Strain Fitness in Shewanella amazonensis SB2B around Sama_1711

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,089,930	+				-1.1
2,089,931	-				+0.6
2,089,990	-				+2.0
2,090,053	+		Sama_1710	0.14	+0.0
2,090,171	+		Sama_1710	0.26	-0.5
2,090,172	-		Sama_1710	0.26	+0.9
2,090,233	+		Sama_1710	0.32	-0.5
2,090,261	+		Sama_1710	0.35	-0.3
2,090,300	+		Sama_1710	0.39	+0.9
2,090,324	+		Sama_1710	0.42	+0.2
2,090,325	-		Sama_1710	0.42	-1.0
2,090,358	+		Sama_1710	0.45	+0.1
2,090,447	+		Sama_1710	0.54	-0.5
2,090,483	+		Sama_1710	0.58	-0.5
2,090,838	-				-0.3
2,090,838	-				-1.1
2,090,891	+				+0.1
2,090,891	+				-0.1
2,090,903	-				+2.0
2,090,908	+				-0.1
2,090,918	-				+0.3
2,090,989	+				+0.5
2,090,989	+				+0.9
2,090,990	-				-0.1
2,091,040	-				-0.9
2,091,066	+		Sama_1711	0.10	-1.9
2,091,066	+		Sama_1711	0.10	-0.1
2,091,066	+		Sama_1711	0.10	-1.9
2,091,122	+		Sama_1711	0.14	-0.1
2,091,122	+		Sama_1711	0.14	+1.0
2,091,405	+		Sama_1711	0.32	-1.4
2,091,458	+		Sama_1711	0.35	-1.5
2,091,459	-		Sama_1711	0.35	+0.5
2,091,668	+		Sama_1711	0.48	-0.2
2,091,670	+		Sama_1711	0.48	-1.7
2,091,670	+		Sama_1711	0.48	-0.1
2,091,670	+		Sama_1711	0.48	+0.5
2,091,679	+		Sama_1711	0.49	-0.9
2,091,681	+		Sama_1711	0.49	-0.4
2,091,681	+		Sama_1711	0.49	+1.5
2,091,681	+		Sama_1711	0.49	-1.1
2,091,681	+		Sama_1711	0.49	+1.7
2,091,681	+		Sama_1711	0.49	-0.5
2,091,681	+		Sama_1711	0.49	-0.9
2,091,682	-		Sama_1711	0.49	-0.5
2,091,682	-		Sama_1711	0.49	-0.5
2,091,682	-		Sama_1711	0.49	-1.7
2,091,690	-		Sama_1711	0.50	+0.5
2,091,751	-		Sama_1711	0.54	-0.9
2,091,869	+		Sama_1711	0.61	-1.0
2,091,869	+		Sama_1711	0.61	-0.9
2,091,929	+		Sama_1711	0.65	-0.8
2,091,930	-		Sama_1711	0.65	+0.5
2,092,015	+		Sama_1711	0.70	+1.2
2,092,016	-		Sama_1711	0.70	+3.8
2,092,049	+		Sama_1711	0.72	+0.0
2,092,050	-		Sama_1711	0.72	-1.1
2,092,050	-		Sama_1711	0.72	-0.7
2,092,050	-		Sama_1711	0.72	-0.1
2,092,050	-		Sama_1711	0.72	-1.4
2,092,050	-		Sama_1711	0.72	+0.1
2,092,072	+		Sama_1711	0.74	+0.1
2,092,109	-		Sama_1711	0.76	+2.0
2,092,270	+		Sama_1711	0.86	-1.1
2,092,271	-		Sama_1711	0.86	-0.1
2,092,274	-		Sama_1711	0.87	-1.5
2,092,365	+				+1.5
2,092,365	+				-0.1
2,092,374	+				-0.5
2,092,584	+				-0.4
2,092,585	-				-1.2
2,092,606	+				-1.5