Strain Fitness in Shewanella amazonensis SB2B around Sama_1975

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,402,667	-				+0.3
2,402,776	+		Sama_1974	0.12	-0.3
2,402,866	+		Sama_1974	0.22	-1.8
2,402,871	-		Sama_1974	0.23	-0.9
2,402,871	-		Sama_1974	0.23	+0.2
2,402,877	+		Sama_1974	0.24	+1.5
2,402,877	+		Sama_1974	0.24	+0.3
2,403,001	+		Sama_1974	0.37	-0.8
2,403,031	+		Sama_1974	0.41	+1.3
2,403,032	-		Sama_1974	0.41	+1.1
2,403,068	+		Sama_1974	0.45	-0.3
2,403,141	+		Sama_1974	0.53	-1.1
2,403,142	-		Sama_1974	0.53	+1.3
2,403,150	+		Sama_1974	0.54	+1.5
2,403,180	-		Sama_1974	0.58	-1.4
2,403,273	+		Sama_1974	0.68	-0.1
2,403,365	+		Sama_1974	0.78	-0.1
2,403,567	+				-0.8
2,403,567	+				-2.3
2,403,567	+				+0.5
2,403,568	-				+0.5
2,403,568	-				+1.5
2,403,623	-				-0.1
2,403,633	+				+0.5
2,403,650	-				+0.2
2,403,831	-		Sama_1975	0.20	-0.1
2,403,872	-		Sama_1975	0.24	-0.2
2,403,872	-		Sama_1975	0.24	-2.5
2,403,872	-		Sama_1975	0.24	-1.1
2,403,874	-		Sama_1975	0.25	-0.1
2,403,874	-		Sama_1975	0.25	+0.2
2,404,001	-		Sama_1975	0.39	-2.5
2,404,091	+		Sama_1975	0.49	-1.3
2,404,092	-		Sama_1975	0.49	-1.1
2,404,308	-		Sama_1975	0.74	-0.6
2,404,445	-		Sama_1975	0.90	-0.1
2,404,446	+		Sama_1975	0.90	-0.5
2,404,446	+		Sama_1975	0.90	+0.5
2,404,447	-				+0.8
2,404,447	-				-1.3
2,404,447	-				+0.9
2,404,447	-				-0.8
2,404,447	-				-0.9
2,404,447	-				+0.7
2,404,570	+				-1.9
2,404,571	-				+0.5
2,404,584	-				-0.7
2,404,584	-				-0.6
2,404,707	+				-1.4
2,404,852	+		Sama_1976	0.19	+0.3
2,404,859	+		Sama_1976	0.19	+0.3
2,404,860	-		Sama_1976	0.20	+0.6
2,404,877	-		Sama_1976	0.21	+0.3
2,404,877	-		Sama_1976	0.21	-0.2
2,404,877	-		Sama_1976	0.21	-0.3
2,404,877	-		Sama_1976	0.21	+0.2
2,404,979	+		Sama_1976	0.27	+0.4
2,405,008	+		Sama_1976	0.29	+0.1
2,405,009	-		Sama_1976	0.29	-0.6
2,405,085	+		Sama_1976	0.34	+0.2
2,405,086	-		Sama_1976	0.34	+0.0
2,405,086	-		Sama_1976	0.34	+0.5
2,405,086	-		Sama_1976	0.34	-0.8
2,405,086	-		Sama_1976	0.34	-2.1
2,405,086	-		Sama_1976	0.34	+0.8
2,405,198	-		Sama_1976	0.42	-0.5
2,405,272	+		Sama_1976	0.46	+1.0
2,405,273	-		Sama_1976	0.46	-0.1
2,405,334	+		Sama_1976	0.50	-0.7
2,405,335	-		Sama_1976	0.50	+2.1
2,405,417	-		Sama_1976	0.56	-0.6
2,405,420	-		Sama_1976	0.56	+0.4
2,405,420	-		Sama_1976	0.56	-0.5