Strain Fitness in Shewanella amazonensis SB2B around Sama_2926

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,479,876	+		Sama_2924	0.83	-0.2
3,479,876	+		Sama_2924	0.83	-0.1
3,479,877	-		Sama_2924	0.83	-1.1
3,479,889	+		Sama_2924	0.84	-2.5
3,479,889	+		Sama_2924	0.84	+0.7
3,479,889	+		Sama_2924	0.84	-0.7
3,479,889	+		Sama_2924	0.84	-0.3
3,480,164	+				+0.2
3,480,165	-				-0.1
3,480,178	+				+0.7
3,480,179	-				-1.8
3,480,179	-				-0.7
3,480,181	+				-0.6
3,480,182	-				+0.2
3,480,184	+				-0.6
3,480,184	+				-2.5
3,480,196	+				+0.4
3,480,196	+				+0.2
3,480,196	+				-0.1
3,480,196	+				+0.2
3,480,196	+				+0.2
3,480,196	+				-0.6
3,480,197	-				-0.3
3,480,198	+				-1.0
3,480,198	+				-0.1
3,480,198	+				+0.7
3,480,198	+				-1.1
3,480,198	+				-0.1
3,480,198	+				-0.9
3,480,198	+				+0.3
3,480,199	-				+0.3
3,480,199	-				+0.3
3,480,199	-				-0.9
3,480,207	+				-0.5
3,480,207	+				+0.0
3,480,207	+				+0.2
3,480,207	+				-0.6
3,480,207	+				-2.3
3,480,207	+				+2.0
3,480,207	+				-1.6
3,480,208	-				-1.6
3,480,208	-				+0.1
3,480,208	-				-1.3
3,480,208	-				-1.8
3,480,208	-				-0.3
3,480,208	-				+1.3
3,480,208	-				-1.5
3,480,239	+				+0.3
3,480,240	-				-1.3
3,480,242	+				+1.3
3,480,243	-				+0.4
3,480,243	-				-0.3
3,480,268	-				-1.8
3,480,317	+				+0.5
3,480,317	+				-1.6
3,480,317	+				-0.0
3,480,317	+				-1.0
3,480,317	+				-2.9
3,480,317	+				+0.2
3,480,317	+				-0.1
3,480,376	+				+0.2
3,480,376	+				-0.6
3,480,376	+				-0.6
3,480,376	+				+0.1
3,480,377	-				-0.1
3,480,377	-				+0.3
3,480,385	+				-1.0
3,480,489	+		Sama_2925	0.27	+0.3
3,480,490	-		Sama_2925	0.27	-1.1
3,480,490	-		Sama_2925	0.27	+0.1
3,480,509	+		Sama_2925	0.31	-0.9
3,480,509	+		Sama_2925	0.31	+0.1
3,480,510	-		Sama_2925	0.32	+0.6
3,480,510	-		Sama_2925	0.32	-0.4
3,480,510	-		Sama_2925	0.32	+0.3
3,480,569	+		Sama_2925	0.46	-0.9
3,480,569	+		Sama_2925	0.46	-1.8
3,480,569	+		Sama_2925	0.46	+0.2
3,480,569	+		Sama_2925	0.46	+2.0
3,480,569	+		Sama_2925	0.46	-0.4
3,480,569	+		Sama_2925	0.46	-1.0
3,480,569	+		Sama_2925	0.46	+1.7
3,480,569	+		Sama_2925	0.46	-1.0
3,480,569	+		Sama_2925	0.46	+0.8
3,480,570	-		Sama_2925	0.46	-0.2
3,480,570	-		Sama_2925	0.46	-0.7
3,480,605	+		Sama_2925	0.54	+1.2
3,480,605	+		Sama_2925	0.54	-0.5
3,480,605	+		Sama_2925	0.54	+1.2
3,480,606	-		Sama_2925	0.55	-0.2
3,480,628	+		Sama_2925	0.60	+0.6
3,480,629	-		Sama_2925	0.60	-0.2
3,480,629	-		Sama_2925	0.60	+1.1
3,480,680	+		Sama_2925	0.72	-1.0
3,480,681	-		Sama_2925	0.72	+0.3
3,480,681	-		Sama_2925	0.72	-0.5
3,480,685	+		Sama_2925	0.73	-0.3
3,480,686	-		Sama_2925	0.74	+1.7
3,480,686	-		Sama_2925	0.74	+0.5
3,480,686	-		Sama_2925	0.74	-1.8
3,480,686	-		Sama_2925	0.74	+1.0
3,480,735	+		Sama_2925	0.85	+0.4
3,480,735	+		Sama_2925	0.85	-0.4
3,480,744	+		Sama_2925	0.87	-0.8
3,480,744	+		Sama_2925	0.87	-0.4
3,480,745	-		Sama_2925	0.88	+1.2
3,480,745	-		Sama_2925	0.88	+0.8
3,480,745	-		Sama_2925	0.88	+0.4
3,480,745	-		Sama_2925	0.88	-0.6
3,480,846	+				-1.2
3,480,846	+				-0.1
3,480,848	+				-1.2
3,481,017	-		Sama_2926	0.25	-0.1
3,481,055	-		Sama_2926	0.30	-0.2
3,481,055	-		Sama_2926	0.30	+0.2
3,481,161	-		Sama_2926	0.46	-0.8
3,481,161	-		Sama_2926	0.46	-1.5
3,481,297	-		Sama_2926	0.66	+0.1
3,481,356	+		Sama_2926	0.74	-1.6
3,481,365	+		Sama_2926	0.75	-1.7
3,481,366	-		Sama_2926	0.76	-1.2
3,481,366	-		Sama_2926	0.76	-1.7
3,481,366	-		Sama_2926	0.76	-0.5
3,481,406	-		Sama_2926	0.81	-1.9
3,481,406	-		Sama_2926	0.81	-0.3
3,481,412	+		Sama_2926	0.82	+1.0
3,481,447	-		Sama_2926	0.87	-2.0
3,481,447	-		Sama_2926	0.87	-1.1
3,481,447	-		Sama_2926	0.87	-0.8
3,481,461	+		Sama_2926	0.89	-1.8
3,481,461	+		Sama_2926	0.89	-0.5
3,481,461	+		Sama_2926	0.89	+0.2
3,481,482	+				+0.7
3,481,502	+				-1.0
3,481,503	-				-0.3
3,481,503	-				-0.2
3,481,503	-				+0.4
3,481,526	-				-0.5
3,481,526	-				-0.9
3,481,535	+				-2.0
3,481,535	+				+0.5
3,481,536	-				-0.9
3,481,536	-				-1.7
3,481,536	-				-0.2
3,481,536	-				-0.0
3,481,581	+		Sama_2927	0.11	-0.6
3,481,581	+		Sama_2927	0.11	+0.0
3,481,581	+		Sama_2927	0.11	-1.3
3,481,582	-		Sama_2927	0.11	+0.2
3,481,582	-		Sama_2927	0.11	+0.4
3,481,665	-		Sama_2927	0.30	-0.2
3,481,665	-		Sama_2927	0.30	-0.8
3,481,685	+		Sama_2927	0.35	+0.2
3,481,685	+		Sama_2927	0.35	+0.8
3,481,699	+		Sama_2927	0.38	-0.4
3,481,699	+		Sama_2927	0.38	+0.0
3,481,699	+		Sama_2927	0.38	-2.1
3,481,699	+		Sama_2927	0.38	-0.2
3,481,700	-		Sama_2927	0.38	+0.1
3,481,700	-		Sama_2927	0.38	-1.0
3,481,700	-		Sama_2927	0.38	-0.5
3,481,700	-		Sama_2927	0.38	-0.2
3,481,782	+		Sama_2927	0.57	+0.2
3,481,782	+		Sama_2927	0.57	+1.8
3,481,782	+		Sama_2927	0.57	+0.3
3,481,783	-		Sama_2927	0.58	-1.4
3,481,783	-		Sama_2927	0.58	+1.6
3,481,783	-		Sama_2927	0.58	+0.0
3,481,805	-		Sama_2927	0.63	+1.7
3,481,848	-		Sama_2927	0.73	-0.8
3,481,972	+				+0.5
3,481,972	+				+0.4
3,481,982	-				+1.1
3,481,982	-				+1.7
3,481,998	+				+0.5
3,481,999	-				-1.6
3,481,999	-				+1.0
3,481,999	-				+2.0
3,481,999	-				+0.6
3,482,003	+				-1.5
3,482,003	+				-0.3
3,482,003	+				+0.8
3,482,004	-				+0.6
3,482,036	+				-0.2
3,482,046	+				+0.1
3,482,046	+				-1.1
3,482,047	-				-0.3
3,482,053	-				-0.6
3,482,090	+				+0.8
3,482,090	+				-0.8
3,482,090	+				+0.7
3,482,090	+				+1.4
3,482,090	+				-0.3
3,482,091	-				+0.2
3,482,091	-				+0.0
3,482,091	-				-1.4
3,482,096	-				-0.9
3,482,175	+		Sama_2928	0.12	-0.1
3,482,175	+		Sama_2928	0.12	+1.2
3,482,175	+		Sama_2928	0.12	-0.7
3,482,176	-		Sama_2928	0.12	+0.3
3,482,238	+		Sama_2928	0.19	-0.8
3,482,239	-		Sama_2928	0.19	-0.2
3,482,239	-		Sama_2928	0.19	+0.8
3,482,267	+		Sama_2928	0.22	-0.6
3,482,267	+		Sama_2928	0.22	+2.6
3,482,267	+		Sama_2928	0.22	-0.3
3,482,268	-		Sama_2928	0.22	-2.0
3,482,423	+		Sama_2928	0.40	-0.3
3,482,423	+		Sama_2928	0.40	+0.1
3,482,424	-		Sama_2928	0.40	+1.0
3,482,437	+		Sama_2928	0.41	-0.1
3,482,438	-		Sama_2928	0.41	-0.4
3,482,438	-		Sama_2928	0.41	-0.9
3,482,438	-		Sama_2928	0.41	+0.3