Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1407

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
1,513,729	-		Psest_1406	0.76	-0.6
1,513,787	+		Psest_1406	0.79	-0.5
1,514,006	+				+0.0
1,514,006	+				-0.7
1,514,006	+				+0.2
1,514,006	+				+2.0
1,514,006	+				+0.6
1,514,006	+				+0.2
1,514,006	+				-0.9
1,514,007	-				-2.0
1,514,007	-				-1.1
1,514,108	+				-0.7
1,514,108	+				-1.6
1,514,109	-				+1.2
1,514,179	+				+0.4
1,514,197	-				+1.0
1,514,197	-				+1.6
1,514,247	-				+2.3
1,514,342	-		Psest_1407	0.14	+0.0
1,514,371	+		Psest_1407	0.16	-1.2
1,514,371	+		Psest_1407	0.16	-0.1
1,514,372	-		Psest_1407	0.16	+1.5
1,514,372	-		Psest_1407	0.16	+1.6
1,514,372	-		Psest_1407	0.16	+0.5
1,514,372	-		Psest_1407	0.16	+1.0
1,514,372	-		Psest_1407	0.16	+1.8
1,514,372	-		Psest_1407	0.16	-0.1
1,514,424	+		Psest_1407	0.19	-0.1
1,514,425	-		Psest_1407	0.20	+2.0
1,514,425	-		Psest_1407	0.20	+1.7
1,514,458	+		Psest_1407	0.22	+1.3
1,514,458	+		Psest_1407	0.22	-0.6
1,514,458	+		Psest_1407	0.22	-1.1
1,514,459	-		Psest_1407	0.22	+2.5
1,514,459	-		Psest_1407	0.22	+0.9
1,514,519	-		Psest_1407	0.26	+2.4
1,514,560	-		Psest_1407	0.28	+1.0
1,514,565	+		Psest_1407	0.29	+0.6
1,514,764	+		Psest_1407	0.42	+1.7
1,514,930	-		Psest_1407	0.53	+2.7
1,514,968	+		Psest_1407	0.55	+1.5
1,515,031	+		Psest_1407	0.59	+2.6
1,515,032	-		Psest_1407	0.59	+2.4
1,515,369	+		Psest_1407	0.81	-0.8
1,515,369	+		Psest_1407	0.81	-0.1
1,515,369	+		Psest_1407	0.81	-0.2
1,515,370	-		Psest_1407	0.81	-0.1
1,515,370	-		Psest_1407	0.81	+0.4
1,515,370	-		Psest_1407	0.81	+0.2
1,515,370	-		Psest_1407	0.81	+2.0
1,515,448	+		Psest_1407	0.87	+1.0
1,515,448	+		Psest_1407	0.87	-0.3
1,515,448	+		Psest_1407	0.87	-0.3
1,515,448	+		Psest_1407	0.87	-0.4
1,515,449	-		Psest_1407	0.87	+1.5
1,515,525	-				+1.0
1,515,538	+				+0.2
1,515,538	+				-0.6
1,515,538	+				-1.3
1,515,538	+				+0.4
1,515,538	+				+0.6
1,515,538	+				-0.1
1,515,538	+				+0.7
1,515,538	+				-2.0
1,515,539	-				+0.5
1,515,539	-				-1.2
1,515,539	-				+0.2
1,515,539	-				-0.3
1,515,858	-				+1.8
1,515,858	-				+2.1
1,515,858	-				+5.0
1,515,858	-				+2.7
1,515,988	+				+1.2
1,515,988	+				+1.7
1,515,988	+				-0.2
1,515,988	+				+0.5
1,515,989	-				+1.9
1,515,989	-				+2.3
1,516,403	+		Psest_1408	0.24	+1.5
1,516,418	+		Psest_1408	0.25	+1.6
1,516,631	+		Psest_1408	0.42	-0.5
1,516,631	+		Psest_1408	0.42	+0.5
1,516,631	+		Psest_1408	0.42	+0.2
1,516,631	+		Psest_1408	0.42	+0.7
1,516,631	+		Psest_1408	0.42	+0.5
1,516,631	+		Psest_1408	0.42	+0.6
1,516,632	-		Psest_1408	0.42	+1.3
1,516,632	-		Psest_1408	0.42	+2.0
1,516,632	-		Psest_1408	0.42	+1.9
1,516,632	-		Psest_1408	0.42	+2.6