Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1415

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
1,522,303	-				-0.5
1,522,390	+				+1.7
1,522,390	+				+2.5
1,522,390	+				-0.5
1,522,391	-				+2.5
1,522,391	-				+0.3
1,522,444	+				+0.9
1,522,456	+				-1.0
1,522,495	+		Psest_1414	0.13	-0.3
1,522,495	+		Psest_1414	0.13	-0.5
1,522,495	+		Psest_1414	0.13	+0.0
1,522,495	+		Psest_1414	0.13	+0.7
1,522,495	+		Psest_1414	0.13	-0.7
1,522,495	+		Psest_1414	0.13	+0.5
1,522,495	+		Psest_1414	0.13	+0.6
1,522,496	-		Psest_1414	0.13	+1.7
1,522,496	-		Psest_1414	0.13	+1.3
1,522,496	-		Psest_1414	0.13	+2.3
1,522,496	-		Psest_1414	0.13	+3.9
1,522,762	-		Psest_1414	0.81	+0.7
1,522,780	+		Psest_1414	0.86	+0.5
1,522,781	-		Psest_1414	0.86	+2.3
1,522,781	-		Psest_1414	0.86	-1.2
1,522,781	-		Psest_1414	0.86	+0.5
1,522,781	-		Psest_1414	0.86	-0.0
1,522,781	-		Psest_1414	0.86	+1.2
1,522,803	-				+0.9
1,522,803	-				+0.3
1,522,821	+				+2.0
1,522,821	+				-1.0
1,522,821	+				-1.0
1,522,821	+				-0.5
1,522,821	+				+0.0
1,522,821	+				-0.8
1,522,821	+				+0.4
1,522,821	+				+0.9
1,522,821	+				-1.9
1,522,821	+				+0.0
1,522,821	+				-1.7
1,522,822	-				+1.2
1,522,822	-				+1.6
1,522,822	-				+1.4
1,522,822	-				+2.5
1,522,822	-				+0.6
1,522,822	-				+0.0
1,522,847	+				-0.8
1,522,886	+				-0.5
1,522,886	+				+0.5
1,522,887	-				+2.0
1,522,887	-				+1.3
1,523,155	+				-0.8
1,523,179	+				+2.0
1,523,214	+				+0.7
1,523,215	-				-0.3
1,523,225	+				-0.4
1,523,226	-				+2.4
1,523,226	-				-1.0
1,523,226	-				+0.0
1,523,327	-				+1.0
1,523,350	+				+0.0
1,523,350	+				-0.3
1,523,351	-				-0.6
1,523,427	+				-2.1
1,523,427	+				+0.0
1,523,427	+				+1.2
1,523,427	+				+0.0
1,523,427	+				-1.0
1,523,428	-				-2.0
1,523,428	-				-1.3
1,523,428	-				-0.8
1,523,428	-				-0.6
1,523,433	+				+2.0
1,523,433	+				-1.8
1,523,433	+				-2.0
1,523,433	+				-0.9
1,523,433	+				-0.8
1,523,433	+				-1.4
1,523,700	-		Psest_1415	0.23	-0.9
1,523,738	+		Psest_1415	0.25	-2.7
1,523,738	+		Psest_1415	0.25	-0.3
1,523,752	+		Psest_1415	0.26	+0.6
1,523,754	+		Psest_1415	0.26	-0.3
1,523,754	+		Psest_1415	0.26	-1.7
1,523,754	+		Psest_1415	0.26	-0.9
1,523,754	+		Psest_1415	0.26	-1.5
1,523,774	+		Psest_1415	0.27	-2.0
1,523,775	-		Psest_1415	0.27	-1.4
1,523,775	-		Psest_1415	0.27	-0.9
1,523,784	+		Psest_1415	0.28	-1.1
1,523,784	+		Psest_1415	0.28	-1.2
1,523,786	+		Psest_1415	0.28	+1.5
1,523,786	+		Psest_1415	0.28	+2.0
1,523,786	+		Psest_1415	0.28	+0.8
1,523,786	+		Psest_1415	0.28	-1.0
1,523,786	+		Psest_1415	0.28	-0.5
1,523,787	-		Psest_1415	0.28	-1.3
1,523,787	-		Psest_1415	0.28	+1.0
1,523,847	-		Psest_1415	0.32	-1.1
1,523,966	+		Psest_1415	0.38	-2.3
1,524,034	+		Psest_1415	0.42	-2.1
1,524,034	+		Psest_1415	0.42	+0.4
1,524,035	-		Psest_1415	0.42	-0.1
1,524,045	-		Psest_1415	0.43	-1.5
1,524,147	+		Psest_1415	0.49	+0.1
1,524,386	+		Psest_1415	0.62	-1.0
1,524,523	-		Psest_1415	0.70	-1.4
1,524,555	+		Psest_1415	0.72	-1.0
1,524,587	+		Psest_1415	0.74	-2.0
1,524,595	+		Psest_1415	0.74	-1.0
1,524,677	+		Psest_1415	0.79	-1.0
1,524,713	+		Psest_1415	0.81	+2.0
1,524,755	+		Psest_1415	0.83	-0.3
1,524,755	+		Psest_1415	0.83	-1.0
1,524,774	+		Psest_1415	0.84	+0.3
1,524,804	+		Psest_1415	0.86	-1.3
1,524,812	-		Psest_1415	0.87	-2.3
1,524,813	+		Psest_1415	0.87	-0.3
1,524,830	+		Psest_1415	0.88	+2.0
1,524,830	+		Psest_1415	0.88	+0.8
1,524,850	+		Psest_1415	0.89	-1.8
1,524,850	+		Psest_1415	0.89	-1.5
1,524,856	-		Psest_1415	0.89	+1.2
1,524,922	+				-0.3
1,524,922	+				-0.0
1,524,922	+				+0.9
1,524,978	+				+0.7
1,524,978	+				+1.4
1,524,978	+				-1.0
1,524,979	-				-3.8
1,524,999	+				-0.6
1,524,999	+				-0.7
1,524,999	+				+0.2
1,524,999	+				-1.1
1,525,000	-				-1.0
1,525,000	-				-1.0
1,525,000	-				+1.0
1,525,000	-				+1.0
1,525,000	-				-1.0
1,525,000	-				-2.5
1,525,108	+				+1.3
1,525,109	-				+0.0
1,525,109	-				-1.9
1,525,109	-				-0.5
1,525,427	+				-0.6
1,525,427	+				+0.5
1,525,428	-				+0.1
1,525,428	-				+3.6
1,525,428	-				-0.5
1,525,428	-				+0.2
1,525,502	+				+0.2
1,525,507	-				-0.5
1,525,507	-				-0.5