Strain Fitness in Shewanella amazonensis SB2B around Sama_1703

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,082,744	-				-0.9
2,082,757	-				-1.5
2,082,802	-				-1.0
2,082,806	-				+0.9
2,082,818	-		Sama_1702	0.14	-0.1
2,082,818	-		Sama_1702	0.14	-0.3
2,082,838	-		Sama_1702	0.21	-1.5
2,082,838	-		Sama_1702	0.21	-1.1
2,082,890	-		Sama_1702	0.40	+1.3
2,082,896	-		Sama_1702	0.42	-1.2
2,082,896	-		Sama_1702	0.42	+0.1
2,082,905	-		Sama_1702	0.45	+2.3
2,082,905	-		Sama_1702	0.45	+0.5
2,082,946	-		Sama_1702	0.60	-1.4
2,082,946	-		Sama_1702	0.60	-0.4
2,082,946	-		Sama_1702	0.60	-0.4
2,083,068	-				-0.1
2,083,068	-				+0.7
2,083,097	-		Sama_1703	0.16	-0.8
2,083,150	+		Sama_1703	0.40	-1.9
2,083,151	-		Sama_1703	0.41	-1.5
2,083,151	-		Sama_1703	0.41	-1.3
2,083,151	-		Sama_1703	0.41	-0.9
2,083,151	-		Sama_1703	0.41	+0.5
2,083,151	-		Sama_1703	0.41	-2.5
2,083,153	-		Sama_1703	0.41	+1.5
2,083,153	-		Sama_1703	0.41	-1.4
2,083,153	-		Sama_1703	0.41	-1.8
2,083,242	-		Sama_1703	0.82	+0.0
2,083,257	-		Sama_1703	0.88	-0.8
2,083,257	-		Sama_1703	0.88	+0.2
2,083,267	+				+1.1
2,083,268	-				+1.2
2,083,268	-				-0.5
2,083,268	-				-0.8
2,083,269	+				+0.5
2,083,269	+				-1.0
2,083,270	-				-1.0
2,083,270	-				+0.8
2,083,277	+				-1.1
2,083,346	+				-0.4
2,083,347	-				+2.0
2,083,347	-				-0.0
2,083,348	+				-1.5
2,083,349	-				-0.1
2,083,349	-				-0.5
2,083,349	-				+0.3
2,083,349	-				+0.3
2,083,358	+				+0.9
2,083,359	-				-0.1
2,083,359	-				-0.5
2,083,374	-				+0.5
2,083,374	-				+1.2
2,083,388	+				-0.4
2,083,458	-		Sama_1704	0.10	+0.8
2,083,486	+		Sama_1704	0.14	-0.7
2,083,486	+		Sama_1704	0.14	+0.8
2,083,486	+		Sama_1704	0.14	+2.5
2,083,486	+		Sama_1704	0.14	-0.5
2,083,487	-		Sama_1704	0.14	-0.5
2,083,525	+		Sama_1704	0.19	+1.3
2,083,525	+		Sama_1704	0.19	-0.7
2,083,526	-		Sama_1704	0.19	-2.1
2,083,542	+		Sama_1704	0.21	-0.5
2,083,543	-		Sama_1704	0.21	-0.1
2,083,564	+		Sama_1704	0.23	-1.0
2,083,565	-		Sama_1704	0.24	+0.1
2,083,584	+		Sama_1704	0.26	+1.1
2,083,585	-		Sama_1704	0.26	-0.5
2,083,585	-		Sama_1704	0.26	-0.9
2,083,585	-		Sama_1704	0.26	+1.5
2,083,623	+		Sama_1704	0.31	+0.1
2,083,623	+		Sama_1704	0.31	-0.5
2,083,624	-		Sama_1704	0.31	-0.9
2,083,624	-		Sama_1704	0.31	+1.9
2,083,624	-		Sama_1704	0.31	+0.6
2,083,624	-		Sama_1704	0.31	+0.2
2,083,632	-		Sama_1704	0.32	+1.8
2,083,821	+		Sama_1704	0.56	+0.2
2,083,822	-		Sama_1704	0.56	+0.5
2,083,822	-		Sama_1704	0.56	+0.2
2,083,822	-		Sama_1704	0.56	+0.8
2,083,822	-		Sama_1704	0.56	-0.1
2,083,996	+		Sama_1704	0.78	-1.4
2,084,036	-		Sama_1704	0.83	+0.1
2,084,050	-		Sama_1704	0.85	+0.7
2,084,050	-		Sama_1704	0.85	-1.0
2,084,081	+		Sama_1704	0.89	-0.7
2,084,081	+		Sama_1704	0.89	-0.1
2,084,081	+		Sama_1704	0.89	-0.5
2,084,082	-		Sama_1704	0.89	-0.1
2,084,082	-		Sama_1704	0.89	-0.9
2,084,082	-		Sama_1704	0.89	+0.5
2,084,133	-				-0.7
2,084,148	+				+0.1
2,084,149	-				-0.1
2,084,152	+				+0.9
2,084,153	-				+1.2
2,084,153	-				-1.1
2,084,153	-				-1.5
2,084,153	-				+0.5
2,084,153	-				-0.0
2,084,169	+				-1.6
2,084,169	+				+0.5
2,084,169	+				-0.6
2,084,170	-				+0.6
2,084,193	+				-2.0
2,084,194	-				+1.7
2,084,200	+				+0.2
2,084,253	+				-0.5
2,084,253	+				-0.5
2,084,253	+				-0.5
2,084,253	+				+0.1
2,084,254	-				+0.0
2,084,254	-				+2.6
2,084,254	-				+0.0
2,084,254	-				-0.5
2,084,254	-				-1.5