Strain Fitness in Shewanella amazonensis SB2B around Sama_2733

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,265,611	+		Sama_2731	0.72	+0.3
3,265,611	+		Sama_2731	0.72	-0.9
3,265,739	-		Sama_2731	0.88	+0.9
3,265,745	+		Sama_2731	0.89	-0.9
3,265,749	+		Sama_2731	0.89	-1.3
3,265,750	-		Sama_2731	0.89	-0.3
3,265,750	-		Sama_2731	0.89	+0.8
3,265,750	-		Sama_2731	0.89	+0.7
3,265,750	-		Sama_2731	0.89	-1.7
3,265,757	+				+1.4
3,265,757	+				+0.9
3,265,806	+				+0.5
3,265,806	+				-0.3
3,265,806	+				+0.5
3,265,806	+				+0.3
3,265,807	-				+0.9
3,265,807	-				-0.1
3,265,812	+				+0.3
3,265,812	+				-0.4
3,265,812	+				-1.7
3,265,832	+				+1.7
3,265,833	-				+0.9
3,265,833	-				-0.6
3,265,833	-				+0.1
3,265,842	-				-1.3
3,265,860	+				-0.9
3,265,861	-				-0.8
3,265,877	-				+0.2
3,265,877	-				+0.6
3,265,906	-				+0.9
3,265,909	+				+0.7
3,265,909	+				+0.9
3,265,910	-				+1.2
3,265,940	+				+0.0
3,265,941	-				+0.3
3,265,970	-				-0.3
3,265,970	-				-0.3
3,265,970	-				-0.5
3,265,980	+				+0.6
3,265,980	+				-1.6
3,265,980	+				-0.1
3,265,981	-				+1.7
3,265,981	-				-0.5
3,266,011	+				+0.7
3,266,011	+				-1.8
3,266,012	-				+0.6
3,266,067	+		Sama_2732	0.15	-0.1
3,266,068	-		Sama_2732	0.15	+1.0
3,266,068	-		Sama_2732	0.15	+0.6
3,266,072	+		Sama_2732	0.16	-0.9
3,266,072	+		Sama_2732	0.16	-0.3
3,266,072	+		Sama_2732	0.16	+0.3
3,266,073	-		Sama_2732	0.16	-0.5
3,266,107	+		Sama_2732	0.22	+2.2
3,266,107	+		Sama_2732	0.22	-2.7
3,266,107	+		Sama_2732	0.22	+1.9
3,266,108	-		Sama_2732	0.22	-0.1
3,266,315	-		Sama_2732	0.58	-0.0
3,266,315	-		Sama_2732	0.58	+0.6
3,266,398	-		Sama_2732	0.73	+0.6
3,266,441	-		Sama_2732	0.81	+0.2
3,266,441	-		Sama_2732	0.81	-0.5
3,266,441	-		Sama_2732	0.81	-2.1
3,266,460	+		Sama_2732	0.84	-0.1
3,266,460	+		Sama_2732	0.84	+1.4
3,266,461	-		Sama_2732	0.84	+0.7
3,266,486	-		Sama_2732	0.88	-0.4
3,266,486	-		Sama_2732	0.88	-1.3
3,266,531	+				+0.4
3,266,534	+				-0.4
3,266,534	+				-0.4
3,266,535	-				+0.6
3,266,542	+				+0.3
3,266,543	-				-1.1
3,266,543	-				-0.1
3,266,557	+				-0.3
3,266,588	+				-1.9
3,266,588	+				+1.9
3,266,588	+				-1.1
3,266,589	-				+0.8
3,266,601	+				+0.6
3,266,601	+				-1.9
3,266,602	-				-0.4
3,266,602	-				+0.3
3,266,621	+				+0.3
3,266,689	+		Sama_2733	0.25	+0.0
3,266,689	+		Sama_2733	0.25	-0.6
3,266,689	+		Sama_2733	0.25	+2.1
3,266,689	+		Sama_2733	0.25	-0.5
3,266,690	-		Sama_2733	0.25	-1.0
3,266,690	-		Sama_2733	0.25	+0.1
3,266,721	+		Sama_2733	0.33	+0.7
3,266,721	+		Sama_2733	0.33	-0.7
3,266,722	-		Sama_2733	0.33	+0.2
3,266,722	-		Sama_2733	0.33	-1.3
3,266,743	+		Sama_2733	0.38	+0.6
3,266,744	-		Sama_2733	0.38	-1.4
3,266,744	-		Sama_2733	0.38	-0.3
3,266,763	+		Sama_2733	0.43	+0.2
3,266,807	-		Sama_2733	0.54	+0.1
3,266,865	-		Sama_2733	0.68	+0.1
3,266,902	+		Sama_2733	0.77	-0.6
3,266,902	+		Sama_2733	0.77	+0.0
3,266,902	+		Sama_2733	0.77	+0.2
3,266,902	+		Sama_2733	0.77	-1.1
3,266,902	+		Sama_2733	0.77	-1.8
3,266,903	-		Sama_2733	0.77	+0.4
3,266,903	-		Sama_2733	0.77	+0.3
3,266,940	+		Sama_2733	0.87	-0.3
3,266,940	+		Sama_2733	0.87	-0.9
3,266,940	+		Sama_2733	0.87	-0.5
3,266,940	+		Sama_2733	0.87	+1.2
3,266,940	+		Sama_2733	0.87	+1.2
3,266,940	+		Sama_2733	0.87	+0.7
3,266,940	+		Sama_2733	0.87	-0.7
3,266,940	+		Sama_2733	0.87	-0.0
3,266,941	-		Sama_2733	0.87	-1.3
3,266,941	-		Sama_2733	0.87	+0.1
3,266,941	-		Sama_2733	0.87	+0.5
3,266,950	-		Sama_2733	0.89	-0.2
3,266,968	+				-0.4
3,266,968	+				-0.5
3,266,968	+				+1.5
3,266,968	+				-0.5
3,266,968	+				-1.5
3,266,968	+				-0.3
3,266,968	+				-1.1
3,266,968	+				+0.4
3,266,968	+				-2.3
3,266,968	+				-0.1
3,266,968	+				-1.0
3,266,968	+				+0.2
3,266,968	+				+0.1
3,266,968	+				+1.7
3,266,969	-				-0.9
3,266,969	-				+0.6
3,266,969	-				-0.1
3,266,969	-				+1.2
3,266,969	-				-0.1
3,266,969	-				+0.7
3,266,969	-				-1.4
3,266,969	-				+0.2
3,266,969	-				+0.9
3,266,969	-				-1.4
3,266,969	-				+1.2
3,266,969	-				-0.8
3,266,969	-				-1.2
3,266,969	-				-0.3
3,266,969	-				-1.0
3,266,969	-				-0.1
3,266,969	-				+0.3
3,266,970	+				+0.9
3,266,970	+				-1.3
3,266,970	+				-2.8
3,266,970	+				-1.3
3,266,971	-				-1.5
3,266,971	-				-1.0
3,266,971	-				-0.1
3,266,971	-				-0.4
3,266,971	-				+0.9
3,266,971	-				-0.1
3,266,971	-				+0.3
3,266,972	+				-0.6
3,266,972	+				-2.2
3,266,972	+				+0.2
3,266,972	+				-0.5
3,266,972	+				-0.1
3,266,972	+				+1.6
3,266,972	+				+0.1
3,266,972	+				-0.7
3,266,972	+				-0.7
3,266,972	+				+0.8
3,266,972	+				-0.1
3,266,972	+				-1.5
3,266,972	+				-1.0
3,266,972	+				+0.7
3,266,972	+				-0.5
3,266,972	+				-1.4
3,266,972	+				+1.2
3,266,972	+				-0.6
3,266,972	+				-0.9
3,266,972	+				+0.3
3,266,972	+				+0.0
3,266,972	+				+0.6
3,266,973	-				-0.3
3,266,973	-				+0.3
3,266,973	-				+0.4
3,266,973	-				-1.5
3,266,973	-				+0.7
3,266,973	-				-2.5
3,266,973	-				+1.9
3,266,973	-				-0.9
3,266,973	-				+0.2
3,266,973	-				+0.4
3,266,973	-				+0.1
3,266,973	-				-0.6
3,266,973	-				-0.8
3,266,973	-				+1.1
3,266,973	-				+0.9
3,266,973	-				+0.4
3,266,973	-				+1.0
3,266,973	-				-0.8
3,266,973	-				+0.3
3,266,973	-				-0.6
3,266,973	-				-0.4
3,266,973	-				-0.7
3,266,973	-				-0.1
3,266,973	-				+0.2
3,267,124	+				+0.0
3,267,233	+		Sama_2734	0.20	-0.4
3,267,234	-		Sama_2734	0.20	+0.3
3,267,234	-		Sama_2734	0.20	+0.5
3,267,313	+		Sama_2734	0.28	+0.3
3,267,314	-		Sama_2734	0.28	-0.5
3,267,345	+		Sama_2734	0.31	+0.7
3,267,345	+		Sama_2734	0.31	+0.9
3,267,345	+		Sama_2734	0.31	-0.9
3,267,345	+		Sama_2734	0.31	-0.7
3,267,346	-		Sama_2734	0.31	-0.7
3,267,346	-		Sama_2734	0.31	-1.2
3,267,346	-		Sama_2734	0.31	+0.6
3,267,352	+		Sama_2734	0.32	-1.3
3,267,449	-		Sama_2734	0.41	+0.2
3,267,548	+		Sama_2734	0.50	+0.7
3,267,548	+		Sama_2734	0.50	+0.5
3,267,548	+		Sama_2734	0.50	-0.1
3,267,614	+		Sama_2734	0.57	-1.1
3,267,614	+		Sama_2734	0.57	-0.6
3,267,615	-		Sama_2734	0.57	-0.4
3,267,635	+		Sama_2734	0.59	-1.2
3,267,647	+		Sama_2734	0.60	+0.9
3,267,647	+		Sama_2734	0.60	+1.1
3,267,704	+		Sama_2734	0.65	-0.1
3,267,705	-		Sama_2734	0.65	+0.7
3,267,789	+		Sama_2734	0.73	+0.4
3,267,789	+		Sama_2734	0.73	+0.8
3,267,789	+		Sama_2734	0.73	+1.9
3,267,789	+		Sama_2734	0.73	+0.8
3,267,790	-		Sama_2734	0.74	-0.2
3,267,790	-		Sama_2734	0.74	-0.8
3,267,790	-		Sama_2734	0.74	+2.1
3,267,790	-		Sama_2734	0.74	-1.0
3,267,790	-		Sama_2734	0.74	-1.5
3,267,834	+		Sama_2734	0.78	-3.3
3,267,868	+		Sama_2734	0.81	-0.9
3,267,869	-		Sama_2734	0.81	+1.2