Strain Fitness in Shewanella amazonensis SB2B around Sama_2045

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,480,587	-		Sama_2044	0.10	+1.2
2,480,651	-		Sama_2044	0.17	-0.1
2,480,798	-		Sama_2044	0.32	+2.9
2,480,950	-		Sama_2044	0.48	-2.4
2,480,992	-		Sama_2044	0.52	-0.8
2,480,998	-		Sama_2044	0.53	-0.4
2,481,110	-		Sama_2044	0.64	-0.0
2,481,461	-				+1.0
2,481,559	-				+1.1
2,481,631	-		Sama_2045	0.15	-1.4
2,481,631	-		Sama_2045	0.15	-2.5
2,481,631	-		Sama_2045	0.15	-0.8
2,481,732	-		Sama_2045	0.27	+0.7
2,481,732	-		Sama_2045	0.27	+2.1
2,481,732	-		Sama_2045	0.27	-0.3
2,481,732	-		Sama_2045	0.27	-0.0
2,481,788	-		Sama_2045	0.33	-1.0
2,481,788	-		Sama_2045	0.33	-1.4
2,481,949	-		Sama_2045	0.51	-1.3
2,481,949	-		Sama_2045	0.51	-0.0
2,482,029	-		Sama_2045	0.60	-1.9
2,482,057	-		Sama_2045	0.63	+0.6
2,482,120	-		Sama_2045	0.70	-0.1
2,482,120	-		Sama_2045	0.70	-0.2
2,482,127	-		Sama_2045	0.71	-0.2
2,482,127	-		Sama_2045	0.71	+0.6
2,482,184	-		Sama_2045	0.78	-0.4
2,482,357	-				-0.4
2,482,442	-				+0.3
2,482,442	-				-1.0
2,482,466	-	dcd	Sama_2046	0.13	+1.1
2,482,513	-	dcd	Sama_2046	0.21	-0.8
2,483,001	-				+0.1
2,483,031	-				-1.5
2,483,031	-				-1.9
2,483,096	-		Sama_2047	0.14	+0.2
2,483,096	-		Sama_2047	0.14	+0.2
2,483,115	-		Sama_2047	0.17	+0.1
2,483,137	-		Sama_2047	0.20	+1.3
2,483,175	-		Sama_2047	0.26	-1.0
2,483,175	-		Sama_2047	0.26	+0.9
2,483,235	-		Sama_2047	0.36	-1.4
2,483,241	-		Sama_2047	0.37	-0.7
2,483,352	-		Sama_2047	0.54	-0.4
2,483,363	-		Sama_2047	0.56	+1.0
2,483,363	-		Sama_2047	0.56	-1.6
2,483,363	-		Sama_2047	0.56	-0.0
2,483,363	-		Sama_2047	0.56	+0.1
2,483,363	-		Sama_2047	0.56	+0.2
2,483,369	-		Sama_2047	0.57	-0.1
2,483,369	-		Sama_2047	0.57	-0.3