Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1086

Experiment: Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.04 mg/ml
1,175,568	+		Psest_1085	0.61	+0.1
1,175,568	+		Psest_1085	0.61	-2.8
1,175,569	-		Psest_1085	0.61	+0.8
1,175,569	-		Psest_1085	0.61	-0.2
1,175,724	+		Psest_1085	0.76	-1.2
1,175,724	+		Psest_1085	0.76	+0.2
1,175,823	+		Psest_1085	0.86	-1.8
1,175,823	+		Psest_1085	0.86	-0.2
1,175,823	+		Psest_1085	0.86	-0.9
1,175,950	-				-1.7
1,175,950	-				-1.2
1,176,071	-				+0.1
1,176,144	+				+1.0
1,176,144	+				+2.5
1,176,144	+				+0.8
1,176,144	+				-2.7
1,176,144	+				-1.4
1,176,144	+				-1.4
1,176,144	+				+0.8
1,176,144	+				-0.4
1,176,144	+				-2.7
1,176,144	+				-1.2
1,176,145	-				-0.5
1,176,145	-				+1.7
1,176,145	-				-0.7
1,176,154	+				+0.4
1,176,154	+				-0.2
1,176,155	-				-1.5
1,176,158	+				-0.3
1,176,158	+				-0.9
1,176,159	-				-1.5
1,176,164	+				-0.1
1,176,164	+				-2.0
1,176,175	-				-1.3
1,176,185	+				-0.4
1,176,185	+				+0.2
1,176,185	+				+0.4
1,176,186	-				+0.1
1,176,186	-				-0.4
1,176,230	+				+1.1
1,176,239	+				+0.1
1,176,239	+				-1.0
1,176,239	+				+0.1
1,176,239	+				-0.5
1,176,239	+				-0.2
1,176,240	-				-1.6
1,176,240	-				-2.6
1,176,240	-				+0.1
1,176,240	-				-0.1
1,176,240	-				+0.5
1,176,240	-				-2.7
1,176,274	+				-0.2
1,176,274	+				-0.3
1,176,274	+				-0.0
1,176,275	-				-0.7
1,176,275	-				+0.5
1,176,275	-				-0.4
1,176,275	-				-1.7
1,176,275	-				-0.3
1,176,277	-				-0.6
1,176,394	+				-0.2
1,176,394	+				+0.1
1,176,395	-				-0.9
1,176,589	+		Psest_1086	0.20	-0.3
1,176,720	+		Psest_1086	0.27	-0.3
1,176,880	+		Psest_1086	0.37	-0.8
1,176,881	-		Psest_1086	0.37	+0.2
1,176,881	-		Psest_1086	0.37	+1.2
1,176,881	-		Psest_1086	0.37	+1.4
1,176,881	-		Psest_1086	0.37	+1.5
1,176,881	-		Psest_1086	0.37	+0.6
1,176,881	-		Psest_1086	0.37	+0.7
1,176,881	-		Psest_1086	0.37	+1.7
1,176,928	+		Psest_1086	0.40	+0.5
1,176,928	+		Psest_1086	0.40	+0.3
1,176,929	-		Psest_1086	0.40	+1.1
1,176,929	-		Psest_1086	0.40	+1.1
1,176,929	-		Psest_1086	0.40	+0.3
1,176,949	+		Psest_1086	0.41	+0.0
1,176,949	+		Psest_1086	0.41	+0.1
1,176,949	+		Psest_1086	0.41	-1.4
1,176,950	-		Psest_1086	0.41	+0.5
1,177,012	+		Psest_1086	0.45	-0.1
1,177,012	+		Psest_1086	0.45	+0.3
1,177,144	+		Psest_1086	0.53	-0.7
1,177,144	+		Psest_1086	0.53	-1.6
1,177,144	+		Psest_1086	0.53	-0.1
1,177,144	+		Psest_1086	0.53	-0.0
1,177,144	+		Psest_1086	0.53	-0.2
1,177,144	+		Psest_1086	0.53	-0.7
1,177,144	+		Psest_1086	0.53	+1.3
1,177,144	+		Psest_1086	0.53	-1.4
1,177,144	+		Psest_1086	0.53	+0.7
1,177,144	+		Psest_1086	0.53	+0.2
1,177,144	+		Psest_1086	0.53	+0.6
1,177,144	+		Psest_1086	0.53	-0.0
1,177,144	+		Psest_1086	0.53	-2.9
1,177,144	+		Psest_1086	0.53	+1.1
1,177,144	+		Psest_1086	0.53	-0.3
1,177,144	+		Psest_1086	0.53	+1.1
1,177,145	-		Psest_1086	0.53	+2.1
1,177,145	-		Psest_1086	0.53	+1.5
1,177,145	-		Psest_1086	0.53	-0.2
1,177,145	-		Psest_1086	0.53	-1.0
1,177,145	-		Psest_1086	0.53	+1.1
1,177,145	-		Psest_1086	0.53	+1.2
1,177,145	-		Psest_1086	0.53	+1.8
1,177,307	-		Psest_1086	0.62	+0.9
1,177,585	+		Psest_1086	0.79	-0.5
1,177,585	+		Psest_1086	0.79	-1.8
1,177,585	+		Psest_1086	0.79	-0.1
1,177,586	-		Psest_1086	0.79	-0.2
1,177,586	-		Psest_1086	0.79	+1.6
1,177,586	-		Psest_1086	0.79	+0.9
1,177,586	-		Psest_1086	0.79	-0.3
1,178,010	+				-1.2
1,178,011	-				+1.5
1,178,051	+				-1.0
1,178,051	+				+0.2
1,178,174	-		Psest_1087	0.29	-1.5
1,178,348	-		Psest_1087	0.58	+0.8
1,178,566	+				+0.3
1,178,567	-				+0.3
1,178,567	-				+1.5
1,178,635	-				-1.8
1,178,706	+				+2.1
1,178,706	+				+1.1
1,178,707	-				+0.5
1,178,707	-				+0.4
1,178,707	-				+1.8
1,178,836	+		Psest_1088	0.10	+0.9
1,178,836	+		Psest_1088	0.10	+1.0
1,178,836	+		Psest_1088	0.10	-1.0
1,178,836	+		Psest_1088	0.10	+0.9
1,178,836	+		Psest_1088	0.10	-0.6
1,178,836	+		Psest_1088	0.10	-0.3
1,178,836	+		Psest_1088	0.10	+0.2
1,178,837	-		Psest_1088	0.10	+0.5
1,178,837	-		Psest_1088	0.10	-0.2
1,178,837	-		Psest_1088	0.10	+0.5
1,178,837	-		Psest_1088	0.10	+0.7
1,178,838	+		Psest_1088	0.10	+0.5
1,178,839	-		Psest_1088	0.10	-0.2