Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12490

Experiment: m.b. Sisomicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.005 mg/ml
1,296,119	-		PGA1_c12480	0.31	+0.7
1,296,129	-		PGA1_c12480	0.32	-1.2
1,296,129	-		PGA1_c12480	0.32	-0.7
1,296,136	-		PGA1_c12480	0.32	+0.3
1,296,138	+		PGA1_c12480	0.33	-1.5
1,296,173	+		PGA1_c12480	0.36	+0.3
1,296,244	-		PGA1_c12480	0.43	+0.1
1,296,272	-		PGA1_c12480	0.45	-0.8
1,296,286	-		PGA1_c12480	0.47	+0.2
1,296,321	+		PGA1_c12480	0.50	+0.1
1,296,343	+		PGA1_c12480	0.52	-0.6
1,296,481	+		PGA1_c12480	0.65	+0.3
1,296,567	+		PGA1_c12480	0.74	-0.5
1,296,645	+		PGA1_c12480	0.81	-0.0
1,296,700	+		PGA1_c12480	0.86	+0.6
1,296,700	+		PGA1_c12480	0.86	-0.4
1,296,806	-				+1.0
1,296,817	-				+1.5
1,296,839	+				+2.1
1,296,847	-				-2.5
1,296,861	-				-1.3
1,296,862	-				+1.1
1,296,864	+				+0.9
1,296,895	-				-0.3
1,296,933	+				+1.5
1,296,951	+				+0.4
1,297,034	-				-0.7
1,297,187	+		PGA1_c12490	0.15	-0.4
1,297,187	+		PGA1_c12490	0.15	+0.5
1,297,187	+		PGA1_c12490	0.15	+0.9
1,297,187	+		PGA1_c12490	0.15	+1.2
1,297,187	+		PGA1_c12490	0.15	+1.8
1,297,187	+		PGA1_c12490	0.15	-0.3
1,297,195	-		PGA1_c12490	0.15	+0.1
1,297,248	-		PGA1_c12490	0.19	-0.0
1,297,248	-		PGA1_c12490	0.19	+1.5
1,297,315	-		PGA1_c12490	0.25	+0.5
1,297,318	+		PGA1_c12490	0.25	+0.0
1,297,338	+		PGA1_c12490	0.27	+0.9
1,297,352	+		PGA1_c12490	0.28	+0.3
1,297,424	-		PGA1_c12490	0.33	+0.3
1,297,429	-		PGA1_c12490	0.34	-0.1
1,297,480	+		PGA1_c12490	0.38	+0.2
1,297,539	+		PGA1_c12490	0.43	+0.3
1,297,558	+		PGA1_c12490	0.44	-2.8
1,297,621	+		PGA1_c12490	0.49	+0.6
1,297,621	+		PGA1_c12490	0.49	-0.1
1,297,621	+		PGA1_c12490	0.49	+0.8
1,297,629	-		PGA1_c12490	0.50	+0.3
1,297,663	-		PGA1_c12490	0.53	+0.4
1,297,688	-		PGA1_c12490	0.55	+1.1
1,297,738	-		PGA1_c12490	0.59	+1.7
1,297,742	-		PGA1_c12490	0.59	+1.5
1,297,888	+		PGA1_c12490	0.71	+2.1
1,297,984	+		PGA1_c12490	0.78	+0.0
1,298,005	-		PGA1_c12490	0.80	+0.7
1,298,062	+		PGA1_c12490	0.84	+0.2
1,298,067	+		PGA1_c12490	0.85	+1.2
1,298,067	+		PGA1_c12490	0.85	+1.5
1,298,077	+		PGA1_c12490	0.86	+2.7
1,298,077	+		PGA1_c12490	0.86	+2.6
1,298,077	+		PGA1_c12490	0.86	-0.1
1,298,133	-				+1.2
1,298,133	-				+0.5
1,298,135	+				+0.2
1,298,135	+				+1.3
1,298,135	+				+2.0
1,298,135	+				+1.4
1,298,138	-				+1.4
1,298,143	-				+1.2
1,298,143	-				+1.3
1,298,165	+				+0.7
1,298,170	+				+0.5
1,298,173	-				+1.4
1,298,173	-				+0.6
1,298,239	-				+0.7
1,298,346	+				-0.2
1,298,354	+				+0.7
1,298,419	+				-0.5
1,298,427	-				+0.0
1,298,428	+				+0.2
1,298,436	-				-0.7
1,298,436	-				-2.1
1,298,477	+		PGA1_c12500	0.12	-0.2
1,298,477	+		PGA1_c12500	0.12	+0.6
1,298,485	-		PGA1_c12500	0.13	+0.7
1,298,485	-		PGA1_c12500	0.13	-0.4
1,298,553	-		PGA1_c12500	0.20	-0.4
1,298,593	-		PGA1_c12500	0.25	-0.1
1,298,600	-		PGA1_c12500	0.26	-0.1
1,298,616	+		PGA1_c12500	0.28	+0.5
1,298,616	+		PGA1_c12500	0.28	+0.3
1,298,621	+		PGA1_c12500	0.28	-0.7
1,298,621	+		PGA1_c12500	0.28	+0.1
1,298,639	-		PGA1_c12500	0.30	-0.9
1,298,675	-		PGA1_c12500	0.34	-0.3
1,298,705	+		PGA1_c12500	0.38	+1.6
1,298,728	+		PGA1_c12500	0.40	+0.8
1,298,743	+		PGA1_c12500	0.42	+1.0
1,298,760	+		PGA1_c12500	0.44	-2.2
1,298,852	+		PGA1_c12500	0.54	-0.5
1,298,863	+		PGA1_c12500	0.56	-1.4
1,298,957	-		PGA1_c12500	0.66	+0.3
1,298,969	+		PGA1_c12500	0.68	+0.8
1,298,977	+		PGA1_c12500	0.68	+0.3
1,299,033	+		PGA1_c12500	0.75	+1.1
1,299,038	+		PGA1_c12500	0.75	-0.2
1,299,045	+		PGA1_c12500	0.76	+0.3
1,299,046	-		PGA1_c12500	0.76	+0.5
1,299,101	+		PGA1_c12500	0.83	+0.8
1,299,109	-		PGA1_c12500	0.83	-1.4
1,299,151	+		PGA1_c12500	0.88	-0.6
1,299,173	+				+0.2
1,299,205	+				-1.3
1,299,242	+				+0.4
1,299,243	+				+1.2