,887,273	+				+3.3
1,887,273	+				-0.1
1,887,281	+				+0.3
1,887,325	-				+1.6
1,887,325	-				+0.6
1,887,340	+				+0.5
1,887,342	+				-0.3
1,887,350	-				+0.0
1,887,350	-				+0.6
1,887,368	+				+0.3
1,887,407	+				+1.2
1,887,434	-				+0.7
1,887,445	+				-1.0
1,887,445	+				-0.9
1,887,450	-				+0.8
1,887,453	-				+1.1
1,887,522	+		PGA1_c18060	0.17	+2.0
1,887,530	-		PGA1_c18060	0.18	-0.5
1,887,582	+		PGA1_c18060	0.27	-0.4
1,887,590	-		PGA1_c18060	0.28	+0.3
1,887,703	-		PGA1_c18060	0.47	+0.2
1,887,785	+		PGA1_c18060	0.61	+1.4
1,887,833	-		PGA1_c18060	0.69	+1.3
1,887,852	+		PGA1_c18060	0.72	-2.2
1,887,852	+		PGA1_c18060	0.72	+0.2
1,887,852	+		PGA1_c18060	0.72	-0.2
1,887,875	-		PGA1_c18060	0.76	+0.9
1,887,875	-		PGA1_c18060	0.76	+0.2
1,887,893	-		PGA1_c18060	0.79	+0.4
1,887,908	+		PGA1_c18060	0.81	+0.8
1,887,918	-		PGA1_c18060	0.83	+0.4
1,887,918	-		PGA1_c18060	0.83	+1.1
1,887,918	-		PGA1_c18060	0.83	-1.9
1,887,940	+		PGA1_c18060	0.87	+0.3
1,887,940	+		PGA1_c18060	0.87	+0.2
1,887,948	+		PGA1_c18060	0.88	+0.7
1,887,948	+		PGA1_c18060	0.88	-3.1
1,887,948	+		PGA1_c18060	0.88	+1.3
1,887,948	-		PGA1_c18060	0.88	+1.9
1,887,956	-		PGA1_c18060	0.89	-1.4
1,887,991	-				-0.9
1,888,052	-				+0.9
1,888,054	+				-1.2
1,888,054	+				+0.4
1,888,062	-				-1.8
1,888,083	+				-2.3
1,888,091	-				+0.6
1,888,091	-				+0.4
1,888,093	+				-0.8
1,888,097	-				+0.9
1,888,130	-				+1.0
1,888,140	+				+0.5
1,888,178	+				-1.1
1,888,203	+				-2.0
1,888,208	+				+0.5
1,888,208	+				-0.8
1,888,208	+				+0.2
1,888,216	-				-1.2
1,888,216	-				+0.0
1,888,216	-				+0.5
1,888,216	-				-2.4
1,888,216	-				+0.5
1,888,216	-				-1.0
1,888,216	-				+0.4
1,888,216	-				+0.4
1,888,243	+				+1.0
1,888,251	+				-0.5
1,888,318	+		PGA1_c18080	0.18	+1.1
1,888,326	-		PGA1_c18080	0.21	-2.6
1,888,326	-		PGA1_c18080	0.21	-0.3
1,888,326	-		PGA1_c18080	0.21	+4.2
1,888,331	-		PGA1_c18080	0.22	+0.4
1,888,349	+		PGA1_c18080	0.28	-2.2
1,888,405	+		PGA1_c18080	0.44	+0.1
1,888,413	-		PGA1_c18080	0.47	+0.8
1,888,444	+		PGA1_c18080	0.56	+0.4
1,888,487	+		PGA1_c18080	0.69	+0.6
1,888,492	+		PGA1_c18080	0.71	-0.6
1,888,492	+		PGA1_c18080	0.71	-1.0
1,888,492	+		PGA1_c18080	0.71	+1.0
1,888,492	+		PGA1_c18080	0.71	-0.2
1,888,492	+		PGA1_c18080	0.71	+0.7
1,888,500	-		PGA1_c18080	0.73	-0.2
1,888,500	-		PGA1_c18080	0.73	-0.3
1,888,500	-		PGA1_c18080	0.73	+0.7
1,888,500	-		PGA1_c18080	0.73	-0.1