Strain Fitness in Shewanella amazonensis SB2B around Sama_2673

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,198,117	+		Sama_2672	0.62	-0.1
3,198,118	-		Sama_2672	0.62	-0.3
3,198,118	-		Sama_2672	0.62	-0.7
3,198,118	-		Sama_2672	0.62	-1.4
3,198,118	-		Sama_2672	0.62	-0.6
3,198,121	+		Sama_2672	0.62	+0.0
3,198,122	-		Sama_2672	0.62	-0.4
3,198,325	-		Sama_2672	0.76	-1.6
3,198,405	+		Sama_2672	0.81	-0.8
3,198,406	-		Sama_2672	0.81	+0.0
3,198,406	-		Sama_2672	0.81	-1.8
3,198,418	-		Sama_2672	0.82	+0.2
3,198,426	+		Sama_2672	0.83	-1.9
3,198,426	+		Sama_2672	0.83	-2.0
3,198,426	+		Sama_2672	0.83	+0.2
3,198,426	+		Sama_2672	0.83	-0.1
3,198,427	-		Sama_2672	0.83	-0.1
3,198,427	-		Sama_2672	0.83	+1.0
3,198,428	+		Sama_2672	0.83	-1.2
3,198,428	+		Sama_2672	0.83	-0.1
3,198,429	-		Sama_2672	0.83	+0.6
3,198,429	-		Sama_2672	0.83	-1.8
3,198,477	+		Sama_2672	0.86	-0.4
3,198,478	-		Sama_2672	0.86	-1.9
3,198,478	-		Sama_2672	0.86	-0.7
3,198,508	+		Sama_2672	0.88	+0.2
3,198,508	+		Sama_2672	0.88	+0.5
3,198,509	-		Sama_2672	0.88	+1.3
3,198,552	+				+1.0
3,198,560	+				+0.6
3,198,591	+				-0.6
3,198,610	-				-0.5
3,198,637	-				-1.4
3,198,637	-				+0.3
3,198,637	-				+0.0
3,198,637	-				-0.8
3,198,639	-				-0.1
3,198,667	+				-0.7
3,198,737	-				+0.2
3,198,737	-				+0.9
3,198,737	-				-1.3
3,198,737	-				-1.7
3,198,744	+				-0.7
3,198,745	-				+0.3
3,198,745	-				+0.1
3,198,745	-				+0.9
3,198,745	-				+0.6
3,198,745	-				-0.2
3,198,766	+				-1.4
3,198,767	-				-1.4
3,198,786	-				-0.8
3,198,791	-				-0.4
3,198,800	+				+1.7
3,198,801	-				-0.1
3,198,803	+				-0.1
3,198,803	+				-0.9
3,198,804	-				-0.4
3,198,805	+				-1.1
3,198,805	+				+0.7
3,198,805	+				+0.1
3,198,826	+				-0.2
3,198,896	+				-1.6
3,199,232	+		Sama_2673	0.47	-1.6
3,199,282	+		Sama_2673	0.54	-0.9
3,199,282	+		Sama_2673	0.54	-0.6
3,199,326	+		Sama_2673	0.61	-1.3
3,199,448	+		Sama_2673	0.79	-1.8
3,199,509	+		Sama_2673	0.88	+0.1